Globicephala melas (long-finned pilot whale): 115859310
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Entry
115859310 CDS
T11080
Symbol
TNFRSF11A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04060
Cytokine-cytokine receptor interaction
gmf04064
NF-kappa B signaling pathway
gmf04380
Osteoclast differentiation
gmf04917
Prolactin signaling pathway
gmf05323
Rheumatoid arthritis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
115859310 (TNFRSF11A)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115859310 (TNFRSF11A)
09150 Organismal Systems
09152 Endocrine system
04917 Prolactin signaling pathway
115859310 (TNFRSF11A)
09158 Development and regeneration
04380 Osteoclast differentiation
115859310 (TNFRSF11A)
09160 Human Diseases
09163 Immune disease
05323 Rheumatoid arthritis
115859310 (TNFRSF11A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
gmf04050
]
115859310 (TNFRSF11A)
04090 CD molecules [BR:
gmf04090
]
115859310 (TNFRSF11A)
Cytokine receptors [BR:
gmf04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
115859310 (TNFRSF11A)
CD molecules [BR:
gmf04090
]
Proteins
115859310 (TNFRSF11A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
TraI_2_C
Chordopox_A13L
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
115859310
NCBI-ProteinID:
XP_030723973
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Position
13:16896086..16952768
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AA seq
626 aa
AA seq
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MAPRARRRRPLPALLALCALFGRLQVTFQITSPCTSERHYERLGRCCNKCEPGKYLSSKC
TATSESVCLPCGPDEYLDTWNEEDKCLLHKVCDTGKALVAVEPGNRTAPRRCACTAGYHW
SEDCRCCRRNAECAPGFGARLPVQLNKDTVCEPCLAGYFSDASSSTEKCKPWTNCTILGE
TEALHGTDKSDVVCSSLPPTTPPNEPQIYLPSLIILLLFISVALVAAVIFGVYYRKKGKA
LTANLWHWVNEACGRLSGNKQESSGSNLSCTRVEAPSQREICEGVLLLTLEQKMFSEDMC
CPDSGGACAGGGPCVLGEDAGMLTLVSEIEGDPFRQIPTEDEYVDRPPRTPDSILFFTQP
GSTSTPPFPEPLEVGENDSLSQCFTGTESLVDSESCHFAEPLCRTDWIPMSSEKYLQREV
EGGNCPHWAASANSADGCAGCRSPAGEDRQPLMGCPQSGPLPQSAYGMGLPPEAADGAEA
GGQPTDGAEARLPSSTRGGPGSGGPSGEQPPASGNVTGNSNSTFISSGQVMNFKGDIIVV
YVSQNSQEGPAGPGGCAGEPVGRPVQEESPPCCDSFAGLGPRFPDTCAGLEVGPGLQERG
APGPDKASRPVQEQGEAEAGAPETRR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcgcgcccggcggcgccgcccgctgcccgcgctgcttgcgctctgcgcgctg
ttcggccggctgcaggtgacttttcagatcacctctccgtgtactagcgagaggcattac
gagcgccttggacgatgctgtaacaaatgtgaaccaggaaagtacttgtcttccaaatgc
actgctacctctgaaagcgtctgtctgccctgtggcccggatgaatacctggacacctgg
aatgaagaagataaatgcttgctgcataaagtttgtgatacaggcaaggccctggtggcc
gtggagcccggcaaccggacggctccgcggcgctgcgcctgcaccgccgggtaccactgg
agcgaggactgccgctgctgccgccgcaacgccgagtgcgcgcccggcttcggcgcccgg
ctcccggtgcagctcaacaaggacacggtgtgcgagccctgcctcgcaggctacttctcc
gacgcctcttcctccacagaaaagtgcaaaccctggaccaactgtaccattcttggagag
acagaagcacttcacgggaccgataaatcagatgtggtttgtagttctcttccacctaca
acaccaccaaatgaaccacagatttacttgcccagtttaattattctgcttctcttcata
tctgtggcattagttgctgctgtcatctttggtgtttactataggaaaaaagggaaagca
ctaacagctaatttgtggcactgggtcaatgaagcttgcggccgcctaagtggaaataag
caggagtcctcaggcagcaatcttagctgcactcgtgtggaagcccctagtcagcgtgaa
atctgtgagggtgtcttactgctgactctggaacagaagatgttttctgaagatatgtgc
tgtcctgacagtggaggtgcgtgtgcaggtggcggtccctgtgtgctgggagaagatgcc
gggatgctcaccctggtcagcgagattgagggggaccccttcaggcagattcccacggaa
gacgaatacgtggacaggcccccccggaccccagactctatattattcttcactcagcct
ggaagcacatccacaccgcctttccctgaacccctggaggtgggagagaatgacagtcta
agccagtgcttcactgggacagagagcttggtggattccgaaagctgccacttcgccgag
cctctgtgcaggactgactggattcctatgtcctccgaaaagtacttgcaaagagaagtg
gagggtggcaattgcccccactgggcagccagcgccaactctgcagatggctgtgcaggc
tgcaggagccctgctggggaggaccggcaacccctgatgggttgcccccaaagtggaccc
ttgccccagagcgcctatggcatgggccttcctcccgaagcagctgatggggcagaggcg
ggaggccagcccacggatggggctgaagcacggcttcccagctccacgagaggaggtcct
ggctctggaggcccttccggtgagcagccacctgcatcaggaaatgtgactggaaacagt
aactccacgtttatttccagcgggcaggtgatgaatttcaagggcgacatcatcgtggtc
tacgtcagtcagaactcgcaagagggtccggcagggccgggcggctgcgcgggggagccg
gtgggccgcccggtgcaggaggagagcccgccgtgctgcgactcgttcgccggcctcggg
ccgcgcttcccggacacgtgcgccggcctcgaggtgggcccggggctgcaggagcgaggc
gcccccgggcccgacaaggcctcgcggccggtgcaggagcagggggaggccgaggccggc
gcgcccgagacgcggcgctga
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