Globicephala melas (long-finned pilot whale): 115863345
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Entry
115863345 CDS
T11080
Symbol
SHARPIN
Name
(RefSeq) sharpin isoform X1
KO
K20894
shank-associated RH domain-interacting protein
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04217
Necroptosis
gmf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115863345 (SHARPIN)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115863345 (SHARPIN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115863345 (SHARPIN)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
115863345 (SHARPIN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
115863345
NCBI-ProteinID:
XP_030732067
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All DBs
Position
17:complement(79344808..79349944)
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AA seq
484 aa
AA seq
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MSIVGEAGGSDGSNARAAPGTPGSRSQFPAGGGAQRPEATEAGSWGRAGSGPEMAPPADG
AAAASDAGSAAVLLAVHAAVRPLGAGPDAEAQLRRLQLSADPERPGRFRLELLGAGPGAV
SLEWPLESVSYTVRGPSQHELQPPPGGPGTLSLHFANPQEARRWAALVRGATVEGQNGSD
SLTPALGSETCPVSPPSLLEVPATKAPKPKVDLPWRPGDLMEKEDLAGHLTRAIEGGDEK
RAAHAAAILAQHHVALSIQLQEACFPPGPIRLQVTVEDAASSAHISLAVHPHSTIGALQE
QVSTGSGEPCWGDLGDIPTLWPQVFSEFGFPPAVQRWVIGRCLCVPEYSLAFYGVRRDGD
PAFLYLLSAPREAPGRNPQHPQKMDGELGRLFPQSLGLPQAPQPAGSSLPNPLQPGWPCP
SCTFINAPSRPGCEMCSTQRPCAWDPLPTASTQQLPKVTRREDGPSLPGPRSLDPLLNLS
GNLC
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcgtgggcgaagcgggagggtcagacggctccaacgctcgggcggcgcccgga
accccaggctcgcggtcccagtttccggccggtggaggcgctcagcggcccgaggccacg
gaagcgggctcgtggggccgggccgggagcggaccggagatggcgccgccggcggacggc
gcggctgcggcctccgacgctggctcggctgcggtgctcctggcggtgcacgccgcggtg
aggccgctgggcgcggggccggacgcagaggcgcagctgcggaggctgcagctgagcgcg
gaccccgagcgaccagggcgcttccggctggagctgcttggcgcggggcccggggcggtc
agtttggagtggcccttggagtccgtctcctacaccgtccgaggccccagccagcatgag
ctgcagcctccaccaggagggcctgggactctcagcctgcacttcgccaaccctcaggaa
gctcggcggtgggcagccctggtccgaggtgccaccgtggaaggacagaatggcagtgac
agcctgaccccagccctaggctcagaaacgtgccctgtttccccgcccagtctccttgaa
gtacctgcaaccaaggcccccaagcccaaggtggatcttccttggcgccctggagacttg
atggagaaagaggacctagcagggcacctgacccgggccatagagggtggggatgagaag
cgggcagcccacgcagcagccatcctggcccagcatcacgtggccctcagcatccagctc
caggaggcctgcttccctcccggccccatcaggctacaggttacagttgaagatgctgcg
tcctctgcccacatctcgctggcagtccacccccactccaccatcggggccctccaggag
caggtgagcacggggtctggggagccctgctggggggacctgggtgacattccgacactc
tggccccaggtattctcggagtttggcttcccaccggctgtgcagcgctgggtcatcggg
aggtgcctgtgtgtccccgaatacagccttgctttctatggggtccggcgggatggggat
cctgctttcctctacctgctctcagccccccgagaggccccaggacgcaatcctcagcac
ccccagaagatggatggggaactaggccgcctgtttcctcagtcactggggctgccccaa
gcccctcagccagctggctccagcctgcccaacccccttcagcccggctggccctgccct
tcctgcaccttcatcaatgccccaagccgacccggctgtgagatgtgcagcacccagagg
ccctgtgcttgggacccccttcccacagcctccacccagcagctaccaaaggtcacaagg
agagaggatggcccttcccttccaggcccaaggtccctggaccccctcctgaacctctca
gggaacctctgctga
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integrated database retrieval system
