KEGG   Globicephala melas (long-finned pilot whale): 115860138
Entry
115860138         CDS       T11080                                 
Symbol
AFF4
Name
(RefSeq) AF4/FMR2 family member 4
  KO
K15185  AF4/FMR2 family member 4
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115860138 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gmf03021]
    115860138 (AFF4)
Transcription machinery [BR:gmf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     115860138 (AFF4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 115860138
NCBI-ProteinID: XP_030725504
LinkDB
Position
3:complement(109893175..109981781)
AA seq 1164 aa
MNREDRNVLRMKERERRNQEIQQGDDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYD
EMKDFIGDRSIPKLVAIPKPTVPPTADEKSNPNFFEQRHGSSHQSSKWTPVGPAPSTSQS
QKRSSGLQSGHSSQRASAGASSGANSSGQRHDRDSYSSGGSSSRKKGQHGSEHSKSRSSS
PGKPQAVSSLSSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSNQSFPP
SLMSKSSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQSHGNSMTELKPSSKAHLTKLKI
PSQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSNFGPG
EQKRYNPSSKTSNGHQSKSMLKDDLKLSSSEDSDGEQDCDKTMPRSTPGSNSEPSHHNSE
GADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLN
KVNPHKVSPASSVDSNIPSSQGYKKEGREQGTGNSYTDPGGPKETSSATPGRDSKTVQKG
SESGRGRQKSPAQSDSTAQRRTVGKKQPKKTEKAAAEEPRGGLKIESETPVDMATSMPSS
RHKAATKGSRKPNIKKESKSSPRPSAEKKKYKSTSKSSQKSREIIETDTSSSDSDESESL
PPSSQTPKYPESNRTPVKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRYPLIVKID
LNLLTRIPGKPYKETETPKGEKKNVPEKHTREAQKQASEKVSNKGKRKHKNEDDNRANES
KKPKTEDKNSAGHKPSSNKESSKQSAAKEKDLLPSPVGPVPSKDPKTEHGSRKRTISQSS
SLKSSNNSNKENSSSSKNSSSTSKQKRTEGKTSSSSKEVKEKAPNSSSNCPPSTPTPDAS
KPRRTKLAFDDRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIECGNALEKN
AQESKSPFLMYSETVELIKYTMKLKNYLAPDATAADKRLTVLCLRCQSLLYLRLFKLKKE
TALKYSKTLTEHLKNSYNNSQAPSPGLGSKAAGMPSPVSPKLSPGNSGNYSSGASSASAS
GSSVTIPQRIHHMAASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKVMGPLIFNAS
IMTDLVRYTRQGLHWLRQDAKLIS
NT seq 3495 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaccggaatgtgctgcgtatgaaagaacgggaaaggcggaatcaagaa
attcagcagggggacgacgccttcccacctagctctcctctctttgctgagccatacaaa
gttactagcaaagaagataagctgtcaagtcgtattcagagtatgcttggaaactacgat
gaaatgaaggatttcataggagacagatctataccaaagcttgttgcaattcccaagcct
acagtaccgccgacagcagatgaaaaatctaacccaaatttctttgaacagagacatggg
agctctcatcagagtagcaaatggactccagtaggacctgcacccagcacttctcagtct
cagaaacggtcctcaggtttacagagtggacacagtagccagcgggccagtgcaggtgcc
agcagtggcgctaatagcagtggccagaggcatgaccgtgactcatacagcagtggtggg
agcagtagccggaaaaaaggccagcatggatcagaacactccaaatcacgctcttccagc
cctggaaaaccccaggctgtttcttcattaagctccagtcattccaggtctcatgggaat
gatcaccatagcaaggaacatcaacgttccaaatcacctcgggaccctgatgcaaactgg
gattctccttcccgagtacctttttcaagtgggcagcactcaaatcagtctttcccgcct
tcattgatgtcaaagtccagttcaatgttacagaaacccactgcctatgtgcggcctatg
gatggacaggaatccatggaaccaaaactgtcctctgaacactacagcagccaatctcat
ggcaacagtatgactgaactaaagcccagcagcaaagctcatctcaccaagctgaaaata
ccttcccaaccattggatgcatctgcttctggtgatgtgagctgtgtggatgaaattctt
aaagagatgacgcattcatggcctccccctctaacggctattcatacaccatgcaaaacc
gaaccttccaaatttccttttccaactaaggagtctcagcagtccaattttggccctgga
gaacaaaaaagatataatccttcttctaaaacttccaatgggcaccagtctaaatctatg
ttaaaagatgacttaaaactaagcagcagtgaagacagtgatggggaacaggattgtgat
aagacaatgccaaggagtacacctggaagtaactctgaaccttcacaccataatagtgaa
ggggcagataactccagggatgattctagcagccacagtggatctgaaagcagctctgga
tctgactcagagagtgaaagtagttccagtgacagtgaggcaaatgagccatcccagagt
gcatctcctgagcctgaaccaccacccacaaacaaatggcaacttgataattggctgaat
aaagtgaacccacataaagtgtcaccagcttcttctgtggacagtaatatcccatcatct
caaggctataaaaaggaaggccgagaacagggcacagggaatagctatactgatccaggt
ggtcctaaagaaacaagttctgctactcctggacgagactccaaaactgtccaaaaggga
tcagagagtgggcgtgggaggcagaagtctcctgcacagagtgacagcacagcacagagg
agaactgtaggcaaaaaacaacccaaaaagactgagaaggcagctgctgaagagccccgc
ggaggcctgaagatagagagtgaaactcctgtagacatggctaccagcatgccctccagc
agacacaaagcagctaccaaaggctcaaggaaacccaatataaaaaaggagtccaaatct
tcccctcgaccttcagcagagaaaaagaaatacaagtcaacaagtaaatcttcccagaaa
tcaagggaaatcatagaaacagatacctcatcctcagattcggatgaaagcgagagcctt
cctccttcctcacaaactcctaagtaccctgagagtaataggactcccgttaagccctcc
tcagtggaggaagaagatagcttttttcggcaacgaatgttctctcctatggaagagaag
gaacttctttcacccctcagtgagcctgatgacaggtatccacttattgtgaagattgac
ctgaatctcttgactagaataccaggaaagccttacaaagaaacagagacacccaagggg
gaaaagaaaaatgttccagaaaagcacacaagagaggctcagaaacaagcctcagaaaaa
gtttccaacaaaggcaaaaggaaacataagaatgaagatgataacagagccaatgagagc
aagaaacccaaaacggaagacaagaattcggcaggccacaagccatccagcaacaaagag
tcatctaaacagagtgctgctaaagaaaaagatttgttgccttctcctgttgggcctgtt
ccttcaaaagatccaaaaacagagcatggttctcggaagaggactattagtcagtcttct
tccttaaagtcaagtaataacagcaacaaggaaaatagcagcagcagcaaaaacagttcc
tccacatcaaagcagaagaggactgaagggaagacttccagtagctctaaggaggtcaag
gaaaaggctccaaatagctcttctaactgtcctccatctacaccaactcctgatgcttct
aagcctcggagaacgaagcttgcctttgatgacagaaattattcagcagaccattattta
caagaagcaaaaaagctaaagcacaatgcagatgcattgtctgataggtttgagaaagct
gtatactatcttgatgctgtggtatctttcattgaatgtgggaatgcattagagaaaaat
gctcaggaatccaaatccccattccttatgtattcagagacagtggagctcatcaaatac
accatgaagctaaagaattacttggcaccagatgctacagctgcagataaaagactcaca
gtactttgcctgcgatgccagtctttgctgtacctgaggctattcaaactgaagaaagaa
actgctctgaagtattcaaagacactaacagagcacctgaagaattcttataataattct
caagcaccatcaccaggtttgggaagcaaagctgctgggatgccttcccctgtttctcca
aagctgtcaccaggcaattcgggaaattattcttctggggccagtagtgcttcagcaagt
ggttcttcagtgaccattccacagaggatccaccacatggcagccagctatgttcaggtt
acatccaacttcctctatgccaccgaaatttgggaccaagctgaacagctttccaaagag
cagaaagaattctttgctgaactggataaagtaatgggtcctctcatctttaacgcaagc
atcatgacagacctagttcgttatacccggcagggactgcactggcttcgccaggatgcc
aagttgatatcctga

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