Globicephala melas (long-finned pilot whale): 115848706
Help
Entry
115848706 CDS
T11080
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf00514
Other types of O-glycan biosynthesis
gmf04330
Notch signaling pathway
gmf05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115848706 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115848706 (LFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
115848706 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gmf01003
]
115848706 (LFNG)
Enzymes [BR:
gmf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115848706 (LFNG)
Glycosyltransferases [BR:
gmf01003
]
Glycan extension
O-Glycan
115848706 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
DUF6895
Motif
Other DBs
NCBI-GeneID:
115848706
NCBI-ProteinID:
XP_030705463
LinkDB
All DBs
Position
15:1724040..1732201
Genome browser
AA seq
378 aa
AA seq
DB search
MLKRCGRRLLLALAGALLACLLVLTADPPPSPVPAERGRRALRSLAGPSGAAPAPGLEAA
AAPGVLVREVHSLSEYFSLLTRSRRDAGPPPGSVPRPADGHPRPPAEPLTPHDVFIAVKT
TKKFHRARLDLLLETWISRHKEMTYIFTDGEDEALARRTGNVVNTNCSAAHSRQALSCKM
AVEYDRFVESGRKWFCHVDDDNYVNVRALLKLLASYPHTQDIYLGKPSLDRPIQATERVS
ESKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAERIRLPDDCTIGYIVEALL
GVPLIRSGLFHSHLENLQQVPASELHEQVTLSYGMFENKRNAVHIKGPFSVEADPSRFRS
IHCHLYPDTPWCPHTAIF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgctgcggccgtcgcctgctgctggcgctggcgggcgcgctgctcgcctgc
ctgttggtgctcacggccgaccctccgccgtccccggtgcccgctgagcgcggtcggcgc
gcgctgcgcagcctggcgggcccctcgggggcggccccagctcctgggctggaggcggcg
gcggcacccggggtgctagtccgcgaggtgcacagtctgtccgagtacttcagcctgctg
acccgctctcgtagagacgcgggcccaccgcccggcagcgtcccccgccccgcagacggc
catccgcggcccccggccgagccactcacgccgcacgacgtcttcatcgcggtcaagacc
accaaaaagtttcaccgcgcgcgcctcgacttgctgctggagacgtggatctcgcgccac
aaggagatgacgtacattttcacggacggggaagatgaagccctggcaaggcgcacgggc
aacgtggtcaatactaactgctcggctgcccacagccgccaggcgctgtcctgcaagatg
gccgtggagtatgaccgcttcgtcgaatcggggaggaagtggttctgccacgtggatgac
gataactacgtgaacgtgcgggccttgctgaagctgctggccagctacccgcacacgcag
gacatctacctcggcaagcccagcctggacaggcccatccaggccacagagagggtcagc
gagagcaaggtgcggcccgtccacttctggtttgccaccggtggggctggcttctgcatc
agccgggggctggccctgaagatgagcccttgggccagcggaggccacttcatgagcacg
gccgagcggatccggctgccggacgactgcaccatcggctacatcgtggaggctctgctg
ggcgtgcccctcatccgcagcgggctcttccactcccacctggagaatctgcagcaggtc
cccgcctccgagctccatgagcaggtgaccttgagctacggcatgtttgaaaacaagcgg
aatgctgtccacattaaggggcccttctcagtggaggccgacccatccaggttccgctcc
atccactgccacctgtatccggacacaccctggtgtccccacactgccatcttctag
DBGET
integrated database retrieval system
