Globicephala melas (long-finned pilot whale): 115860202
Help
Entry
115860202 CDS
T11080
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf00310
Lysine degradation
gmf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115860202 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115860202 (PRDM6)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115860202 (PRDM6)
Enzymes [BR:
gmf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
115860202 (PRDM6)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115860202 (PRDM6)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115860202 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
115860202
NCBI-ProteinID:
XP_030725646
LinkDB
All DBs
Position
3:101097351..101196676
Genome browser
AA seq
604 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPHSGGGPLKGGGAAGPLGAPQPLQPPPPPERTE
PQPDSLRPRPASLSSASSTPASSSTSASSASSCAAAAAAAAAAALAGLSALPVAQLPVFA
PLAAAAVAAEPLPSKDLCLGAVSGPGPSKCGGGGGGCGGGGGGGGVGDVRGAPRFRCSAE
ELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADNRNGECPMHGPLHSLRRLVGTSSAAAA
APPPELPEWLRDLPREVCLCTSTVPGLAYGICAAQRIQQGTWIGPFQGVLLPPEKVQAGA
VRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRYIRCARHCGEQNLTVVQYRSNIFYRAC
IDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPSTVMEAMCRQDPLQPFNKSSKLS
PAAQQRSVVFPQTPCGRNFSLLDKSGPMESGFNQINVKNQRVLASPTSTSQLHSEFSDWH
LWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKC
GYCGRAFAGATTLNNHIRTHTGEKPFKCERCERSFTQATQLSRHQRMPNECKPITESPES
IEVD
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagaccccggcggctcggcattcctcaaagtggacccagcttatctg
cagcactggcagcaactcttcccgcacagcggcggcggcccgctcaagggcggcggtgcc
gcgggtcccctgggcgcaccgcagcctctccagccgccgccccccccggagcgcactgag
ccccagccggacagcctgcgcccgcggcccgcctcgctctcctccgcctcctccactccg
gcttcctcctccacctcggcctcctctgcctcctcctgcgccgcggcggcggccgccgcc
gccgccgccgcgctggccggtctctcggccctgcccgtggcgcagctgccagtgttcgcg
cctctggctgccgccgccgtcgccgcggagccgctgccctccaaggacctgtgcctcggc
gccgtctcgggcccggggccctccaagtgcggaggcggaggcggcggctgtggcggcggc
ggcggcggcggcggcgtcggggatgtccggggcgccccgcgcttccgctgcagcgcagag
gagctggactattacctgtacggccagcagcgcatggagatcatcccgctcaaccagcac
accagcgaccccaacaaccgttgcgacatgtgcgcagacaaccgcaacggcgagtgcccc
atgcacgggccgctgcactcgctgcgccggctcgtgggtaccagcagcgctgcggccgcc
gcgccccctccggagctgcccgagtggcttcgggacttgccacgggaggtgtgtctgtgc
accagcaccgtgcccggcctggcctacggcatctgcgcggcgcagaggatccagcagggc
acctggattgggcccttccagggcgtgctcctgccgccggagaaggtgcaggccggcgcc
gtgaggaacacgcagcatctctgggagatatatgaccaagatgggacactacagcacttt
attgatggtggggaacctagtaagtcgagctggatgaggtatatccgatgtgcaaggcac
tgcggagaacagaatctaacagtagttcagtacaggtcgaatatattctaccgagcctgt
atagatattcccaggggtaccgagcttctggtgtggtacaatgacagctatacgtctttc
tttgggatccctttacaatgcattgcccaggatgaaaacttaaatgtcccctcgacggtc
atggaagccatgtgcagacaggaccccctgcagcccttcaacaagagcagcaaactctcc
cccgccgcccagcagcgctccgtcgtcttcccacagactccgtgcggcaggaacttctcc
ctcctggataagtctgggcccatggaatcaggatttaatcaaatcaacgtgaaaaaccag
cgagtccttgcaagcccgacctccaccagccagctccactcggagttcagtgactggcat
ctttggaagtgcgggcagtgctttaagactttcacacagaggatcctgttacagatgcac
gtgtgcacgcagaaccccgacagaccataccagtgcggccactgctcccagtccttttcc
cagccttcagaactgaggaaccacgtggtcactcactccagtgaccggcctttcaaatgt
ggctactgtggtcgtgcctttgctggggccaccacgctcaacaaccacatccgaacccac
actggagaaaagcccttcaagtgcgagaggtgtgagaggagcttcacgcaggccacccag
ctgagccgacaccagcggatgcccaatgagtgcaagccaataaccgagagcccagaatca
atcgaagtggattaa
DBGET
integrated database retrieval system
