Globicephala melas (long-finned pilot whale): 115862322
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Entry
115862322 CDS
T11080
Symbol
NECTIN2
Name
(RefSeq) nectin-2 isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03266
Virion - Herpesvirus
gmf04514
Cell adhesion molecule (CAM) interaction
gmf04517
IgSF CAM signaling
gmf04520
Adherens junction
gmf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
115862322 (NECTIN2)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115862322 (NECTIN2)
04517 IgSF CAM signaling
115862322 (NECTIN2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
115862322 (NECTIN2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115862322 (NECTIN2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmf04515
]
115862322 (NECTIN2)
04090 CD molecules [BR:
gmf04090
]
115862322 (NECTIN2)
Cell adhesion molecules [BR:
gmf04515
]
Immunoglobulin superfamily
Nectin family
115862322 (NECTIN2)
CD molecules [BR:
gmf04090
]
Proteins
115862322 (NECTIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
ig
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
115862322
NCBI-ProteinID:
XP_030729832
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All DBs
Position
19:complement(10057663..10086112)
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AA seq
539 aa
AA seq
DB search
MARDAALPPSKLSPLKLPLLPLLLLLLRETGAQDVRVRAAAEVRGQLGDTVELPCHLLLP
APEIRVSQVTWLRLDAPEGNQNVAIFHPQYGPSFPSPKPGKERLSFVNAGQSTGAGQGTE
LEVRDATLALRGLTVEDEGNYTCEFATFPRGTSRGVTWLRVIAQPQNHAETQEVTLSLDP
VPVARCVSTGGRPPARVSWLSPLDGEARESQVSGPLPGTVTVTSRFTLVPLGQADGVKIT
CKVEHESFEEPVLLPVTLSVRYPPEVSISGYDDNWYVGRSEASLNCDVRSKPEPTGYDWS
TTSGVFPASAVAQGPKLIVHSVDRLFNTTFICTVTNAVGTGHAEQVVLVRETPNTAGAGA
TGGIIGGIIAAIIATAVAATGILICRQQRKEQRLQGAEEVEDLEGPPSYKPPTPEAKLEE
PDMPSQLFTLGASEHNPLKTPYFDASVSCAEQEMPRYHELPTLEEQSGPLLLGATNLGSP
MLVPPGMPALETVSLDLEDEEEEEDYLDKINPIYDSLSYSSPSESYQGKGFVMSRAMYV
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggacgcagccctcccgccgtcgaaattgtcgccgctgaagctgcctctactg
ccattgctgctgctactgctccgggaaaccggagcccaggatgtgcgagttcgggctgca
gccgaggtgcggggccagctgggggacaccgtagagttgccgtgccacctgctgctccca
gcgcctgaaatccgagtgtcacaggtgacgtggctgcgcctggacgcgcctgagggtaac
cagaacgtggctatcttccacccccagtatggtcccagcttccccagcccgaagcctggc
aaggagcggctgtccttcgtcaatgccgggcagagcaccggggccgggcaaggcacagag
ctggaggtgcgggacgccacactggccctccgggggctgacggtggaggacgagggcaac
tacacctgcgagtttgccaccttcccccggggcaccagtcggggagtgacctggctcaga
gtcatagcccagccccagaaccatgccgaaacacaagaggtcacactcagtctggatcct
gtacccgtggcccgctgtgtctccacgggcggccggccacctgcccgagtctcctggctc
tcacccttggatggggaggccagagagagccaggtgtcaggacccctgcctggtacagtc
accgtcaccagccgcttcaccttggtacccttgggccaagcagatggcgtcaagatcacc
tgcaaagtggagcacgagagctttgaggagccagttctgctgcctgtgaccctctctgtg
cgctacccccctgaggtctccatatctggctatgatgacaactggtatgtcggccgtagt
gaggcctccctgaactgtgacgtccgcagcaagccagagcccacaggctacgactggagc
acgacttcaggcgtcttcccagcctcagcagtagcccagggccccaagctgatcgtccac
tcggtggaccggctcttcaacaccaccttcatctgcaccgtcaccaacgccgtgggcacg
ggccacgccgagcaggtggtcctagttcgagagacacccaacacagcaggcgcaggggcc
acaggtggcatcatcgggggcatcattgctgccatcatcgcgactgctgtggccgccaca
ggcatcctcatctgccgacagcagcggaaggagcagaggctgcagggggcagaggaggtg
gaggacctagaggggcctccctcatacaagccgccgactccagaggcaaagctggaggag
ccggacatgccctcccagctcttcaccctgggggcctcggagcacaacccgctcaagacc
ccctactttgatgctagtgtctcgtgcgctgagcaggaaatgcctcgataccatgagctt
cccaccttggaagaacagtcagggcccctgctcctgggggccacgaacctggggtccccc
atgctggtgcctccagggatgcctgctctggagacggtttccctggatctagaggacgag
gaggaggaggaagactatctggacaagatcaaccccatctacgattccctgtcctactcc
agcccctctgagtcctaccagggcaaaggctttgtcatgtcccgggccatgtatgtgtaa
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