Globicephala melas (long-finned pilot whale): 115846230
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Entry
115846230 CDS
T11080
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1 isoform X2
KO
K14381
sequestosome 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04137
Mitophagy - animal
gmf04140
Autophagy - animal
gmf04217
Necroptosis
gmf04218
Cellular senescence
gmf04380
Osteoclast differentiation
gmf05014
Amyotrophic lateral sclerosis
gmf05022
Pathways of neurodegeneration - multiple diseases
gmf05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115846230 (SQSTM1)
04137 Mitophagy - animal
115846230 (SQSTM1)
09143 Cell growth and death
04217 Necroptosis
115846230 (SQSTM1)
04218 Cellular senescence
115846230 (SQSTM1)
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
115846230 (SQSTM1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115846230 (SQSTM1)
05022 Pathways of neurodegeneration - multiple diseases
115846230 (SQSTM1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
115846230 (SQSTM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115846230 (SQSTM1)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115846230 (SQSTM1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmf04147
]
115846230 (SQSTM1)
Membrane trafficking [BR:
gmf04131
]
Autophagy
Mitophagy
Cargo receptors
115846230 (SQSTM1)
Pexophagy
115846230 (SQSTM1)
Aggrephagy
115846230 (SQSTM1)
Xenophagy
115846230 (SQSTM1)
ER-phagy
ER-phagy recepters
115846230 (SQSTM1)
Other autophagy associated proteins
Midbophagy
115846230 (SQSTM1)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
115846230 (SQSTM1)
Exosome [BR:
gmf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115846230 (SQSTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
PB1
ZZ
Motif
Other DBs
NCBI-GeneID:
115846230
NCBI-ProteinID:
XP_030700647
LinkDB
All DBs
Position
3:complement(153865825..153878017)
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AA seq
440 aa
AA seq
DB search
MASLTVKAYLLGKEDAAREIRRFSFCFSAEPEAEAESTAGPRPCERLLSRVAALFPVLRP
GGFQAHYRDEDGDLVAFSSDEELKMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEVPRN
MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGMHREHSKLAFPSPFGRPSEGFS
HSRWLRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDAHPGPAAESASGPSEDPSVNFLKNV
GESVAAALSPLGIEVDIDVEHGGKRSRLTPTSPGSSTPEEKCSSQTSSCCSNPSKPDGDV
EGMAQSLVEQVNKIALESGGQPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPE
SEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTK
DYDIGAALDTIQYSKHPPPL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctcaccgtgaaggcctaccttctgggcaaggaggacgcagcccgcgagatc
cgccgcttcagcttctgttttagcgcggagcccgaagcggaagctgagtccacagctggc
ccgcggccctgcgagcggctgctgagccgggtggccgccctgttccccgtactacggccc
ggcggcttccaggctcactaccgcgatgaggacggggacttggttgccttttccagtgac
gaggaactgaagatggcgatgtcatatgtgaaggatgacatcttccgtatttacattaaa
gagaagaaggagtgccggcgggaccaccgacccccgtgtgctcaggaggtgccccgaaac
atggtgcaccccaacgttatctgtgatggttgcaacgggccagtggtggggacccgctac
aagtgcagcgtctgtcctgactacgatctatgctctgtctgcgaggggaagggcatgcac
agggagcacagcaagcttgccttccccagccccttcgggcgcccttctgagggcttctct
cacagccgctggctgcggaagctgaaacacgggcactttgggtggcctggctgggagatg
ggcccaccggggaactggagcccacgtcctcctcgagcaggggatgcccaccctggccct
gctgcagaatcagcttctggtccatcggaggatcccagtgtgaatttcctcaagaatgta
ggggagagtgtggcagctgccctcagccctctgggcattgaagtcgatattgacgtggaa
catggaggaaagagaagccgcctgacacccacctccccaggcagctccaccccagaggag
aagtgtagctctcagacaagcagctgctgttccaaccccagcaagccagacggggacgtg
gaaggcatggcacagtctctggtggagcaagtgaacaagatcgccctggagtcagggggt
cagcctgaggaacagatggagtctgataactgttcaggaggagatgatgactggactcat
ttgtcttcaaaagaggtggacccgtctacaggtgaactccagtctttacagatgcctgaa
tctgaagggccaagctctctggacccttcccaggaaggacccacagggctgaaggaagct
gcattgtacccacatctgccaccagaagctgacccccggctgattgagtccctctcccag
atgctatccatggggttctctgatgaaggcggctggctcaccaggctcctacagaccaag
gattatgacatcggggctgccctagacaccatccagtattcaaaacacccaccgccgttg
tga
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