Gadus morhua (Atlantic cod): 115531374
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Entry
115531374 CDS
T10832
Name
(RefSeq) sodium channel protein type 4 subunit alpha A-like isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115531374
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115531374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
Lustrin_cystein
IQ
NOA36
CDC45
PKD_channel
Motif
Other DBs
NCBI-GeneID:
115531374
NCBI-ProteinID:
XP_030196456
Ensembl:
ENSGMOG00000002948
LinkDB
All DBs
Position
18:complement(1431072..1449380)
Genome browser
AA seq
1763 aa
AA seq
DB search
MVLNSYIILFSLFIMITILANCVFMTMSNPPPWSKTVEYVFTGIYTFEATTKVLARGFVI
GPFTFLRDPWNWLDFMVISMAYLTEFVDMGNVSALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKMVDVMILTVFALAVFALVGLQLFMGNLRQKCIRWPPPNNDTLLGDFSNATALNG
SLASNHTFNFVEYIENTDNQYYLEGSLDALLCGNSSDAGKCPEGYQCIKAGRNPNYGYTS
FDSFGWAFLALFRLMTQDYWENLFQLLLRAAGKTYMLFFVVIIFLGSFYLINLILAVVAM
AYEEQNEATLREAREKEEEFQRMLEQLRNQDQEAFVGSQASLTSKKSLSHHTEFEFDEEG
DGSEDVLKDCNGRIIPRLLIRVPTMTQPYCEEEVKQDEEGGSRGSALSVVHLEAPGLKHR
TASVLTVATVAAMEELEEAQRPCPPSWYRFADFFLKWDCCDVWVTSKNWVNFVVMDPFVD
LAITICIVLNTLFMAMEHYPMTPQFDHMLSVGNLVFTGIFTAEMFFKLIAMDPYYYFQVG
WNIFDSIIVTMSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALG
NLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIAVDCVLPRWHMHDFFHSFLIVFRILCGE
WIETMWDCMEVAGTGMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSTADEDGELNN
LQIAINRISGGVAWVKTRLRRLLAPLFLRVTSRLEGPKGGGAVEMNHLDAGEGPAASEDD
GTSHCLVEGRRGRPLDYDVVLTVPMAQGESDLENMDEDDEDDEDDEDDEEDDEDDEDDRG
QNVRSNGKLHSHVHDPFKLPSPWQLIRVTKDDGDSSECSTVDYQPPEHEPELEEEEEPEP
VDPESCFTDDCVRRWPCLSVDINQGRGKTWWNIRRTCFTIVEHDYFETFIIFMILLSSGA
LAFEDIYIERRRTIKIILEYADKIFTYVFIIEMVLKWVAYGFKTYFTNAWCWLDFFIVDV
SLISMGANLMGFSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVC
LIFWLIFSIMGVNLFAGKFYRCINTTSDELFLLEQVNNHSDCLALQQATGEARWVNVKVN
YDNVATGYLSLLQVATFKGWMDIMYAAVDSREVDEQPSYEINLYMYIYFVIFIIFGSFFT
LNLFIGVIIDNFNQQKKKFGDKDIFMTEEQKKYYEAMKKLGSKKPQKPTPRPTNLIQGLV
FDFISQQVFDIFIMVLICLNMVTMMVETDDQSPEKSDFLFKLNVAFIVVFTGECTLKLFA
LRQYFFKNGWNVFDFVVVILSIAGTMLSDIIEKYFVSPTLFRVIRLARIGRILRLIKGAK
GIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQAGIDDMFNFETFGGSI
VCLFEITTSAGWDSLLLPILNREAPDCDPDFENPGTDVRGNCGNPGMAIMFFCSYIIVSF
LVVVNMYIAIILENFNVAQEESGDALCEEDFEMFNETWEKFDLEGTQFLEYARLSDFCDA
LQMPLRVVKPNRLQLIEMDLPLVIGDRIHCLDVLLAVTQMVLGETVEMAAMRESIKAKFV
MSNPTSDSFAPITSTFRHKEEELAAAVVQRAYRRHLLRRAIRHASSMWRHKRMKVKEEDL
AEKEGLLARRMAVFYGSEVDLADQEVEQVDLEAPPSQEPVHVGPPNGPNLLVVPVEVTSE
VVLHSAPHRKALDFYEVLHESVV
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atggtccttaactcctatatcatattgttcagcttgttcatcatgataactattcttgcc
aactgtgtcttcatgacgatgagcaaccctcctccctggagcaagaccgtagagtatgtt
tttactggaatttacacgtttgaggcgacgacaaaggtgttggcacgaggcttcgttatt
ggaccattcacattcctaagagacccgtggaactggctggacttcatggtcatcagcatg
gcgtacctcactgagtttgtggacatgggcaacgtctcagcactgagaaccttcagggtc
ctgcgagccctcaaaaccatcactgtgattcctggtctgaagaccatcgtgggcgctctg
atccagtcggtgaagaagatggtggacgtcatgatcctgacggtgttcgcgctggccgtc
ttcgccctggtcggcctccagctcttcatggggaacctccggcagaagtgcatccgctgg
cctccccccaacaacgacacgctgctgggggacttcagcaacgccacggccctcaacggc
tcgctcgcctccaaccacaccttcaactttgtggaatatatcgaaaataccgataaccaa
tactatctggagggcagtttagacgctctgctctgcggtaacagctcggacgctgggaag
tgtcctgagggctaccagtgtataaaggcggggaggaaccccaactacggctacaccagc
tttgactccttcggctgggccttcctcgctctcttcaggctcatgacccaggactactgg
gagaacctctttcagctgctcctgcgcgcggcggggaagacctacatgctgttcttcgtg
gtgatcatcttcctgggctccttctacctcatcaacctcatcctggccgtggtggccatg
gcgtacgaggagcagaacgaggccacactgcgggaggctcgggagaaggaggaggagttc
cagcggatgctagagcagctgaggaaccaagaccaggaagctttcgtaggcagccaagcg
tctctgaccagtaagaagtccctgagtcaccacacagagtttgagtttgacgaggaaggt
gacggcagcgaagacgtactgaaggactgtaacggtcgaatcatcccgcgacttctcatc
agggtgcccacaatgacccagccgtattgtgaagaggaggtgaagcaggacgaagagggg
gggtctcggggctccgccctcagtgtggtgcacctggaggcgccgggcctcaaacaccga
actgccagcgttctcaccgtcgccacggtcgccgccatggaagagctggaggaggcccag
agaccctgccctcccagctggtaccgattcgccgacttcttcctgaagtgggactgctgc
gacgtctgggtgacgtccaagaactgggtcaacttcgtggtgatggacccctttgtggac
ctggccatcaccatctgcatcgtcctcaacaccctgttcatggccatggagcactaccct
atgacgccccagttcgaccacatgctgtccgtggggaacctggtgttcactgggatcttc
acggccgagatgttcttcaagctgatcgccatggacccctactactacttccaggtgggc
tggaacatcttcgacagcatcatcgtgaccatgagcctggtggagctgggcctggccaac
gtccagggtctgtccgtcctccgctccttccgtctgctgcgtgtcttcaagctggccaag
tcgtggcccaccctcaacatgctgatcaagatcatcggtaactccgtgggcgccctgggc
aacctgaccctggtgctggccatcatcgtcttcatcttcgcggtggtgggcatgcagctc
ttcgggaagagctacaaggagtgcgtgtgcaagatcgccgtggactgcgtgctgccgcgc
tggcacatgcacgacttcttccactccttcctcatcgtgttccgcatcctgtgcggcgag
tggatcgagaccatgtgggactgcatggaggtggcgggcaccggcatgtgcctcatcgtc
ttcatgatggtcatggtgatcggaaacctggtggtgctgaacctgttcctggcgctgctg
ctcagctcgttcagcggggacaacctgtcgaccgcggacgaggacggcgagctcaacaac
ctgcagatcgccatcaaccggatctccgggggcgtggcctgggtgaagacccgcctccgg
cgcctgctcgctccgctgttcctgcgcgtcaccagccgcctggagggacccaaggggggc
ggggcggtggagatgaaccacctggacgccggcgagggtccggcagccagcgaggatgat
gggacatctcactgtctggtggagggccggcgggggcgaccgctggactacgatgtggtc
ctcaccgtccccatggcccagggggagtcagacctcgagaacatggatgaggacgatgag
gacgatgaggacgatgaggacgatgaagaggatgatgaggatgatgaggatgatcgaggg
cagaatgtgcgttccaatggaaaactacattctcatgtacatgatcctttcaaacttcca
tctccctggcagctgattcgcgtaaccaaggacgacggagactcttcggagtgcagtacc
gtcgactaccagccccccgaacacgaacccgagctggaggaagaggaggagccagaaccg
gttgatccggagtcctgcttcactgacgactgcgtgcggcggtggccctgtctgagcgtg
gacatcaaccagggccggggcaaaacctggtggaacatccggagaacctgcttcaccatc
gtggaacacgactatttcgagaccttcatcatcttcatgatcctgctcagtagcggagcg
ctggcgtttgaggacatctacatagagcgccgtcggaccatcaagataatcctggagtac
gccgacaagatctttacctacgtcttcatcatagagatggtcctcaagtgggtggcgtac
ggcttcaagacctacttcaccaacgcgtggtgctggctggacttcttcatcgtggatgtg
tctctgattagcatgggtgctaatttgatgggcttctcagacctgggaccaatcaagtcc
ctaaggaccttgagggcgctcaggccgctccgtgccctctccagattcgaggggatgagg
gtggtggtgaacgccctggtgggggccatcccgtccatcttcaacgtgctgctggtttgt
ctgatcttctggctgatcttcagcatcatgggcgtcaacttgtttgccggcaagttctac
cgctgcatcaacaccacgtcggacgagctgttcctcctcgagcaggtcaacaaccacagc
gactgcctggccctgcagcaggccaccggagaggcccgctgggtcaacgtcaaggtcaac
tacgacaacgtcgccacgggttacctgtccctgctgcaagtggccacattcaaaggttgg
atggacataatgtatgctgctgtggactcgcgagaggtggatgaacagccttcctatgaa
atcaacctctacatgtacatatattttgtcatattcatcatcttcggatcctttttcact
ctcaaccttttcatcggtgtgattattgacaacttcaaccagcagaagaagaagtttgga
gacaaggacatcttcatgactgaggaacagaagaaatactatgaagccatgaagaaacta
gggtccaagaaacctcagaaaccgaccccccgacccacgaacctgatccaaggtttggtg
ttcgacttcattagccagcaagtctttgacatctttatcatggtgctgatctgcctcaat
atggtaaccatgatggtggagacagacgaccagagtcctgaaaagagtgacttcctcttc
aagctcaacgtggccttcatcgttgtcttcaccggggagtgtaccctgaagctgtttgct
ttgcggcagtacttcttcaagaatgggtggaacgtttttgactttgtcgtcgtcatcttg
tccatagccggcacgatgctttctgacatcatagagaagtactttgtgtcacccactctg
ttccgagtcatccgattggccagaatcggcaggatcctgcgccttatcaaaggagccaag
ggcatccgcaccctgctgtttgccctcatgatgtcacttcctgccctcttcaacattggc
ctgctgctgtttctcatcatgttcatcttttctatatttggcatgtccaacttcgcctat
gtcaaaaagcaggccggtatcgacgacatgttcaactttgagacgttcgggggcagcatc
gtgtgtctgttcgagatcaccacctctgcgggttgggacagcctgctgcttcccatcctg
aaccgggaggcgcccgactgcgaccccgacttcgagaacccaggcacggatgtgcggggg
aactgcgggaaccccggcatggccatcatgttcttctgcagctacatcatcgtctccttc
ctggtggtggtcaacatgtacatcgccatcatcctggagaacttcaacgtggcgcaggag
gagagcggggacgcactgtgcgaggaagacttcgagatgttcaacgagacctgggagaag
tttgacctggaagggacccagttcctagagtacgcccgcctgtcggacttctgtgacgcg
ctgcagatgccgctgcgggtggtaaagccgaaccgcctgcagctgatcgagatggatctt
ccgctggtgatcggagaccgcatccactgcctggacgtcctgctggcggtcacgcagatg
gtgctgggagagacggtggagatggccgccatgcgcgagagcatcaaggcgaagttcgtc
atgagcaaccccacctctgactcattcgcccccatcaccagtaccttccgccacaaggag
gaggagctggctgccgcggtcgttcagcgtgcgtaccgcaggcacctcctcaggcgcgcc
atccgccacgcctcctccatgtggcgccacaagaggatgaaggtcaaggaggaggacctc
gctgagaaggaggggttgctggccaggcggatggctgtgttctatggtagcgaggtggac
ctggccgatcaggaggtggagcaggtggatctagaggctcctccgagccaagaacccgtt
catgttgggcccccaaacgggcccaacctcctggtggtccccgtggaggtgaccagcgag
gtggtgttgcactcggccccccaccgcaaggccttggacttctatgaggtccttcatgaa
tctgtggtataa
DBGET
integrated database retrieval system
