Globicephala melas (long-finned pilot whale): 115845442
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Entry
115845442 CDS
T11080
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf00514
Other types of O-glycan biosynthesis
gmf04330
Notch signaling pathway
gmf05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115845442 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115845442 (RFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
115845442 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gmf01003
]
115845442 (RFNG)
Enzymes [BR:
gmf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115845442 (RFNG)
Glycosyltransferases [BR:
gmf01003
]
Glycan extension
O-Glycan
115845442 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
115845442
NCBI-ProteinID:
XP_030699235
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All DBs
Position
20:complement(33065213..33068805)
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AA seq
336 aa
AA seq
DB search
MSRARGALCRACLALAAALAALLLLPLPLPRAPAPAPTRAPAPGPGPHAPPARPATAPRL
RPDDVFIAVKTTRKNHGPRLGLLLRTWISRARRQTFIFTDGDDPELQLQEGSHVVNTNCS
AVHTRQALCCKMSVEYDKFIESGRKWFCHVDDDNYVNPEGLLQLLSTFSPSQDVYLGRPS
LDHPIEATERVQGGGTVTTVKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLP
DDCTVGYIVEGLLGARLLHSSLFHSHLESLQRLPPDTLLQQVTLSYGGPENPHNVVNVAG
GFSLQQDPTRFKSVHCLLYPDTDWCPEQKQSDVASR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgcggggggcgctgtgccgggcctgcctcgcgctggccgcggccctggcc
gcgctgctgctgctgccactgccgctaccccgcgcgcccgcgccggccccgacccgggcc
ccggcccccggccccggcccacacgctccccctgcccgtcccgccaccgccccccgcctg
cggcccgacgacgtcttcatcgcggtcaagaccacccggaagaaccacgggccgcgcctg
ggtctgctgctgcgcacctggatctcccgggcccgacggcagacgttcatctttaccgac
ggggatgaccctgagctacagctccaggaaggcagccatgtcgtcaacaccaactgctca
gccgtgcacacacgccaggctctgtgctgcaagatgtcagtggaatatgacaagttcatt
gagtctggacgcaagtggttctgccatgtggacgatgacaactacgtaaaccccgaaggc
ctgctgcagctgctgtccaccttctcacccagccaagacgtctacctggggcggcccagc
ctggaccaccccatcgaggctaccgagagggtccaaggaggtggaaccgtaaccacggtc
aagttctggtttgctaccggaggggccgggttctgcttgagcagaggccttgcactcaag
atgagcccatgggccagcctgggcagtttcatgagcacagccgagcgggtgcggctgccg
gacgactgcacggtgggctacattgtggaggggctgctgggcgcccgcctgttgcacagc
tcgctgttccactcccacctggagagcctgcagaggctgccgcccgacaccctgctccag
caggtcaccttgagctacgggggtcctgagaacccacataatgtggtgaacgtggccgga
ggcttcagcctgcagcaggaccccacgcggtttaagtccgtccactgccttctttacccg
gacacggactggtgtcctgagcagaagcagagtgacgtcgcctctcggtga
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