Globicephala melas (long-finned pilot whale): 115862570
Help
Entry
115862570 CDS
T11080
Symbol
NPHS1
Name
(RefSeq) nephrin
KO
K24496
nephrin
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
115862570 (NPHS1)
Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115862570 (NPHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
I-set
Ig_2
ig
V-set
fn3
Ig_DSCAM-DSCAML_C
DUF4643
Motif
Other DBs
NCBI-GeneID:
115862570
NCBI-ProteinID:
XP_030730405
LinkDB
All DBs
Position
19:15647960..15665264
Genome browser
AA seq
1269 aa
AA seq
DB search
MENPEKDRGRRRRRAVVPVGATGRGPGLALRLPIWTPLLLLGLLMTGLAQVPVPASAPRG
FWALPENLTVVEGAAAELWCGVSAPGSTVQWAKDGLLLGPDPRIPSFPRYRLQGDPTKGE
FHLHIEACDLSDDAGYECQVSRSETGPELVSPRVILSILVPPKVLQLTPEAGSTVTWVAG
QEYLVSCVSGDAKPAPDITFLLSGQTISDISANVNEGSQEKLFTTEATARVTPRSSDNGQ
LLVCEGSSPALDTPIKASITMNVLFPPGPPVIEWPGLDEGHARAGQNLELLCMARGGNPL
ATLQWLKNGQPVSTAWGTEHTQAVARSMLVMIVRPEDHGARLSCEAYNSVSTGIQERGVT
LQVTFPPSAITILGSASQSENKNVTLSCITKSSRPRVLLRWWLGWRQLLSTEETVMDGLH
GGHISMSNLTFLARREDNGLTLTCEAFSEAFTKETFKKSLALNVKYPAQKLWIEGPPEGQ
RLRAGTRVRLVCLAIGGNPDPSLTWYKDSRTVTEPRPPQEPRRVQLGSLEKSGSTFSREL
VLITGPSDNQAKFTCKAGQLSASTQLVVQFPPTNVTILANASALRPGDALNLTCVSVSSN
PPVNLSWDKEGERLEGVAATPRSAPFKGSAAARSVLLRMSSRDHGHRVTCRAHSTELRET
VSAFYRLNVLYPPEFLGEQVLMVTAVEQGEALLPVSVSANPAPEAFNWTFRGYRLSPAGG
PRHRILSGGALQLWNVTRADDGLYQLHCQNSEGTAEALVRLDVHYAPIIRALQDPTEVNI
GGSVDIVCTVDANPILPEMFNWERLGEEEEDQSLDDMEKISKGSTGRLRIHHAKLTQAGA
YQCIVDNGVAPPARGLVRLVVRFAPHVEHPSPLTKVAAAGDSTSSATLHCRARGVPNIVF
TWTKNGVPLDLQDPRYTEHTYHQSGVHSSLLTIANVSAAQDYALFTCTATNPLGSDHTDI
QLVSISRPDPPLGLKVVSMTPYSVGLEWKPGFDGGLPQSFQVRYEALGTPGFLYVNVLPP
QATAFTLTGLQPSTRYRVWLLASNALGDSGIADKGSQISVTTPGLDQPSGEPDYQRPTEQ
PAGPSKLPLLPVLFAVGGLLLLSNASCVGGFLWQRRLKRLAEGISEKTEAGSEEDRVRNE
YEESQWTGDRDTRSSMVSTTDVEPYYHSMRDFSPQLPPMLEEVSYPRGVTGLKEENMAFP
GHVYDELERLYAPSGAWGPLYDEVPMGSCDLYWPEDRYEDTRGIYDQVAGDLDPMEPDAL
PFELRGQLV
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacccagagaaagacagaggcagacgcaggaggcgggcagtggtccctgtggga
gccacaggcagaggacctgggctggctctgaggctccccatctggacaccgctgctcctc
ttggggctgctgatgacaggcctggcccaggtgccagtccctgcctcagccccgcgaggc
ttctgggctctgcctgaaaacttgacggtggtggagggggctgccgctgagctgtggtgt
ggggtcagcgcccctggcagcacagtccaatgggccaaagatgggctgctcctaggccct
gatcctaggatccccagtttcccgcggtatcgcctgcaaggggaccctacgaaaggtgaa
ttccacctgcacattgaagcatgtgacctcagcgacgacgcagggtatgagtgccaggtc
agccgctcagaaacaggtcctgagctcgtgtcgcccagagtgattctctccatcctggtg
ccccccaaggtgcttcagctgacccccgaggcagggagcacggtcacgtgggtagctggg
caggagtacttggtcagctgtgtgtctggggatgcaaagccagcacctgacatcaccttc
ctcctgagtggacaaacaatttctgacatctctgctaatgtgaatgagggatcccaggag
aaactcttcaccacagaggccacagccagggtgacaccccggagctcggataatgggcag
ttactggtttgtgaggggtccagcccagctttggacacccctatcaaggcttcaatcacc
atgaatgttctgttccccccaggaccccctgtcattgagtggccaggcctggacgagggg
cacgcgagggcagggcagaacttggagctgctgtgcatggcccgaggggggaatccgcta
gccacactgcagtggctgaagaacggccagccagtgtccacagcctggggcacagagcac
actcaggcagtggcccgcagtatgttagtgatgatcgtgcggccggaagaccatggggca
aggctcagctgcgaggcctacaacagcgtatctacagggatccaggaacgcggggtcacg
ctgcaggtcacctttccccccagtgccattaccatcctgggatctgcatcccagtctgag
aacaagaacgtgacactctcctgcatcaccaagtccagtcgcccaagggtcctactgcga
tggtggctgggctggcggcagctgctgtccacagaggagacggtcatggatggcctgcat
ggtggccacatctccatgtctaacctgacattcctggcgcgacgggaggacaatggtctg
accctcacatgtgaggcctttagtgaggccttcaccaaggagaccttcaagaagtcactc
gccttgaatgtgaaatatcctgcccagaagctatggattgagggccccccagaggggcag
cgtctccgggctgggacccgggtgaggctggtatgtttggccattggaggcaatccagac
ccttccctcacctggtacaaggactcgcgcacagtgaccgagccgcggccaccgcaggag
ccacggcgggtgcagctgggaagtctggagaagtccgggagcaccttctcccgagaactg
gtactgatcaccggtccgtcggacaaccaggccaagttcacgtgcaaagccggccagctc
agcgcgtccacgcagcttgtggtgcagttccccccaactaacgtgacgatcctggccaac
gcgtcggcgctgcgccccggggatgccttaaacttgacgtgcgtcagcgttagcagcaac
cctccagtcaacttgtcgtgggacaaggagggggagaggctggagggtgtggccgccacg
ccccggagtgctccattcaaaggctccgctgccgctaggagcgtccttctgagaatgtca
tcccgcgaccacggccaccgcgtgacctgccgtgcccacagcaccgagctacgggaaacc
gtgagcgcgttctaccgcctcaacgtgctgtaccctccagagttcctgggtgagcaggtg
cttatggtgaccgcggtggagcagggcgaggcactgctacccgtgtccgtgtctgccaac
cccgccccggaggccttcaactggaccttccgcggttaccgcctcagcccagctggcggc
ccccggcatcgtatcctgtctggtggagctctgcagctatggaacgtgacccgcgctgac
gatggcctctaccagctgcactgccagaactcagagggcaccgctgaagctctcgtgagg
ctggacgtacactatgctcccatcatccgagctctccaagatcccactgaagtgaatatt
gggggctctgtggacatagtctgcactgttgatgccaatcccatccttcctgagatgttc
aactgggagaggctgggagaagaggaggaggaccagagcctggatgacatggagaagata
tcaaaggggtccacagggcgtcttcggattcaccatgccaagttgacccaggctggtgct
taccagtgcattgtggacaatggggtggcacctccagccagagggctggtccgtcttgtt
gttagatttgccccccacgtggagcatccctctcctctaactaaagtggctgcagctgga
gacagcactagttctgccaccctccactgtcgtgcccgaggtgtccccaatatcgtcttc
acttggaccaaaaatggggtccctctggatctccaggatcccaggtacacagagcacaca
taccaccagagtggtgtccacagcagtctcctgaccattgccaacgtgtccgcagcccag
gactatgccctcttcacgtgcacagccaccaaccccctcggctcggaccacaccgatatt
caactcgtcagcatcagccgccctgatccgccattgggattgaaggtcgtgagcatgacc
ccatactcggtggggctggagtggaagcctggctttgatgggggcttgccacaaagtttc
caagtcaggtatgaggctctggggactccagggtttctctacgtgaatgtcctaccaccc
caggccaccgccttcacactgactgggctgcaaccttctacacgatacagggtctggttg
ctggccagcaatgccctgggcgacagtggaatagctgacaaagggtcccagatctcagtc
accactccaggtctagaccaaccttctggagaacctgactaccagcggcccacagagcag
cccgcaggaccctcaaagctgcccctgctgcctgtgctgtttgctgttgggggtcttctg
ctgctttctaacgcctcctgtgtcgggggattcctctggcagcggagactgaagcgtctt
gctgagggcatctcagagaagacagaggcagggtcggaggaagaccgagtcaggaatgaa
tacgaggagagccagtggactggagaccgtgacactcgaagctccatggttagcacaaca
gatgtagagccttattaccactccatgagggacttcagcccccagcttccccccatgctg
gaggaggtgtcttatccccgaggtgtcacaggtcttaaggaggagaatatggcttttcct
gggcacgtgtatgatgagctggaaagactgtacgccccgtctggggcctggggacccctc
tatgatgaagtaccaatgggctcctgtgacctctactggcctgaagacaggtatgaagat
accagaggaatctatgatcaggtggcaggagatttggaccctatggaacctgatgctcta
ccctttgagctgaggggacagctggtgtga
DBGET
integrated database retrieval system
