Gadus morhua (Atlantic cod): 115529748
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Entry
115529748 CDS
T10832
Name
(RefSeq) transcription factor p65-like
KO
K04735
transcription factor p65
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04137
Mitophagy - animal
gmh04210
Apoptosis
gmh04218
Cellular senescence
gmh04620
Toll-like receptor signaling pathway
gmh04621
NOD-like receptor signaling pathway
gmh04622
RIG-I-like receptor signaling pathway
gmh04623
Cytosolic DNA-sensing pathway
gmh04625
C-type lectin receptor signaling pathway
gmh04920
Adipocytokine signaling pathway
gmh05132
Salmonella infection
gmh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115529748
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115529748
09143 Cell growth and death
04210 Apoptosis
115529748
04218 Cellular senescence
115529748
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115529748
04621 NOD-like receptor signaling pathway
115529748
04622 RIG-I-like receptor signaling pathway
115529748
04623 Cytosolic DNA-sensing pathway
115529748
04625 C-type lectin receptor signaling pathway
115529748
09152 Endocrine system
04920 Adipocytokine signaling pathway
115529748
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115529748
09171 Infectious disease: bacterial
05132 Salmonella infection
115529748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115529748
Transcription factors [BR:
gmh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
115529748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
115529748
NCBI-ProteinID:
XP_030194644
Ensembl:
ENSGMOG00000016783
LinkDB
All DBs
Position
17:11016481..11028679
Genome browser
AA seq
661 aa
AA seq
DB search
MITDAVYGWGQPSPISNQQPSKPYLEIIEQPKARGMRFRYKCEGRSAGSIPGEKTNDTTK
THPAIRVNNYSGPLRVRISLVTKNAPHKPHPHELVGKDCKHGYYEADLQARRVHSFQNLG
IQCVKKKDVTEAITCRLQTNNNPYNIPEAKVWEEEFDLNAVRLCVQATVTLPTGETLSLE
PVVSQPIYDNRAPNTAELKICRVNKHSGSCKGGDEIFLLCDKVQKEDIEVRFFKDSWEGK
GSFSQADVHRQVAIVFRTPAYHDDNLGGPVHVKMQLRRPSDREVSEPMDFQYLPADPDEY
RLMEKRKRTGEILQSLKISNIMPIVSNPQERRQIAAPRRTVQAKAPTMAVASGMNPVVRP
MAGVAKPPQQQQQQQPASSFSYIQPGQLFSVPPKVESTPASASSVSQLWNTAPLPKVPHA
LLPSYTTSSALCQPSPFSTAANTEFSTVNLSDLVDMSYPTFSVIATAAASSSSSSTSTST
SSSQQQQQPAPCSSSQFRVEDIPEFPSFSNGSILDGIMDDFEELLSQKLQAEGGIGGAPG
GPAHPALPQHQHQHQHQHQQQQHHHLQHQQPAGPSSSSASSTSSSSQNNNSTPGSSQTPT
DPGAMPGCTWMNYPNSIVNLLQSEGMMPGSPGPACQNPMLLEDFDMLTSADEERLMSLLK
E
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgatcacggacgcggtgtatggttggggtcagccgtctccgatcagcaaccaacaacca
agtaagccctacctggagatcattgaacagcccaaggccaggggcatgcgcttccgctac
aagtgtgaggggcgctcggccgggagcatccccggggagaagaccaacgacaccaccaag
acgcaccccgccatcagggtgaacaactacagcgggccgctgcgtgtccgcatctccctg
gtaactaagaatgccccgcacaagccccacccccacgagctggtggggaaggactgcaag
cacggctactacgaggcggacctgcaggccaggcgcgtccacagttttcagaacctgggc
attcagtgtgtgaagaagaaagatgtgactgaggccatcacttgcaggctacagaccaac
aacaacccctacaacattccggaggctaaagtgtgggaggaggagtttgacctgaacgcg
gtgcgtctgtgtgtccaggccaccgtcaccctgcccaccggggagacgctcagcctcgag
cccgtcgtctcacagcccatctatgacaaccgtgcccccaacacagcagagctgaagatc
tgcagggttaataagcactctgggagctgcaagggaggagatgagatcttcctgctgtgt
gacaaagtgcagaaagaggacatcgaggtgcgcttcttcaaggactcgtgggagggcaag
ggcagcttctcgcaggccgacgtccaccggcaggtggccatcgtgttccgcacgcccgcc
taccacgacgacaacctgggcgggcccgtccacgtcaagatgcagctccgccggccctcg
gaccgcgaggtcagcgagcccatggacttccagtacctccccgctgaccccgatgagtac
cggctgatggagaagaggaaacgcacgggagaaattctccagagcttgaagataagcaac
ataatgcccattgtctccaatccccaggagagacggcagatcgccgcgccgaggagaacg
gtccaggccaaagcgcccacgatggccgtagcttcaggcatgaaccctgtggtccgtccc
atggccggagttgccaagcccccccagcaacagcagcaacagcagccggcctcctccttc
tcctacatccagccgggacagctcttctccgtcccccccaaggtggagtccaccccggcc
tccgcctcctccgtcagccagctgtggaacacggcccccctgcccaaggtcccccacgcg
ctgctgccctcgtacaccaccagctccgccctgtgtcagccctcccccttctccaccgcc
gccaacacagagttctccaccgtcaacctctccgacctggtggacatgtcctaccccacc
ttctccgtcatcgccacggccgccgcctcctcctcctcctcctccacctccacctccacc
tcctcctcacagcagcagcagcagcccgccccctgctcctcctcccagttccgggtggag
gacatcccagagttcccgagcttcagcaacgggagcatcctggacggcatcatggacgac
tttgaggagctgctgagccagaagcttcaggctgaggggggcatcggcggggcacccggc
ggtccagcccaccccgccctgccccagcaccagcaccagcaccagcaccaacaccaacaa
caacaacaccaccacctgcagcaccagcagcccgcgggcccctcctcttcctccgcctcc
tccacctcctcctcctcccagaacaacaacagcactcccggcagcagccagactcccacg
gaccccggcgccatgcccgggtgcacgtggatgaactaccccaacagcatcgtcaacctg
ctgcagagcgagggcatgatgcccggctccccgggcccggcctgccaaaaccccatgctg
ctggaggactttgacatgctgacgtcggccgacgaggagcgcttgatgtccctcctgaag
gagtga
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