Gordonia mangrovi: NWF22_00145
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Entry
NWF22_00145 CDS
T08472
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gmg
Gordonia mangrovi
Pathway
gmg00300
Lysine biosynthesis
gmg00550
Peptidoglycan biosynthesis
gmg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NWF22_00145
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NWF22_00145
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gmg01011
]
NWF22_00145
Enzymes [BR:
gmg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NWF22_00145
Peptidoglycan biosynthesis and degradation proteins [BR:
gmg01011
]
Precursor biosynthesis
Amino acid ligase
NWF22_00145
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DUF1611
Motif
Other DBs
NCBI-ProteinID:
UVF78346
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Position
complement(33160..34797)
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AA seq
545 aa
AA seq
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MASTRRKRTKVAAGMLRPTTVSPTPVSVLSASTGARVDLIGTVPADVAVTGVTLRGQDVQ
PGDLFAALPGDRTHGARFADQAVAAGATAVLTDPAGRAELSRVLGPDLACAVLVHPKPRT
VLGQLSARIYGHPSRRMKLIGITGTSGKTTTAYMVEAALLAAGHSVGLLGTVQTRIDGVA
QPSTLTTPEAPTLQALLATMLERGVDTVVMEVSSHALALGRVDGAHFAIGAFTNLSQDHL
DFHHTMRAYFDAKAQLFTPGSSTAAVRSVICVDDEWGRRMVEVARGDPRTGDRPGAPVTV
STGPVPAQWHAGPSTIDADGRQHAEVSVDGGAHHELTVPLPGRYNIANATTALAIAVAVG
VPTTTAVEAIAGVSVPGRLERVDRGQDFLVVVDYAHKPAALEAVIATLREQTRGRVAVVV
GAGGDRDTGKRPMMGEIAARGADLAIITDDNPRTEDPAEIRTEVLAGARSADLPPGSAEI
REIGDRAEAIWAATRWAQPGDTVLIAGKGHETGQEIDGMKHPFDDRVVAAEALDSARASI
GTEDS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgactcgccgtaagcgtacgaaggtcgctgcggggatgcttcggccgaccacc
gtgtccccgaccccggtgtcggtgttgtcggcgtccaccggagcccgcgtcgatctgatc
ggcaccgtgccggccgacgtggcggtcaccggcgtgaccctgcgcggtcaggacgtgcaa
ccgggtgacctgttcgcggccctgccgggggatcgcacccacggtgcccgattcgccgac
caggccgtggcggccggcgccacagctgtgctgaccgatccggccgggcgggcggagctg
tcgcgggtcctcggccccgacctggcgtgtgcggtcctcgtgcacccgaagccgcgcacc
gtcctcggtcagctcagcgcacgcatctacggtcatccgtcgcggcggatgaagctgatc
ggcatcaccggcacctccggcaagaccaccaccgcctacatggtggaggccgccctgctc
gccgccgggcactcggtcggactgctgggcacggtgcagacccggatcgacggcgtcgcc
cagccgagcacgctcaccacacctgaggcgcccaccctgcaggcactgctggcgacgatg
ctcgaacggggtgtcgacacggtggtgatggaggtgtccagtcacgcgctcgcgctgggt
cgggtcgacggcgcccacttcgcgatcggcgcgttcaccaatctctcgcaggatcatctc
gacttccatcacacgatgcgtgcgtacttcgacgcgaaggcccaactcttcaccccgggt
tcgtcgacggccgcggtgcggtcggtcatctgtgtggacgacgagtggggtcgacgcatg
gtggaggtcgcccggggcgatccacgaaccggcgatcgccccggagcgccggtcaccgtc
tcgacggggcccgtgcccgcccagtggcacgccggtccgtcgacgatcgacgccgacgga
cgccagcatgcggaggtcagcgtcgacggcggcgcgcaccacgaactcaccgttccgctg
cccgggcggtacaacatcgccaacgcgaccacggcactcgcgatcgcggtcgcggtgggg
gtgcccaccacgaccgcggtggaggcgatcgccggggtgtcggtgccgggccgtctcgaa
cgggtggatcgcgggcaggattttctcgtcgtggtcgattacgcgcacaaacccgcagcc
ctcgaagcggtgatcgcgaccctgcgggagcagacccgcggacgggtagcggtggtggtg
ggcgccggtggcgaccgggacaccggaaaacggccgatgatgggggagatcgccgcgcgg
ggtgccgacctcgcgatcatcaccgacgacaacccgcgcaccgaggacccggccgagatc
cggaccgaggtgctcgccggcgcccggtcggccgatctgccgcccggcagtgccgagatc
cgggagatcggtgaccgcgccgaggccatctgggccgccacccgctgggcgcaaccgggt
gacacggtgttgatcgccggtaagggacatgagaccggacaggagatcgacgggatgaag
catccgttcgacgaccgcgtggtggccgccgaggcgctcgactccgcccgcgcatccatc
ggcaccgaggactcgtga
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