Gadus morhua (Atlantic cod): 115531182
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Entry
115531182 CDS
T10832
Symbol
plekhm1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04140
Autophagy - animal
gmh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115531182 (plekhm1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115531182 (plekhm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115531182 (plekhm1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmh04990
]
115531182 (plekhm1)
Membrane trafficking [BR:
gmh04131
]
SNARE
SNARE associated proteins
Others
115531182 (plekhm1)
Domain-containing proteins not elsewhere classified [BR:
gmh04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
115531182 (plekhm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
115531182
NCBI-ProteinID:
XP_030196156
Ensembl:
ENSGMOG00000026925
LinkDB
All DBs
Position
18:complement(1370050..1383941)
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AA seq
1121 aa
AA seq
DB search
MLATQTPDLPAEGQDIRQLIKEKLALSLKALQKRYVESDTAVTSDDSDANLLCCALEAIF
IHRLKNKYIRCEAGGRGRKDHRPLPQPSFWNLLKTVTHWDVITELEKLSFVGTEVGRSRA
WLRLALNHGLLECYLASLFRDGSELPAFYQPSALLLHPEDREVLLSYVQGLASLSFSLSY
KSAVLNQWTATPLALAGLCPASQADALLLNRQPRPATPGSKESRDTASQSSGSSEVGDPQ
KGIQEVPVGDQCPPGDQCPPGDQGPPGLKQPTLHSSTLSLETCGSSSQLSSSISSDSLLQ
GQELDLDLAPSRRAPRDVGVDPRGGGAPDSQDSTREASFVSSAGRDPCSGTSTSGGSSES
DGETRSPGPSPQSHGDPPAQKDPQNHQTPPSQQHQEVQHSPSRGGPTLSQTPPAPDPPTL
RVNNVDLSVPAGAEPLPAPRHPAGSGWDPDDPTGGPETLQKEPDGEACGEGYLQPQAISG
VRPRSACVVSRRQTSDSLSRVQSIPAQHSRSWISDDDIYKPHLGEESDPEEDPASGLQTN
EAPPPEGPPARVVHSRQPGLSNPFRGLLKLGHLERRGGMGIWKDYYCELSPFEFRLYLDD
DERTCAENCSLLRCEGARHTSPSGGRFTLSFPRKRLYLRAADRGEAEDWVDRIVEAAKKC
QPASRHDDHWEELQFADDREKDERAPPGSSSPAPASPLRRAPFSGGEKAAGAGADPGSAA
PGPPPTEELDWGRGGDEPEPDAIMEAVLYSHSSRGPGARGGAWEPLVFSLSLERLRGFGV
PEEGRKGGVRVSLPVEEIRDVVPDVSLGGPEFFKLLTSSGEMLRLRAQTAEEARSWRVLI
RGALDSYLESGEEGSEAGSGGSVRRLVQHALKEDGAMLEQMFSVPAHVGLDAQGFTCAGC
PRQIGLSQAKARLCDFSGRYYCDSCHHGDLSIIPSRMVHNWDLTPRPVSRRVLGLMGQVE
DEPLLNLEQLNPGLLGHARPMAQVHQLRLALCSLGDYLSACRSVARKTLLARMGARSYLL
ESSQLYSVRDLRQIAEGQYSAYLSSLVQVCSEHVQQCDLCSQRGFICQICHADDIIFPFQ
LDSTSRCGECKAVFHATCKLGSSSCPRCLRFRKYLERDLQD
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgctggccacacagactccagacctgcccgcagaaggccaggacatcagacagctgatc
aaggagaagctagccctgtccctcaaggcgctgcaaaagcgctacgtagagtcggacacg
gcggtgaccagcgacgacagcgatgctaacctgctgtgctgcgcactggaggccatcttc
atccaccgcctcaagaacaagtacatccgctgtgaggcgggggggcggggccgcaaggac
cacaggcccctcccccaaccctccttctggaacctcctgaagaccgtcactcattgggac
gtcatcacggagctggagaagctgagcttcgtgggcacggaggtgggccgcagccgggcc
tggctccggctggcgctgaaccacgggctgctggagtgctacctggcctccctgttccgg
gacggctcggagctgccggccttctaccagcccagcgccctgctgctgcaccccgaggac
cgcgaggtgctgctcagctacgtccagggcctggcctcgctctccttcagcctctcgtac
aagtcggccgtgctcaaccagtggacggccacgcccctcgccctggccggcctctgcccc
gcctcccaggccgacgccctcctgctcaaccgccagccccgccccgccacgcccgggagc
aaggagtcacgggacacggcgtctcagtcctcgggctcgtctgaggtaggggatcctcag
aaagggatccaggaggtacccgtaggagaccagtgccccccaggggaccagtgcccccca
ggggaccaggggcccccaggattgaagcagcccaccctgcactcctctaccctcagcctg
gagacgtgtgggtcgtccagccagctgtcctccagcatcagctctgacagcctcctgcag
ggccaggagctggacctggacctggcccccagccggagggccccccgagatgtcggcgtg
gacccccggggggggggtgccccagacagccaggactccaccagggaggcctcctttgtg
tccagcgctggccgggacccctgctccgggaccagcacctcggggggctccagtgagtcc
gacggggagaccaggagccctggcccctccccccagagccacggggaccccccggcccag
aaggacccccagaaccaccagacccccccgtcccagcagcaccaggaggtccagcacagc
ccgagccggggcggaccgaccctcagccagaccccgcccgcccccgaccccccaaccctg
agggtcaacaacgtggacctctccgtcccagctggggccgagccgctccccgcaccgcgc
caccccgcggggtcggggtgggaccctgacgatcccacggggggtcctgagacgctgcag
aaggaaccggacggagaggcgtgtggggaggggtacctgcagccgcaggccatcagtggg
gtccgcccccgctcggcctgcgtcgtcagcaggaggcagacgtcagactctctgtcgcgt
gtccaatcaatccccgcgcagcattcccgctcctggatctcggacgacgacatctacaag
ccgcacctgggggaggagtcggacccggaggaggaccccgcgtcgggactgcagaccaac
gaggctccgccccctgagggcccccccgccagggtggtccatagcaggcagcccgggctg
tccaacccattccgcgggctgctgaagctgggccacctggagcgccgtggggggatgggc
atctggaaggactactactgcgagctctcgcccttcgagttccgcctctacctggacgac
gacgagcgcacctgcgccgagaactgctccctgctgcgctgcgagggggcgcggcacacc
tcgccctcgggcggccgcttcacgctctccttcccccggaagcggctctacctgcgggct
gcggaccgcggcgaggccgaggactgggtggaccgcatcgtggaggccgccaagaagtgc
cagcccgccagtcgccacgacgaccactgggaggagctgcagttcgccgacgacagggag
aaggacgagagggccccgcccggctcgtcgtcccccgcccccgccagccccctgcgtcgc
gcccccttctccggcggggagaaggcggcgggagcgggggcggaccctgggtcggcggcc
ccgggtccccctcccacggaggagctggactgggggcgcgggggcgacgagcccgagccc
gacgccatcatggaggcggtgctgtactcccactcctcgaggggccccggggcccggggg
ggcgcctgggagccgctggtgttctccctgtccctggagcgcctgcggggcttcggggtg
ccggaggagggccggaaggggggggtccgggtcagcctgcccgtggaggagatccgggac
gtggtgccggacgtgtctctgggggggcccgagttcttcaagctgctgaccagctccggg
gagatgctgcggctgcgggcccagacggccgaggaggcccggtcgtggagggttctgatc
cggggcgcgctggactcctacctggagagtggggaggaggggtcggaggcggggtcgggg
ggcagcgtgcggcggctggtccagcacgcgctgaaggaggacggggcgatgctggagcag
atgttcagcgtgcccgcgcacgtcggcctggacgctcagggcttcacctgtgcaggttgc
ccccggcagatcggtctgtcccaggccaaagcgcggctgtgtgacttctccggccggtac
tactgtgactcctgtcaccatggtgacctgagcatcatcccctcccgcatggtccacaac
tgggacctcactccccgaccggtgtcccggcgggtcctcgggctcatgggccaggtggaa
gatgaacccctcctcaacctggagcagctgaacccggggctgctgggccacgcccggccc
atggcccaggtgcaccagctgaggctggcgctgtgttcgctgggagactacctgtcagcc
tgccgcagcgtagcccgcaagaccctcctggccaggatgggggcacgcagttacctgctg
gagtccagtcagctctacagtgtgagggacctccgccagatagccgagggccagtattca
gcctacctgtcgtcgctggtccaggtgtgctctgagcatgtgcaacagtgtgacctttgc
tcccagcgaggcttcatctgccagatctgccatgctgatgacatcatcttccccttccag
ctggacagcaccagcaggtgtggagagtgtaaggccgtgttccacgctacctgtaaactg
ggctcctcctcctgcccccgctgcctacgcttcaggaagtacctggagagagacctccag
gactga
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