KEGG   Globicephala melas (long-finned pilot whale): 115852786
Entry
115852786         CDS       T11080                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3B-like isoform X1
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03250  Viral life cycle - HIV-1
gmf05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115852786
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    115852786
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmf03019]
    115852786
Messenger RNA biogenesis [BR:gmf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115852786
SSDB
Motif
Pfam: APOBEC2 NAD2 NAD1 APOBEC_N SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-GeneID: 115852786
NCBI-ProteinID: XP_030711786
LinkDB
Position
10:complement(9303951..9316174)
AA seq 449 aa
MEPQHPRQRAGMGLASKGGCSQRPRIRHPVERLDRQTFSFHFRNLRFASERNCTYLCYQV
ERLKHCSPDFSDWGVFQNWVYACHVELCFLSWFRAKKLSSHEQYHITWFLSWSPCLSCAE
QVVAFLKENRNVRLSIFAARLYYFWDPDYQHGLRILHDQRAWVRIMSFRDFKYCWKNFVY
NQGMPFKPWKKLRKNYQFLVAKLHEILGISATKRHRLGDLTTGVYFLTDMEARSPRSRSR
NTMNLLKPNIFRRQFGNQPRVPQPCRRRKTYLCYQLKQLDGFTLDKGCFQNKKQRHAEIR
FIDKITSLNLDPNQRYKIICYVTWSPCAACAGELVDFINGQDNLSLQIFASRLYFHWVKV
FQRGLQQLQAAQVSVAVMTRSEFEDCWEEFVDNQGMPFESWDKLEQYSESISRRLQRILS
PSNWNNLEDSFRDLRLGSPSPSSLRSDSR
NT seq 1350 nt   +upstreamnt  +downstreamnt
atggagccccagcacccgagacaaagggcagggatgggactagccagcaaaggaggctgc
agccagaggccccggatcagacacccagtggagcggttagatcgccaaaccttctccttc
cactttcgcaacctgagatttgccagtgagcggaactgcacctacctctgctaccaggtg
gaaagactgaagcactgctcacctgacttctccgactggggggtctttcaaaactgggtc
tatgcctgccatgtggaactctgcttcctctcttggtttcgcgctaagaagctgtcctct
cacgagcagtaccacatcacctggttcttatcctggagcccctgcttgtcatgtgcagag
caggtggttgcgttcctgaaggagaacaggaacgtgaggctgagcatcttcgccgcccgc
ctctactacttctgggatccagattaccagcacgggctgcgcatactgcacgaccagagg
gcctgggtgcgcatcatgtctttccgagactttaaatactgttggaaaaactttgtgtac
aatcagggaatgcccttcaagccttggaagaaactgcgtaaaaattatcagttcctggtg
gcaaagcttcatgaaattctcgggatatccgcaacgaaacgccacagactgggtgactta
acaacaggtgtttactttctcacggatatggaggctagaagtccaagatcaaggagtcga
aacacaatgaatctgctaaaaccaaatatattcagacgacagtttggcaaccagccccgg
gtcccacagccctgccgccggaggaagacctatctgtgctaccagctgaagcagctcgat
ggcttcacgcttgacaaaggctgcttccaaaacaagaaacagcgacatgcagaaattcgc
tttattgacaagatcacctcactgaatctcgacccaaaccagcgctacaaaatcatctgc
tatgtcacgtggagcccctgcgctgcctgtgccggggaactggttgatttcatcaacggt
caggacaacctgagcctgcagatctttgcctcccgcctgtacttccactgggtcaaggtg
tttcagagggggctgcagcagctacaggcagcccaggtctcagtggctgtcatgacccgc
tcagagtttgaagactgctgggaagaatttgtggataaccaggggatgcccttcgagtcc
tgggataagctggagcaatacagtgagagcataagccgtcggctccagaggatcctgtcg
ccctcgaattggaataatttagaggattccttcagagacttgagacttggatccccatcc
ccttcgtcgttaagaagtgactcaagatga

DBGET integrated database retrieval system