KEGG   Globicephala melas (long-finned pilot whale): 115852756
Entry
115852756         CDS       T11080                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03420  Nucleotide excision repair
gmf04066  HIF-1 signaling pathway
gmf04110  Cell cycle
gmf04114  Oocyte meiosis
gmf04120  Ubiquitin mediated proteolysis
gmf04141  Protein processing in endoplasmic reticulum
gmf04310  Wnt signaling pathway
gmf04350  TGF-beta signaling pathway
gmf04710  Circadian rhythm
gmf05170  Human immunodeficiency virus 1 infection
gmf05200  Pathways in cancer
gmf05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115852756 (RBX1)
   04120 Ubiquitin mediated proteolysis
    115852756 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115852756 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    115852756 (RBX1)
   04350 TGF-beta signaling pathway
    115852756 (RBX1)
   04066 HIF-1 signaling pathway
    115852756 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    115852756 (RBX1)
   04114 Oocyte meiosis
    115852756 (RBX1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    115852756 (RBX1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    115852756 (RBX1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    115852756 (RBX1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    115852756 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmf04121]
    115852756 (RBX1)
   03400 DNA repair and recombination proteins [BR:gmf03400]
    115852756 (RBX1)
Enzymes [BR:gmf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     115852756 (RBX1)
Ubiquitin system [BR:gmf04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   115852756 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     115852756 (RBX1)
   Cul2 complex
     115852756 (RBX1)
   Cul3 complex
     115852756 (RBX1)
   Cul4 complex
     115852756 (RBX1)
   Cul7 complex
     115852756 (RBX1)
   Cul8 complex
     115852756 (RBX1)
   Cul9 complex
     115852756 (RBX1)
DNA repair and recombination proteins [BR:gmf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      115852756 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115852756 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 115852756
NCBI-ProteinID: XP_030711708
LinkDB
Position
10:complement(7730330..7744512)
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggataccccgagcggcacgaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcggtagccctctgggcctgggatattgtggttgat
aactgtgccatctgccggaaccacattatggatctttgcatagagtgtcaagccaaccag
gcgtctgctacctctgaagagtgcaccgttgcgtggggagtctgtaaccatgcttttcac
ttccactgcatctcccgctggctcaaaacacggcaggtgtgtccgttggacaacagagag
tgggagttccaaaagtatgggcactag

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