Globicephala melas (long-finned pilot whale): 115858863
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Entry
115858863 CDS
T11080
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115858863 (RNF123)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115858863 (RNF123)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115858863 (RNF123)
Multi subunit type E3
KPC complex
115858863 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_RNF123
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
115858863
NCBI-ProteinID:
XP_030722995
LinkDB
All DBs
Position
11:complement(38517589..38545000)
Genome browser
AA seq
1317 aa
AA seq
DB search
MASKGAGMAFSRKSHRLTSDAEKSRVTGIVHEKLLDDYLHRIFSSTDRAPTAATSRKLLN
FQNLPEHLDQLLHVDEEAEEEEESQGKVEGRLGPSTVVLDHTGGFEGLLLVDDDLLGVIG
HSNFGTIRSTTCVYKGKWVYEVLISSQGLMQIGWCTINCRFNQEEGVGDTHNSYAYDGNR
VRKWNVTTTNYGKAWAAGDIVSCLIDLDEGTLSFCLNGVSLGTAFENLSRGLGMAYFPAI
SLSFKESVAFNFGSRPLRYPVVGYRPLQDPPSADLVRAQELLGCFQAVLSVELDPVQGRL
VEKESSEWQLQGQPTVLLTLAHIFHRFAPLLRKVYLVEAVLMSFLLGVVEAGTPAQAQSV
VHQVLDLLWLFMEDYEMQDCLKQLMMSLLRLYRFSPIVPDLGLQIRYLRLTIAILSHEKS
RKFLLSHVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPHRSSREGKDSKEVKDETS
EERLRRRAYERGCQRLKKRIEVVEELQVQILKLLLNNQDDNGGEASRYIFLTKFRKFLQE
NASSRGNMPMLCPPEYMVCFLHRLISALRYYWDEYKASNPCATFSDEAYIPPQVFYNGKV
DYFDLQRLGGLLSHLRKTLKDDLASKANILIDPLELQAATMDDLDEDEEPAPAAAQRPMQ
ALAMGGALPLPRPSWLSSPTLGRANRFLSTAAVSLMTPRRPLSTSEKVKVRTLSAEQRTR
EDIEGSQWNEGLLVGRPPEEPEQPLTENSLLEVLDGAIMMYNLSVHQQLGKMVGVSDDVN
EYAMALRDTEDKLRRCPKRRKDILAELTKSQKVFSEKLDHLSRRLAWVHATVYSQEKMQD
IYWLLRVCLRTIEHGDRTGPLFAFMPEFYLSVAINSYSALKNYFGPVHSMEELPGYEETL
TRLAAILAKHFADTRIVGTDIRDSLMQALASYVCYPNSLRAVERIPEEQRIAMVRSLLAP
YEQRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDANLPSLQKPCPSTLLQQHMAD
LLREGPDVAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDL
SVSLLRVLEMTITLVPEIFLDWAQPTSEMLLRRLAQLLNQVLNRVTAERNLFDRVVTLRL
PGLESVDHYPILVAVTGILVRLLVHGPASGTERATSVLLADPCFQLRSICYLLGQPEPPT
PGTALPAPDQKRFSLQSYTDYISVEELAQVEQMLAHLTSASAQAAAASLPTSEEDLCPIC
YAHPISAVFQPCGHKSCKACINQHLMNNKDCFFCKATIMSVEDWDKAASASATSSAA
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagggggccggcatggctttctcccgaaagagccacaggctgacctcagat
gctgagaaatctagggtcacaggcatcgtgcacgagaagctactggacgactacctgcac
cgcatcttttcctctactgatcgtgcacccacggcagccaccagcaggaaactcctgaac
ttccagaacctgccagagcacctggaccagttgttacatgtggacgaggaggcggaggag
gaggaggagagccagggaaaggttgaagggcggcttggcccgtccactgtggtcctggac
cacacgggtggcttcgaagggcttcttctggtggatgatgacctcttgggggtgattgga
cacagcaactttggtactatccgctctaccacatgcgtgtacaaagggaaatgggtctac
gaggtgctcatctcctcccaggggctcatgcagattggctggtgcacgatcaactgccgc
ttcaatcaggaggagggggttggagatacacacaactcctatgcctacgatggcaaccgg
gtgcgcaagtggaacgtgaccacgacgaactacgggaaggcgtgggcagcgggggacatt
gtgagctgcctgatcgacctggatgaaggcacgctgtccttctgcctgaatggtgtgtct
ctgggcactgcctttgagaacttatccaggggcctgggcatggcctacttcccagccatc
agcctctccttcaaggagtctgtggccttcaacttcggcagccgtcccctgcgctaccca
gtggtgggctaccggcccctgcaggacccaccaagcgccgacctggttcgggcacaggag
ttgctgggctgcttccaggcagtgctgagcgtggagctggaccccgtgcaagggcggctg
gtggagaaggaaagctctgagtggcagttgcagggccagcccaccgtcctcctcacactg
gctcacatcttccatcgcttcgcaccgctcctgcgcaaggtgtacctggtggaggccgtg
ctcatgagcttcctgctgggcgtcgtggaggcgggcacccccgcacaggcgcagtctgtg
gtgcaccaggtcctggatctcctgtggctcttcatggaggactatgagatgcaagattgc
ctcaagcagttgatgatgtccctgttgcggctgtaccggttctcgcccatcgtccctgac
ctgggcctgcagatccgctacctgcggctcaccattgccatcctcagtcatgagaagtcc
cgcaagtttctgcttagccacgtcctcttcgacgtgctccggtccgttgtcttcttttac
atcaagagccccctgcgtgtggaggaggctggcctacaggagctcatccccaccacctgg
tggccccaccgctccagcagggagggcaaagacagtaaggaggtgaaggacgaaacctcc
gaggagcggctccggcggcgtgcctatgaacggggctgccaaaggctcaagaagcgcatc
gaagtggtggaagaactacaggtccagatcctgaagctgctgttgaacaatcaagatgac
aacgggggcgaagcttctaggtacatcttcctgaccaagttccgaaagtttctgcaggag
aatgccagcagccgggggaacatgcccatgctctgcccccccgagtacatggtctgcttc
ttacaccgcttgatctcggccctgcgttactactgggacgaatacaaggcttcgaatcca
tgcgctaccttcagtgacgaggcctacatcccgccccaggtcttctataatggcaaggtg
gactacttcgacctgcagcgccttggaggcctcctctcgcaccttcggaagaccctcaaa
gatgaccttgcctctaaggccaatatcctgatcgacccactggagctccaggcggccacc
atggatgacctggatgaggatgaggagccagccccggctgcggcccagcgccccatgcag
gccctggccatggggggtgcgctgcccctgcctcggcccagctggctcagttctccaacc
ctgggccgagccaaccgcttcctcagcacagcagctgtgagcctgatgaccccacggcgg
cctctgagcacctcagagaaagtgaaggtccgcacactgagcgcggagcagaggacccgt
gaggacatcgagggtagccagtggaatgagggcctgctggtggggcggccccccgaggag
cctgagcagcccctcaccgagaactccctgctggaagtcctggacggtgccatcatgatg
tataatctcagcgttcaccagcagctgggcaagatggtgggagtgtccgatgatgtcaat
gagtatgcgatggctctgagggacacagaggacaagctccgccggtgccccaagcggagg
aaggacatccttgcagagttgacgaagagccagaaggttttctcagaaaagctggatcac
ctaagtcgccgtcttgcctgggtccatgccaccgtttactcccaggagaagatgcaggac
atctactggctgctgcgtgtctgcctgcggaccatcgagcatggagaccgcacaggtcct
ctctttgccttcatgcccgaattctacctgagtgtggccatcaacagctacagtgctctc
aagaattactttggccctgtgcacagcatggaggagctcccaggctatgaagagaccctg
acccgtctggctgccatccttgccaaacactttgccgacacacgcatcgtgggcactgat
atccgtgactcgctgatgcaggccctggccagctacgtgtgctacccaaactctctgcgg
gccgtggagcggatccctgaggagcagcgtatcgccatggtgaggagtctcctggctccc
tatgagcagcggccctgggcccagaccaactggatcctggtgcggctctggaggggctgt
gggttcgggtaccgctatacacggctgccacacctgctgaaaaccaaacctgaggatgcc
aatttgcccagcctccagaagccctgcccctccaccctgctgcagcagcacatggcagac
ctgttgcgggagggtcctgacgtggcacccagcttcctcaacagcgtcctcaaccagctc
aactgggccttctctgagtttatcggcatgatccaggagatccagcaggctgctgaacgc
ctggagcggaactttgtggacagccggcagctcaaggtatgtgccacctgctttgacctc
tcggtcagcctgctgcgtgtcttggagatgaccatcacgctggtgcctgagatattcctc
gactgggcccagcctacctctgagatgctgctgcggcgtctcgcacagctgctgaaccag
gtgctgaaccgggtgacagctgagaggaacctgtttgaccgcgtggtcaccctgcggctg
cctggcctggagagtgtggaccactaccctattctggtggcagtgacaggcatcctggta
cgactcctggtgcacggcccagcctcagggacagagagagccacatcagtgctcctggct
gatccctgcttccagctccgctccatatgctatctcttggggcagccagagccccctacc
cctggcactgccctgcctgcccctgaccagaagcgcttctccctacagagctacacagat
tacatcagtgttgaggaactggcccaggtggaacagatgttggcacacctgacctctgca
tctgcccaggcagcagctgcctccctgcccaccagtgaggaagacctctgccccatctgc
tatgctcaccccatttctgctgtgttccagccctgtggccacaagtcctgcaaagcctgc
atcaaccagcacctgatgaacaacaaggattgcttcttctgcaaagccaccatcatgtct
gtagaggactgggacaaggcagccagtgcaagtgccacttcctcggctgcctag
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integrated database retrieval system
