Gadus morhua (Atlantic cod): 115529877
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Entry
115529877 CDS
T10832
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmh01009
]
115529877
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115529877
Protein phosphatases and associated proteins [BR:
gmh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115529877
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115529877
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
115529877
NCBI-ProteinID:
XP_030194873
Ensembl:
ENSGMOG00000023952
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Position
17:13523805..13583746
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AA seq
1094 aa
AA seq
DB search
MNPMTQLYYKKVSYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSSLLIAIENENLEVMELLLDHGVHTGDALLYAIRKEVVGAVELLLN
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDSDQNEELDLKLCHDLAKLKLAIKY
HQKEFVSQPNCQQLLATLWYDGFPGWRRRHWVVKLVTCVIIGLLFPVFSMIYLLAPKSAL
GTFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTLVEWMILPWVVGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASEEPNNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSVWYLLTWLHQRLWARRHNPNGESHKCGNLREFTERHADSLIQNQHYQ
EVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SEPTKDEGAATSEEDSESCDGSGGGGGGGGGQKTKSVSFLEPQQAQESGQVLYGVSALVR
SISGLTGAEREGEGGGESGEVEVEERDLEEGVRWRYEEQDEAVPKSNGLKTTLGPPPPLT
MLPSSSSTSTSFSSSLASSLAHTRSRLQRLTSTRSKTDSFSSLSYLFSRAQRKAPPPARP
LHQSPSSYTISDGLLDADPGLGRGTRSETRLHELGRLDPSLSPLRTNGRDSLLTLPLPPP
CPCQSLHCASNLSESSARLLDSSEDVFQGLGGGVGRGGSGAGRGLMLMGGWVGPCEDVVD
DGCDVMEESVTTQL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacccagctgtactataagaaggtgagctactctccgtacagagaccgc
atccccctgcagatcgtcagggcggaggtagagctgtcagcggaggagagggcctacctc
accgccgtggagaaaggcgactatgcgggcgttaaacacgctctgcgcgaggcggaggtc
tactacaacatggacgtcaactgcctggaccctctgggccgcagctcgctgctcatcgcc
atcgagaacgagaacctggaggtcatggagctgctgctggaccacggcgtgcacacgggg
gacgccctgctctacgccatcaggaaggaggtggtgggcgccgtggagctgctgctcaac
caccgccggcccagcggggagaagcaggtgccctctctgatgatggacagccagttctct
gagttcactccggacataactcccatcatgctcgctgctcacaccaacaactatgagatc
attaaactgctggttcaacgcaaggtgaccattcccaggccacaccagatcagatgtgac
tgtgtagagtgtgtctccagctcagaggtggacagcctgaggcactcgcggtctcgtctg
aacatctacaaggccctggcctctccctctctgatcgccctgtccagtgaggaccccatc
ctcacagccttcagactgggctgggaactcaaagagctgagcaaggtggagaacgagttc
cgccaggagtacgaggagctgtcccagcagtgcaaactgttcgctaaagacctgctggac
caggcgcgcagctccagagagctggagaccatcctcaaccaccgcgactcggaccagaac
gaggagctggacctcaagctgtgccacgacctggccaagctcaaactggccatcaagtac
caccagaaagagtttgtatcccagcctaactgccagcagctcctggccaccctgtggtac
gacggcttccccggatggagaaggagacactgggtggtgaagctggtcacctgcgtcatc
atcggccttcttttccctgtcttctctatgatctaccttctggcccctaagagtgcgctg
ggcaccttcatcaagaagcccttcatcaagttcatctgccacacggcctcctacctcacc
ttcctcttcctcctgctgctggcctcccagcacatagccaggaccaacctgcacatgcag
ggcccgccgcccaccctggtggagtggatgatcctgccctgggtcgtgggcttcatctgg
gctgagatcaaggagatgtgggacgggggcttcacagagtacatccacgactggtggaac
ctgatggacttcgccatgaactccctgtacctggccaccatctccctcaagatagtcgcc
tatgtcaagtacaactcgtcccggccgagagaggagtgggagatgtggcatcctacgctg
atagcggaggcgctgttcgctatcgctaacatcttcagctcgctgcggctcatctctctg
ttcaccgctaactcccacctgggcccgctgcagatctccctcggacgcatgctgctggac
atcctcaagttcctcttcatatactgcctggtgttgctggcgtttgccaacggtctgaac
cagctctacttctactatgagaccaaagcctctgaagaaccaaacaactgtaagggcatc
cgctgtgagaggcagaacaacgccttctccacgttgtttgagacccttcagtccctgttc
tggtccatcttcggcctgctgaacctctacgtgaccaacgtgaaggcgcgccacgagttc
accgagttcgtgggtgccaccatgttcgggacgtacaacgtcatctccctggtggtgctg
ctcaacatgctcatcgccatgatgaacaactcctaccagctcatcgccgaccacgccgac
attgagtggaagttcgcccgcaccaagctgtggatgagctactttgatgaggggggcacg
ctgcccccccccttcaacatcatccccagccccaagtcggtgtggtaccttctcacctgg
ctgcaccagcggctctgggcccgccgccacaaccccaacggagagtcccacaagtgtggc
aacctgagggagttcacggagcggcatgccgacagcttaatccagaaccaacattatcag
gaagtgatccgtagcctggtgaagcggtacgtggcggccatgatacgcagcgcgaagacg
gacgaagggctcaccgaggagaactttaaggagctgaagcaggacatctccagcttccgc
tacgaggtcctcgatctgctcggcaaccgccgccccccgcggagacactactcctcctcc
agcgagccaacgaaagacgagggggcggcgacctcggaggaagacagcgaatcgtgcgac
ggcagcggcggcggaggaggaggaggaggaggtcagaagacgaagagcgtgagtttcctg
gagccgcagcaggcgcaggagtcggggcaggtcctgtacggggtgtcggcgctggtgcgc
tccatctccggcctgacgggggccgagagggagggggagggagggggggagtcgggggag
gtggaggtggaggagcgggacctggaggagggggtgaggtggcggtacgaggagcaggac
gaggccgtgccgaagagcaacggcctaaagaccacgctggggccccctccgcccctgacg
atgctcccctcctcctcctccacctccacctccttctcctcctccctcgcctcctcgctg
gcccacacccggagccggctgcagcgcctcacctccacccggagcaagacggactccttc
agcagcctctcctacctgttctcccgcgcccagcgcaaagccccgcccccggcccgcccg
ctccaccaatccccttcctcctacaccatctccgacggcctgctggacgccgacccgggc
ctgggccgcgggacccgcagcgagacgcgcctccacgagctgggccggctcgacccctcc
ctctccccgctgaggaccaatggcagggactcgctgctgacgttgcccctcccgccgccg
tgcccctgccaatcgctgcactgtgcttccaacctatcagagtccagcgctcgcctgctg
gactccagcgaggacgtgttccagggcttggggggaggagtcgggaggggggggagcggg
gcagggcggggcctcatgctgatgggcgggtgggtggggccctgcgaggacgtcgtggac
gacggctgtgacgtcatggaggagtcggtcaccacccagctatag
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