Globicephala melas (long-finned pilot whale): 115841026
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Entry
115841026 CDS
T11080
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4
KO
K06454
T-cell surface glycoprotein CD4
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03250
Viral life cycle - HIV-1
gmf03260
Virion - Human immunodeficiency virus
gmf04060
Cytokine-cytokine receptor interaction
gmf04514
Cell adhesion molecule (CAM) interaction
gmf04612
Antigen processing and presentation
gmf04640
Hematopoietic cell lineage
gmf04658
Th1 and Th2 cell differentiation
gmf04659
Th17 cell differentiation
gmf04660
T cell receptor signaling pathway
gmf05135
Yersinia infection
gmf05166
Human T-cell leukemia virus 1 infection
gmf05170
Human immunodeficiency virus 1 infection
gmf05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
gmf05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115841026 (CD4)
03260 Virion - Human immunodeficiency virus
115841026 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115841026 (CD4)
04514 Cell adhesion molecule (CAM) interaction
115841026 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
115841026 (CD4)
04612 Antigen processing and presentation
115841026 (CD4)
04660 T cell receptor signaling pathway
115841026 (CD4)
04658 Th1 and Th2 cell differentiation
115841026 (CD4)
04659 Th17 cell differentiation
115841026 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
115841026 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
115841026 (CD4)
05170 Human immunodeficiency virus 1 infection
115841026 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
115841026 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
115841026 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gmf04090
]
115841026 (CD4)
CD molecules [BR:
gmf04090
]
Proteins
115841026 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
Tcell_CD4_C
ig
Ig_3
V-set
Ig_2
I-set
Receptor_2B4
Ig_5
Sp38
Izumo-Ig
Motif
Other DBs
NCBI-GeneID:
115841026
NCBI-ProteinID:
XP_030690443
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All DBs
Position
10:complement(96235178..96248631)
Genome browser
AA seq
455 aa
AA seq
DB search
MDPGTSLRHLFLVLQLVMLPAGTQGKKVVLGKAGELAELPCKASQNKSLFFSWKNSYQTK
ILGRHGYFWHKGASNLNSRVESKINLWDQGSFPLVIKDLEVPDSGTYICEVEDKKLEVEL
QVFRLTASSDTRLLLGQSLTLTLEGPSGSNPSVQWKGPGNKRKNEAKSLSLPQVGLQDSG
TWTCTVSQAQQTLVFNKHILVLAFQEVSSTVYAKEGEQMNFSFPLTFGDENLSGELSWLQ
AKGNSSPESWITFTLNNGKVTVGKARKDLKLRMSKGLPLHLTLPQALPQYAGSGNLTLNL
TKGKLYQEVKLVVMRVTKSPNSLTCEVLGPTSPRLTLSLKKENQSMRVSDQQKLVTVLGP
EAGMWQCLLSDKGKVLLESKVKILPPVLARAWPKLLAVVLGGVASLLLLTGFCIFSAKYW
HRRRRAQRTSQIKRLLSEKKTCHCSHRLQKTCSLT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggaccccggaacctctcttaggcacctgttcctggtgctgcaactggtgatgctccca
gccggcactcaggggaagaaagtggtgctgggtaaggcaggagaactcgcagagctgccc
tgcaaggcttcccagaataagagcctgttcttcagctggaaaaattcttaccagaccaag
attctggggcgtcacggctacttctggcacaaaggtgcctccaacctgaactctcgagtc
gaatcaaaaataaacctgtgggaccaaggatcctttcctctggtcatcaaggatcttgaa
gtacctgactcggggacttacatctgcgaagtggaggacaagaagctcgaggtggaattg
caggtgttcagactgactgccagctcggacacccgcttgctgctgggacagagcctgacc
ctgaccttggaaggcccctctggtagtaacccttcagtgcaatggaaaggtccagggaat
aaaaggaagaatgaggccaagagtctgtcactgccccaggtggggctgcaggacagtggc
acctggacatgtaccgtctcccaggcccagcagacgctggtgttcaacaagcacatcctg
gtgctggccttccaagaggtctccagcacagtctatgcaaaggagggggagcagatgaac
ttttccttcccactcacattcggagatgaaaatctgagcggggagctgagttggctgcag
gcaaaggggaattcctcccccgagtcctggatcaccttcacattgaacaacgggaaggtg
actgtgggaaaggctcgcaaggacctcaagctccgcatgagtaaggggctccccctccac
ctgactctgccccaggccttgcctcagtatgcaggttctggaaacctgaccctgaatctc
accaaggggaagttgtatcaggaagtgaagctcgtggtgatgagagtgactaagtcccca
aacagtttgacctgtgaggtgctgggacccacgtcccccaggctgacactgagcttgaag
aaggagaaccagagtatgagggtctcagatcagcagaagctggtgacggtgctgggccct
gaagcaggcatgtggcagtgtctactgagcgacaagggcaaagtcctgctggaatccaag
gtcaagattttgcccccggtgctcgcccgcgcctggccgaagcttctggctgtggtgctg
gggggggtcgccagtcttctgcttctcactggattttgcatcttctctgctaaatactgg
caccgcaggcgccgggcacagcggacatctcagatcaagagactcctcagtgagaagaag
acctgccactgctcgcaccggctccagaagacatgtagtctcacctga
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