Globicephala melas (long-finned pilot whale): 115848680
Help
Entry
115848680 CDS
T11080
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03018
RNA degradation
gmf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115848680 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
115848680 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115848680 (LSM3)
03041 Spliceosome [BR:
gmf03041
]
115848680 (LSM3)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115848680 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
115848680 (LSM3)
Spliceosome [BR:
gmf03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115848680 (LSM3)
Complex C
U2 snRNP components
115848680 (LSM3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
RimP_C
Motif
Other DBs
NCBI-GeneID:
115848680
NCBI-ProteinID:
XP_030705395
LinkDB
All DBs
Position
11:3329863..3339710
Genome browser
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacgtggaccagcaacaaactaccaacactgtagaagagcctctggatctc
atcaggctcagtcttgatgaacgaatctatgtgaaaatgagaaatgacagagagcttcga
ggcaggttacatgcctatgatcagcatttaaatatgatattgggagatgtggaagaaact
gtgacgacgatagaaattgatgaagaaacatatgaagagatatataaatcaacaaaacgg
aatattccgatgctctttgtccggggagacggtgttgtgctagttgccccaccattgaga
gttggttga
DBGET
integrated database retrieval system
