KEGG   Globicephala melas (long-finned pilot whale): 115845820
Entry
115845820         CDS       T11080                                 
Symbol
CXCL12
Name
(RefSeq) stromal cell-derived factor 1 isoform X1
  KO
K10031  C-X-C motif chemokine 12
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04060  Cytokine-cytokine receptor interaction
gmf04061  Viral protein interaction with cytokine and cytokine receptor
gmf04062  Chemokine signaling pathway
gmf04064  NF-kappa B signaling pathway
gmf04360  Axon guidance
gmf04670  Leukocyte transendothelial migration
gmf04672  Intestinal immune network for IgA production
gmf04810  Regulation of actin cytoskeleton
gmf05163  Human cytomegalovirus infection
gmf05200  Pathways in cancer
gmf05323  Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    115845820 (CXCL12)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    115845820 (CXCL12)
   04061 Viral protein interaction with cytokine and cytokine receptor
    115845820 (CXCL12)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    115845820 (CXCL12)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    115845820 (CXCL12)
   04672 Intestinal immune network for IgA production
    115845820 (CXCL12)
   04062 Chemokine signaling pathway
    115845820 (CXCL12)
  09158 Development and regeneration
   04360 Axon guidance
    115845820 (CXCL12)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    115845820 (CXCL12)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    115845820 (CXCL12)
  09163 Immune disease
   05323 Rheumatoid arthritis
    115845820 (CXCL12)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:gmf04052]
    115845820 (CXCL12)
   00536 Glycosaminoglycan binding proteins [BR:gmf00536]
    115845820 (CXCL12)
Cytokines and neuropeptides [BR:gmf04052]
 Cytokines
  Chemokines
   115845820 (CXCL12)
Glycosaminoglycan binding proteins [BR:gmf00536]
 Heparan sulfate / Heparin
  Chemokines
   115845820 (CXCL12)
SSDB
Motif
Pfam: IL8
Other DBs
NCBI-GeneID: 115845820
NCBI-ProteinID: XP_030699896
LinkDB
Position
16:complement(44579972..44608327)
AA seq 119 aa
MDAKIVAVLALVLAALCLSDGKPVSLSYRCPCRFFESHVARANVKHLKILNTPNCALQIV
ARLKNNNRQVCIDPKLKWIQEYLEKALNKGRREEKVGKREKIGKKKRQKKRKAAQKRKN
NT seq 360 nt   +upstreamnt  +downstreamnt
atggatgccaagatcgtcgctgtgctggctcttgtgctggctgcgctgtgcctcagcgac
gggaaaccggtcagcctgagctacagatgcccttgccgattctttgagagccacgtcgcc
agagccaatgtcaagcatctcaaaatcctcaacactccgaattgtgcccttcaaatcgtg
gcaaggctgaagaacaacaacagacaagtgtgcatcgacccgaaattgaagtggattcag
gaatacctggagaaagctttaaacaaggggcgcagagaagaaaaagtggggaaaagagaa
aagataggaaaaaagaagcgacagaagaagagaaaggctgctcagaaaaggaaaaactag

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