Globicephala melas (long-finned pilot whale): 115862373
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Entry
115862373 CDS
T11080
Symbol
ARHGEF1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X2
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04270
Vascular smooth muscle contraction
gmf04611
Platelet activation
gmf04810
Regulation of actin cytoskeleton
gmf04928
Parathyroid hormone synthesis, secretion and action
gmf05135
Yersinia infection
gmf05163
Human cytomegalovirus infection
gmf05200
Pathways in cancer
gmf05205
Proteoglycans in cancer
gmf05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115862373 (ARHGEF1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
115862373 (ARHGEF1)
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
115862373 (ARHGEF1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
115862373 (ARHGEF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
115862373 (ARHGEF1)
05205 Proteoglycans in cancer
115862373 (ARHGEF1)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
115862373 (ARHGEF1)
09171 Infectious disease: bacterial
05135 Yersinia infection
115862373 (ARHGEF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
115862373 (ARHGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115862373 (ARHGEF1)
Membrane trafficking [BR:
gmf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115862373 (ARHGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
HA
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
115862373
NCBI-ProteinID:
XP_030729949
LinkDB
All DBs
Position
19:11354476..11373589
Genome browser
AA seq
969 aa
AA seq
DB search
MEAEDVARGAAPGPPRPGLVPISIIGAEDEDFENELKTNPEEQNNQYQSLDQVKRRPAHL
MALLQHVAMQFEPGPLLCCLHADMLGSLGPKEAKKAFGDFCHSFLDKCAILRVTVPPTVA
FELDRTRPDLLSEDVQRHFVQEVVQTQQAAVSRQLEDFRSKKLMGMTPWEQELIQLGAWV
GRDRATYEARERHLAERQLAHLEDMQHTISNDEEKSAAVVSAITLYMRHLGVRTKSGDKK
SGRNFFRKKVMGNRRSEEPTKTKKGLSSFLDAARWNRGEPQAPDFRHLKVEADGEKPGLT
ERKGGLGVPSRDRNVGAPGQDTPGVSLHPLSGDSPDREPGVDALPELGDPPPQGPASLEP
AAPLESTEEGADTERLSGRLGRSESLRVSDRRRPSRGSLGAKGRGGGRSRSDVDMDPSSA
TAVLGPARRATPEPGDEGEPGRSGLELEPEEPPGWRELVPPGTLHSLPKSQVKRQEVISE
LLVTEAAHVRMLRVLYDLFYQPMADGGFFSLEELQNIFPSLDELIEVHSLFLDRLMKRRQ
DSGYLIEEIGDVLLAQFDGTEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCAFVQEA
ESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEEPAEREKVELAAECCREILHHVN
QAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKDKA
VEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHK
AFYVIFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKVPARTSRPKHRPSPSSTREP
LLSSSENGNGGREMPPADGRMERIFSALLPFCRPGPEGQLAAKALQKVLSLKQLLLPSEE
DSGVGPPLEGDGVPGGGPPSPPQPQEIREELLSLEETIKQLEEVEEEFCRLRLLLSPLGE
NTVPQSGCT
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaagacgtcgcccgaggggcggccccagggcccccccggcctggcctggtg
cccatcagcatcatcggggctgaggacgaggattttgagaatgagctgaagacgaacccc
gaggagcaaaacaaccagtaccagagcctggatcaggtgaagcggcgcccggcccacctc
atggccctcctgcagcacgtggccatgcagttcgagccaggacccctgctctgctgcctg
cacgcggacatgctgggctcactgggccccaaggaggccaagaaggccttcggcgacttc
tgccacagcttcctggataagtgtgcgattctgcgggtgacggtccctcccaccgtggcc
tttgaacttgaccgcacgcggcccgatctcctctccgaggatgtccagcggcatttcgtg
caggaggtggtgcagacccagcaggcagctgtcagccggcagctggaggacttccgctcc
aagaagctcatgggcatgacaccctgggagcaggagctgatccagctgggggcctgggtt
gggcgggaccgcgccacctatgaggcccgggagcggcacctggctgagcggcagctggcc
cacctggaggacatgcaacacaccatctctaacgatgaggaaaagagtgctgctgtggtc
agtgccatcaccctgtacatgcgccacctcggggtgcggaccaagagtggagacaagaag
tcggggaggaatttcttccggaaaaaggtgatggggaaccggcggtcagaagagccgacc
aagaccaagaaaggactgagcagcttcctggatgccgcccgctggaaccggggagagccc
caggccccagattttcgacacctcaaagttgaggctgatggtgagaagccaggccttaca
gaacgtaagggaggtctgggggtgccctcccgggaccggaatgtcggagcccctgggcag
gacacccccggagtttctctgcaccctctgtctggggacagccctgaccgggaaccaggt
gttgacgccctcccggagctgggggacccgcccccgcagggcccagccagcctggagcct
gcagcgcccctggagagcacagaggagggtgctgacacggagaggctgtcggggcgtctg
gggcgctcggagagcctgcgggtgagtgaccgccgccggccttcccggggcagcctcggg
gctaagggccggggtgggggccgctcccggagcgacgtggacatggaccccagctccgcc
acggccgtgcttggccctgcccgacgagccacccccgagcctggagatgagggggagccg
ggccgatcgggactagagctggaaccagaagagccccccggctggcgggaactcgtcccc
ccgggcaccctgcacagccttcccaagagccaggtgaagcggcaggaggtcatcagcgag
ctgctggtgacagaggcggcccacgtgcgcatgctccgggtgctctatgacctcttctac
cagcccatggcggatgggggcttcttctccctggaggagctacagaacatcttccccagc
ctggacgagctcatcgaggtgcattccctgttccttgatcgcctgatgaagcggaggcag
gacagtggctacctcattgaggagatcggagatgtgctgctggcccagtttgatggtacc
gagggctcctggttccagaaaatctcctcccgcttctgcagccgccagtcgtttgcctta
gagcagctcaaagccaaacagcgcaaggagcctcggttctgtgccttcgtgcaggaggcc
gagagccgcccccggtgccgccgcctgcagctgaaggacatgatccccacggagatgcag
cgtctgaccaagtacccgctgctgctgcagagcatcgggcagaacacagaagagcctgcg
gaacgggagaaagtggagctggcggctgagtgctgcagggaaattctgcaccacgtcaac
caagccgtgcgcgacatggaggacctgctgcggctcaaggattatcagaggcgcctggat
ttgtcccacctgcggcagagcagcgaccccatgctgagcgagttcaagaacctggatatc
accaagaagaagctggtccatgagggcccgctgacgtggcgggtgactaaggacaaggct
gtggaggtccacgtcctgctgctggacgacctgctgctgctgctgcagcgccaggatgag
cggctgctgctcaaatcgcacagccggacgctgacgcccacgcccgacggcaagaccatg
ctgcggcccgtgctgcggctcacctccgccatgacccgagaggtggccaccgatcacaaa
gccttctatgtcatttttacctgggaccaggaggcccagatatacgagctggtggcccag
accgtgtcggagcggaagaactggtgtgccctcatcactgagaccgctggatccctgaag
gtccctgcccgcacctcccgacccaaacaccggcccagccccagcagcacccgtgaaccc
ctgctcagcagctctgagaacggcaacggtggccgagagatgcctccggctgacggccgg
atggagagaatcttcagcgccctcctgcccttctgcagaccaggccctgagggccagctc
gccgccaaggcccttcagaaagtgctgtccctgaagcagctcctgcttccctcggaggaa
gacagcggggtggggcctccgctcgaaggcgatggagtcccagggggcggccccccaagc
ccaccacagccccaggaaattcgggaggagctgctcagcctggaggagaccattaaacag
ctggaggaggtggaggaggagttttgccgcctgagactcctcctgtctccgctcggggag
aacactgtcccccagtctggctgtacctga
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