Globicephala melas (long-finned pilot whale): 115846995
Help
Entry
115846995 CDS
T11080
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf00310
Lysine degradation
gmf01100
Metabolic pathways
gmf04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115846995 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
115846995 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115846995 (SETDB1)
Enzymes [BR:
gmf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
115846995 (SETDB1)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115846995 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
115846995 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
115846995
NCBI-ProteinID:
XP_030702274
LinkDB
All DBs
Position
1:complement(79568330..79598918)
Genome browser
AA seq
1296 aa
AA seq
DB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCIQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASTLEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPTAPPAPPAPPAPPAPPGPPLSPQAGD
SESLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGISQTHRSPLGS
TTSAPAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQYR
GKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFL
EMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGK
GVFINTGAEFLVGCDCKDGCRDKSKCTCHQLTVQATACTPGGQINSNSGYQYKRLEECLP
TGVYECNKRCNCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGK
ILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDVPCSSDSSGVDLKDQEDGNSGT
EDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMPSKDSRPPDLGPP
RVPVPPSIPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGHAG
GGRGEAEKASTSGLGFKDEGDIKQPKKEDPDDRNKMSVVTESSRNYGYNPSPVKTEGLRR
PPSKTSMHQSRRLMASAQSNPDDILTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQT
ISSGSEGDDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRK
NTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRI
RAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtctgaa
gagattgcagagctgcaacaagcagtggttgaggagctgggtatatctatggaggaactt
cggcagttcattgatgaagaactggaaaagatggactgtatacagcagcgcaagaagcaa
ctagcagagttggagacatgggtaatacagaaggaatctgaggtggcccatgttgaccag
ctgtttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttttac
tccaaactgggactacagtaccgggacagtagttctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaagatgtccagaagttcatggacgctgtcaacaagaagagcagttcccaggatcta
cacaaaggaaccttgagtcaaatgtctggagaattgagtaaagatggtgacctggtggtt
agcatgcgcattctgggcaagaagagaactaagacgtggcacaaaggcacccttattgcc
atccagacggttgggccagggaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcagggaaccatattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctacgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttctttgatgacggc
tacgcttcctatgttacacagtctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaggagtatatcactgcttac
cccaaccgccccatggttttgctcaagagtggacagcttatcaagactgagtgggaaggc
acgtggtggaagtcccgagttgaggaggtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacggctggagcccatgttcagc
atgaagacatcctcagcctctacgctagagaagaagcaaggcggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggtcccgtggtccagtacactcaggatctgacc
agtactggaacccagttcaagccagtggagccccctcagcctacagctccacctgcccca
cctgccccacctgccccacctgccccacctggtccacctctgtccccccaggcaggtgac
agtgaaagcttggaaagccagcttgcccaatctcggaagcaggtagccaaaaaaagcaca
tccttccggccaggatctgtgggctctggtcattcctcccctacatcgcctgcactcagt
gaaaatgctcctggtgggaaacctgggatcagtcagacacatagatcacctttaggatcc
acaacctctgccccagcacccccagctcccccagcacccccagccttccatggcatgctg
gagcgggccccggcagagccctcctaccgcgcccccatggagaagcttttctacttacct
catgtctgcagctatacttgtctgtctcgagtcagacctatgagaaatgagcagtatcgg
ggcaagaaccctctcctagtcccactactgtatgacttccggcggatgacagcccggcgc
cgagttaaccgcaagatgggctttcatgttatctataagacaccctgtggcctctgcctt
cggacaatgcaagagattgagcgctacctttttgagacaggctgtgacttcctcttcctg
gagatgttctgtttggatccatatgttcttgtggaccgaaagtttcagccctataagcct
ttttactatattttggacatcacctatgggaaggaagatgttcctctgtcctgtgtcaat
gagattgacacaactcccccacctcaggtggcctacagcaaggaacgaatcccaggcaag
ggtgttttcattaacacaggcgctgaatttctggttggctgtgactgcaaagatgggtgc
cgggacaagtccaagtgtacctgccatcagctaactgtccaggctacagcctgtacccca
ggcggccaaatcaactctaactctggctaccagtacaagagactagaagagtgtcttccc
acaggagtttatgagtgtaacaaacgctgcaattgtgacccaaacatgtgcacaaaccgg
ttggtgcagcatggactgcaggttcgactgcagctcttcaagacccagaacaagggctgg
ggtatccgctgcttggatgacattgccaaaggctcttttgtctgtatctatgcaggcaaa
atcctgacagatgactttgccgacaaggagggcctggaaatgggtgatgaatattttgcc
aatctggaccatatcgagagcgtggagaacttcaaggaaggatatgagagtgatgtcccc
tgttcctctgacagcagtggtgtagacttgaaggaccaggaagatggcaacagcggtaca
gaggaccccgaagagtccaatgacgatagctcagatgataacttctgtaaggatgaggac
ttcagcaccagctcggtgtggcgcagctatgctacccggcggcagacccggggccagaag
gagaatggattgtctgagatgccttccaaggactctcgccccccagaccttgggccccca
cgtgttcctgtccctccatcgatccctgtaggtggctgcaatccaccttcctctgaagag
acacccaagaacaaagtggcctcgtggttgagctgcaatagtgtcagtgaaggtggcttt
gctgactctgatagccgttcatccttcaaaactagtgaaggtggggaaggtcacgctggg
ggaggcagaggggaggctgagaaggcttccacctcagggctgggcttcaaggatgagggt
gacatcaagcagcccaagaaagaggaccctgatgaccggaacaagatgtcagtagttact
gaaagctctcgaaattatggttacaatccttctcccgtgaagactgaaggacttcgccgc
ccaccaagtaagactagcatgcatcagagccgacgactcatggcctctgctcagtcaaac
cctgacgacatcctgacactgtccagcagcacagaaagtgagggggaaagcgggaccagc
cgaaagcccactgctggtcagacttcagccacagccgttgacagtgatgatatccagacc
atctcctctggctctgaaggggatgactttgaggacaagaagaacatgtctggtccaatg
aagcgccaagtggcagtaaaatcaacccggggttttgctcttaaatcaacccatgggatt
gccattaaatcaaccaacatggcatccgtggaaaagggagagagtgcacctgttcgaaag
aacacacgccaattctacgatggggaggagtcttgctacatcatcgatgccaagcttgaa
ggcaacctgggccgctacctcaatcacagctgcagccccaacctgtttgtccagaatgtc
ttcgtggatactcatgatcttcgcttcccatgggtggccttctttgccagcaagagaatc
cgggctgggacagaactcacctgggactacaactacgaggtgggcagcgtggagggcaag
gagctgctttgctgctgtggggccatcgaatgcagagggcgtcttctttag
DBGET
integrated database retrieval system
