Globicephala melas (long-finned pilot whale): 115840755
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Entry
115840755 CDS
T11080
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf01521
EGFR tyrosine kinase inhibitor resistance
gmf04010
MAPK signaling pathway
gmf04014
Ras signaling pathway
gmf04015
Rap1 signaling pathway
gmf04020
Calcium signaling pathway
gmf04072
Phospholipase D signaling pathway
gmf04151
PI3K-Akt signaling pathway
gmf04510
Focal adhesion
gmf04540
Gap junction
gmf04630
JAK-STAT signaling pathway
gmf04810
Regulation of actin cytoskeleton
gmf05165
Human papillomavirus infection
gmf05200
Pathways in cancer
gmf05206
MicroRNAs in cancer
gmf05214
Glioma
gmf05215
Prostate cancer
gmf05218
Melanoma
gmf05230
Central carbon metabolism in cancer
gmf05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115840755 (PDGFRB)
04014 Ras signaling pathway
115840755 (PDGFRB)
04015 Rap1 signaling pathway
115840755 (PDGFRB)
04630 JAK-STAT signaling pathway
115840755 (PDGFRB)
04020 Calcium signaling pathway
115840755 (PDGFRB)
04072 Phospholipase D signaling pathway
115840755 (PDGFRB)
04151 PI3K-Akt signaling pathway
115840755 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115840755 (PDGFRB)
04540 Gap junction
115840755 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
115840755 (PDGFRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
115840755 (PDGFRB)
05206 MicroRNAs in cancer
115840755 (PDGFRB)
05230 Central carbon metabolism in cancer
115840755 (PDGFRB)
05231 Choline metabolism in cancer
115840755 (PDGFRB)
09162 Cancer: specific types
05214 Glioma
115840755 (PDGFRB)
05218 Melanoma
115840755 (PDGFRB)
05215 Prostate cancer
115840755 (PDGFRB)
09172 Infectious disease: viral
05165 Human papillomavirus infection
115840755 (PDGFRB)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
115840755 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gmf01001
]
115840755 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gmf04090
]
115840755 (PDGFRB)
Enzymes [BR:
gmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115840755 (PDGFRB)
Protein kinases [BR:
gmf01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
115840755 (PDGFRB)
CD molecules [BR:
gmf04090
]
Proteins
115840755 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
ig
I-set
Ig_2
V-set
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
115840755
NCBI-ProteinID:
XP_030689924
LinkDB
All DBs
Position
3:complement(125850644..125889754)
Genome browser
AA seq
1103 aa
AA seq
DB search
MRPPSAMRAPVLEGQVLLLPLLLLLGPRASWGLVITPPGPELVLNLSSTFVLTCSGSAPV
VWERMSQKPPQEMTTSQDGTFSSVLTLTNVTGLDTGEYFCTYKGSHGLEASERKRLYIFV
PDPTVGFLPVDPEELFIFLTEITETTIPCRVTDPRLVVTLHEKKVDVPLPIAYDHQRGFS
GTFEDKTYVCKTTIGDREVDSDAYYVYSLQVSSINVSVNAVQTVVRQGENITIMCIVTGN
EVVNFEWTYPRMESGRLVEPVTDFLFEMPHIRSILHIPSAELGDSGTYICNVSESVSDHR
DEKAINVTVVESGYVRLLGELDPVQFAELHRSRTLQVVFEAYPPPTVMWFKDNRTLGDSG
AGEVALSTRNVSETRYVSELTLVRVKVAEAGRYTMRAFHEDAEAQLSFQLQVNVPVRVLE
LSESHPASGEQTVRCRGRGMPQPHLSWSTCSDLKRCPLELPPTPLGNSSEEESLLETNVT
YWAEEQEFEVVSTLRLRRVDQPLSVRCTLHNLLGQDVQEVTVVPHSLPFKVVVISAILAL
VVLTIISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQLV
LGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPH
LNVVNLLGACTKGGPIFIITEYCRYGDLVDYLHRNKHTFLQRCSNKRRPPSAELYSNALP
VGLRLPSHVSLPGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMAPYDNYVPS
APERTCRVTLINESPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVK
ICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGG
TPYPELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERL
LGEGYKKKYQQVDEEFLRSDHPAVLRSQARLPGFNGLRSPLDTSSVLYTAVQPNEGDNDY
IIPLPDPKPEVADEGPLEGSPSLASSALNEVNTSSTISCDSPLEPQEEPEPEPQPESQVE
PEPKRPPDSSCPGPRAEAEDSFL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctccgagtgccatgcgagctcctgtccttgaaggccaggtgctgttgctgccc
ttgctgttgttgctgggaccacgggcctcctggggcctggtcatcacacccccggggcca
gagcttgtcctcaatctctccagcacctttgttctgacctgctcgggttcagctccagtg
gtgtgggaacggatgtcccagaagcccccacaggaaatgaccacgagccaggacggcacc
ttctccagcgtgctgacactgaccaatgtcactgggctagacacaggagaatacttttgt
acctacaaaggctcccatgggctggaggccagcgagcgaaaacgactctacatctttgtg
ccagatcccactgtgggcttcctccctgttgaccccgaggaactattcatctttctcacg
gaaataactgagaccacaattccatgccgagtgacggacccaagactggtggtgacgttg
catgagaagaaggtggatgtccctctgcccatcgcctatgaccaccaacgtggcttctct
ggtacctttgaggacaagacctacgtctgcaaaaccaccattggggacagggaggtggat
tcggatgcctactatgtctacagcctccaggtgtcatccatcaacgtctcagtgaatgcg
gtgcagactgtggtccgccaaggggagaacatcaccatcatgtgcattgtgactgggaat
gaggtggtcaactttgagtggacatacccacgcatggagagtgggcggctggtggagcca
gtgaccgacttcctctttgaaatgccccacatacgttctatcctgcacatccccagtgcc
gagctgggagactcagggacctacatctgcaatgtatcagaaagtgtgagcgaccatcga
gatgaaaaggccatcaatgtcaccgtggtcgagagcggttacgtgcggctgctgggagag
ctggaccctgtacaattcgcggagcttcaccgcagccggacactgcaggtggtgttcgag
gcctacccgccgcccactgtcatgtggttcaaggacaaccggaccctgggtgactccggc
gccggcgaggttgcgctgtccacgcgcaatgtgtctgagacccggtatgtgtcagaactg
acactggtgcgggtgaaggtggctgaagctggccgctacaccatgcgggccttccatgag
gatgctgaagcccagctctccttccagctgcaggtcaacgtgcctgtccgtgtgctggag
ctgagcgagagccaccctgccagcggcgagcagacagtccgctgtcgtggccggggcatg
ccccagccacacctcagctggtctacctgtagcgacctcaaaaggtgtccgctggagctg
cctcccacgccactggggaacagttccgaggaggagagcctgctggagacgaacgtgaca
tactgggcagaggagcaggagttcgaggtggtgagcacactgcgcctgcgccgtgtggat
caaccgctgtcagtgcgctgcacgctgcacaaccttctgggccaagacgttcaggaggtc
accgtggtgccacattccttacccttcaaggtggtggtgatctcggcaatcctggccttg
gtggtgctcacgatcatctccctcatcatcctcatcatgctctggcagaagaagccacgc
tatgagatccgatggaaagtgattgaatctgtgagctctgatggccatgaatacatctac
gtggaccctatgcagctgccttacgactccacctgggagctgccgcgggaccagcttgtg
cttggacgcaccctgggctccggggcctttgggcaggtggtggaggccacggctcacggc
ctgagccattcgcaggctaccatgaaagtggccgtcaagatgctgaaatccacagcccgc
agcagcgagaagcaagctctcatgtcggagctgaagatcatgagtcacctcgggccccac
ctgaatgtggtcaacctgctgggggcctgcactaaaggagggcccatcttcatcatcacc
gagtactgccgctacggcgacctggtggactacctgcaccgcaacaagcacacctttctg
cagcgctgctccaacaagcgccgcccgcccagcgctgagctctacagcaacgccctgccc
gttgggctccggctgcccagccatgtgtccctgcctggggagagcgatggtggctacatg
gacatgagcaaagatgagtcagtggactacgtgcccatgctggacatgaaaggggacgtc
aaatacgcagacatcgagtcctccaactacatggctccttatgataactacgtcccctcc
gctcctgagaggacctgccgggtgactttaatcaacgagtccccagtacttagctacacg
gatcttgtgggcttcagctaccaggtggccaatggcatggagttcctggcttccaagaat
tgcgtccaccgagatctggcagccaggaatgtgctcatctgtgagggcaaactggtcaag
atctgcgactttggcctggctcgtgacatcatgcgggattcgaactacatctccaaaggc
agtaccttcctgcctctgaagtggatggcccccgagagcatcttcaacagcctctacacc
accctgagcgacgtgtggtccttcgggatcctgctctgggagatcttcaccctgggtggc
accccgtacccagagctgcccatgaacgagcagttctacaatgccatcaagcggggctac
cgcatggcccagcctgcccacgcctctgacgagatctatgagatcatgcagaagtgctgg
gaagagaagtttgagattcggccccccttctcccagctggtgctgcttctcgagagactg
ctgggcgagggttacaaaaagaagtaccagcaggtggatgaggagtttctgaggagcgac
cacccagccgtccttcggtcccaagcccgcttgcccggcttcaatggcctccgatccccc
ctggacaccagctccgtcctctacactgctgtgcagcccaacgagggtgacaacgactat
atcatccccctgcctgaccccaaacccgaggttgctgatgagggaccactggagggttcc
cccagccttgccagctccgccctgaatgaagtcaacacctcctctaccatctcctgtgac
agccccctggaaccccaagaggaaccagagccagagccccagcctgagtcccaggtggag
ccagagcccaagcggccgccggattccagctgccctgggcctcgggccgaggcggaggac
agcttcctgtag
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integrated database retrieval system
