Globicephala melas (long-finned pilot whale): 115841623
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Entry
115841623 CDS
T11080
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04360
Axon guidance
gmf04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
115841623 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
115841623 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmf01009
]
115841623 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmf04040
]
115841623 (TRPC5)
Protein phosphatases and associated proteins [BR:
gmf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115841623 (TRPC5)
Ion channels [BR:
gmf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115841623 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
115841623
NCBI-ProteinID:
XP_030691590
LinkDB
All DBs
Position
X:33098973..33364735
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AA seq
974 aa
AA seq
DB search
MAQLYYKRVNYSPYRDRIPLQIVRAETELSAEEKAFLSAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKMENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIIRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPQRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHQRRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKACHGPPLIRTMPRVGGAQGKSKAESSSKRSFMG
PSLKKLGLLFSKFNGHMSEPSSEPMYTISDGIVQPHYMWQDIKYSQMEKGKAESCSQSEI
NLSEVELGEARGAAQSSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctgtactacaaaagggtcaactactcaccctacagagaccgaatccccctg
caaattgtgagggctgagacggagctctctgcagaggagaaggccttcctcagtgccgtg
gagaagggggactacgccactgtgaagcaggccctccaggaggccgagatctactacaat
gtcaacatcaactgcatggacccactgggccggagcgccctgctcattgccattgagaat
gagaacctggagatcatggagctactgctgaaccacagcgtgtacgtcggtgacgcattg
ctctacgccatccgcaaggaagtggtgggcgctgtggagcttctgctcagctacaggcgg
cccagtggagagaagcaggtccccactctgatgatggacacccagttctctgagttcaca
ccggacataactcccatcatgcttgctgcccacaccaacaactacgaaatcatcaaattg
ctcgtccaaaaacgggtcactatcccccggccccaccagatccgctgcaactgtgtggag
tgtgtgtccagttcagaggtagacagcctgcgccactcccgctcccggttgaacatctat
aaagcgctggcaagcccctcactcatcgccttatcaagcgaggaccccatcctaactgcc
ttccgcctgggctgggagctcaaggagctcagcaagatggagaatgagttcaaggctgag
tatgaggagctctcccagcagtgcaagctctttgccaaagacctgctggaccaggctcgg
agctcccgggaactggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcaaaagtaccatgacctagccaagctgaaggtggccatcaaataccatcagaaagag
tttgtggcccagcccaactgccaacagttgcttgccactctgtggtacgatggcttccct
ggatggcggcggaaacactgggtagtcaagcttctgacgtgcatgaccattgggttcctg
tttcccatgctgtctattgcttatctgatctcacccaggagcaaccttgggctgttcatc
aagaaaccctttatcaagtttatctgccacacagcctcatatctgaccttcctcttcatg
cttctcctggcttctcagcacatcatcaggacggacctccatgtgcaggggcctcccccg
actgtagtggaatggatgatattgccttgggttctcggtttcatttggggggagattaag
gagatgtgggacggtggatttactgaatacatccatgattggtggaacctgatggatttt
gcaatgaactcactctacctggcaactatttccctgaagatcgtggcctatgtcaagtat
aatggttctcgtccaagggaagaatgggaaatgtggcacccaactctgattgcagaagct
ctctttgcgatatccaacattttaagttcgttgcgtctcatatccctcttcacagccaac
tcccacttagggcctctgcagatctctttggggcgcatgttgcttgatatcctcaaattc
ctctttatctactgcctggtactgctggcttttgccaatggattgaaccagctttacttt
tattatgagaccagagcaatcgatgagcccaacaactgcaaggggatccgatgcgagaaa
cagaacaatgccttctccacgctctttgaaacccttcagtcactcttctggtctgtattc
ggccttttgaatctctatgttaccaatgtaaaagccagacacgagttcacagagtttgtg
ggagcgaccatgtttgggacgtacaatgtcatctccctggtagtgctgctgaacatgctg
atcgccatgatgaacaactcctaccagcttattgccgatcatgccgatattgagtggaag
tttgcaaggacgaagctctggatgagttacttcgatgaaggcggcaccttgccacctcct
ttcaacatcatccccagccccaagtcatttctataccttggtaactggttcaacaacacc
ttctgcccccaaagagaccctgatggtagacggagaaggcacaacttgagaagcttcaca
gaacgccatgctgacagcctgatacagaatcaacattaccaggaagttatcaggaattta
gtcaaaagatatgtggcagctatgataagaaattccaaaacaaatgagggactcacagaa
gaaaattttaaggaattaaagcaggacatttccagctttcgatatgaagtgcttgacctc
ttaggaaataggaagcaccaaaggagaagtttttccactagcagcactgaactctctcag
agagatgataccaatgatggcagtggcggggctcgggccaaatccaagagtgtctctttc
aatttaggctgcaagaaaaaagcctgccatgggccacctctcatcaggaccatgccaaga
gttggtggtgcccaagggaagtcaaaagctgagtcatcaagcaaacgctccttcatgggt
ccctctctcaagaaactgggtctcctattctccaagtttaatggtcatatgtctgaaccc
agttcagagccgatgtacacaatttctgatggaatcgttcagccgcactatatgtggcag
gacatcaaatattctcagatggagaaagggaaagcagagtcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagcccggggcgctgctcagagcagtgaatgccct
ctagcctgttccagctctcttcactgcgcatccagcatctgctcctcaaattctaaactt
ttagactcctcagaggatgtatttgaaacttggggagaggcttgtgacctgctcatgcac
aaatggggtgacggacaggaagaacaagttacaactcggctctaa
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