Globicephala melas (long-finned pilot whale): 115844183
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Entry
115844183 CDS
T11080
Symbol
TAP1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf02010
ABC transporters
gmf04145
Phagosome
gmf04612
Antigen processing and presentation
gmf05163
Human cytomegalovirus infection
gmf05168
Herpes simplex virus 1 infection
gmf05169
Epstein-Barr virus infection
gmf05170
Human immunodeficiency virus 1 infection
gmf05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115844183 (TAP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115844183 (TAP1)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
115844183 (TAP1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
115844183 (TAP1)
05168 Herpes simplex virus 1 infection
115844183 (TAP1)
05163 Human cytomegalovirus infection
115844183 (TAP1)
05169 Epstein-Barr virus infection
115844183 (TAP1)
09163 Immune disease
05340 Primary immunodeficiency
115844183 (TAP1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115844183 (TAP1)
Enzymes [BR:
gmf01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
115844183 (TAP1)
Transporters [BR:
gmf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
115844183 (TAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_21
AAA_29
AAA_22
AAA_23
AAA_15
AAA_25
Zeta_toxin
AAA_30
AAA_5
SRP54
APS_kinase
AAA_33
Motif
Other DBs
NCBI-GeneID:
115844183
NCBI-ProteinID:
XP_060163464
LinkDB
All DBs
Position
11:complement(62678614..62710266)
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AA seq
750 aa
AA seq
DB search
MACSESPAPCGCLRLSRASLACLGTALLLLADWMLLRLALPRIASLLVPPALPLLSVWVA
GLSRWAVLWLGARGVLGAALGFRRESAGVRGWLAALEPLAAALGLALPGLASFRELRSWG
APGDAHSTRPLHWGSRLDAFALSYTAALPAAALWHKIRSLWVQGAHSASGVAVRRLLGFL
GPEIQRLPLLLALVVLSCLGEMAVPFFTGRFTDWILQDRTGAAFARNITLMSVLTIASAV
LEFTADGIYNSTMGRVHCHLQGEVFRAVLCQKTEFFQKNQTGAITSRVTEDTSTVSESLS
LDLSLFLWYLCRGLCLLGLMLWGSPSLTMVTLLALPLLFLLPEKLGKWHKVLAAQVQESL
AKSSQVAIEVLSAMPTVRSFANEEGEAQKFRQKLHEMKTLNQKEALAYAVNLWTTRISGL
LLKVGILYFGGQLVTSGSVSSGHLVAFVLYQNQFTTAVEVLLSTYPRLQKAVGSSEKIFE
YLDQIPHCPASGVFTSLKLQGLVQFQGVSFAYPNRLDVPVLQGLTFTLRPGEVTALVGPN
GSGKSTVAALLQNLYQPTEGQVLLDGEPLPKYEHCYLHRQVAAVGQEPQLFGRSFKENIA
YGLVQKPTMEDITAAAVESGAHGFISVLPQGYDTEVGEAGGQLSGGQRQRVALARALIRK
PCVLILDDVTSALDINSQSCVEELLYKSPERCSRSVLLITQRLSLVKQAHHILFLEGGTI
IEAGTHQQLMANKGRYCTMVQAPGGSGAPE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggcctgctcggagtcccccgctccctgcgggtgtctccgcctctcccgagcctccctc
gcgtgcctggggacagcgctgctgctcctcgccgactggatgctgctccggctggcgctg
cctcgaatagcctccctgctggtaccccctgcgctgccgctgctcagtgtctgggtggcg
ggcctgagccgctgggcggtactgtggctgggagcccgaggcgtcctcggggcagcgctg
ggcttccggagagaaagcgcaggagtccggggatggctggctgctttggagccgctggcg
gcggcgctgggcttggctctgccgggacttgcctcgttccgagagctgcgctcgtgggga
gcccccggggacgctcacagcacccggccactgcactgggggagtcgcctggacgccttt
gcgctcagttacacggcggcactgcccgcggccgccctgtggcataagatcaggagcctt
tgggtgcaaggagctcacagcgcttctggagtggcggtgagacggcttctaggcttcctg
ggcccagagatacaacgcctgccgctccttctggccctggtggtactctcctgtcttggg
gagatggctgttccattcttcacgggccgtttcacggactggattctacaagacaggaca
ggcgctgcctttgcgcgaaacataactctcatgtctgtcctcaccatagccagtgcagtg
ctggagttcacggctgatggaatctacaacagcaccatgggccgtgtgcactgccacctg
cagggagaggtgtttcgggctgtcctgtgccagaaaacagagttttttcaaaagaaccaa
acaggtgccatcacatctcgggtcacagaggacacatccaccgtgagtgagtctctgagt
ttggacctgagcctctttctgtggtacctctgccgtggactgtgtctcttggggctcatg
ctctggggctccccgtccctcaccatggtcaccctgctcgccctgccactacttttcctt
ctgcctgagaagctgggaaaatggcacaaggtgctggcagcacaggtgcaggaatctctg
gcaaaatccagccaggtggccattgaggtgctgtcagccatgcctacagtccggagcttt
gccaacgaagagggtgaggcccagaagttcaggcaaaagctgcatgaaatgaagacactc
aaccagaaggaggccctggcctacgcggtcaacctctggaccacccgtatctcaggattg
ctgctgaaggtgggaatcctgtattttggtgggcagctggtgacaagtgggtctgtaagc
agtgggcacctggtcgcctttgttctttaccagaaccagttcaccacagctgttgaggta
ctgctgtccacctatcccaggctacagaaggctgtgggctcttcagagaaaatatttgaa
tacctggaccagatccctcactgcccagccagtggtgtgttcacttccttaaagttgcag
ggcctcgtccagttccagggtgtctccttcgcctacccaaaccgtctagatgtcccagtg
ctgcaggggctgacgttcacccttcgtcctggtgaggtgacggcgctggtggggcccaat
gggtctgggaagagcacagtggctgccctgctgcagaatctgtaccagcccaccgagggg
caggtgctcctggacggggagccccttcccaaatatgagcactgctacctgcacagacag
gtggctgctgtgggacaagagccacagctatttggaagaagctttaaagaaaatattgcc
tatggcctggtccagaagccaaccatggaggacatcacagctgctgcagtggagtccgga
gcccacgggttcatctctgtactccctcaaggctacgacacagaagtaggtgaggctggg
ggccagctgtcagggggtcagcgacagagagtggccttggctcgagccttgatccggaaa
ccgtgtgtactcatcctggatgatgttaccagtgccctggatataaacagccagtcctgt
gtggaggagctcctgtataaaagccctgagcggtgctctcggtctgtgcttctcatcacc
cagcgcctcagcttggtgaagcaggctcaccacatcctctttctggaaggaggcaccatc
attgaggcaggaacccaccagcagctcatggcgaataagggacgctattgcaccatggtt
caggctcctggtgggtcaggtgctccagaatga
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