KEGG   Gadus morhua (Atlantic cod): 115531294
Entry
115531294         CDS       T10832                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03420  Nucleotide excision repair
gmh04110  Cell cycle
gmh04114  Oocyte meiosis
gmh04120  Ubiquitin mediated proteolysis
gmh04141  Protein processing in endoplasmic reticulum
gmh04310  Wnt signaling pathway
gmh04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115531294 (rbx1)
   04120 Ubiquitin mediated proteolysis
    115531294 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115531294 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    115531294 (rbx1)
   04350 TGF-beta signaling pathway
    115531294 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    115531294 (rbx1)
   04114 Oocyte meiosis
    115531294 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gmh04121]
    115531294 (rbx1)
   03400 DNA repair and recombination proteins [BR:gmh03400]
    115531294 (rbx1)
Enzymes [BR:gmh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     115531294 (rbx1)
Ubiquitin system [BR:gmh04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   115531294 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     115531294 (rbx1)
   Cul2 complex
     115531294 (rbx1)
   Cul3 complex
     115531294 (rbx1)
   Cul4 complex
     115531294 (rbx1)
   Cul7 complex
     115531294 (rbx1)
   Cul8 complex
     115531294 (rbx1)
   Cul9 complex
     115531294 (rbx1)
DNA repair and recombination proteins [BR:gmh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      115531294 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115531294 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 115531294
NCBI-ProteinID: XP_030196326
Ensembl: ENSGMOG00000002046
UniProt: A0A8C5F3W2
LinkDB
Position
2:complement(95990..97740)
AA seq 108 aa
MAAAMDVDTPSGTNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcggcgatggatgttgatactcccagcggcaccaacagtggcgccagcaagaag
cgcttcgaagtgaagaagtggaacgccgttgcgctctgggcatgggacatcgtcgtggat
aactgtgccatctgtcggaaccacatcatggatctatgcatagagtgccaggccaatcag
gcctctgcaacgtccgaggagtgcaccgtggcctggggggtctgcaaccatgcgttccac
ttccactgtatctcccgctggctgaagaccagacaggtgtgtccactggacaacagagag
tgggagttccagaaatatggacattag

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