Gadus morhua (Atlantic cod): 115531389
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Entry
115531389 CDS
T10832
Symbol
rfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00514
Other types of O-glycan biosynthesis
gmh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115531389 (rfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115531389 (rfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gmh01003
]
115531389 (rfng)
Enzymes [BR:
gmh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115531389 (rfng)
Glycosyltransferases [BR:
gmh01003
]
Glycan extension
O-Glycan
115531389 (rfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
DUF1180
Adeno_E3A
Motif
Other DBs
NCBI-GeneID:
115531389
NCBI-ProteinID:
XP_030196486
Ensembl:
ENSGMOG00000000374
UniProt:
A0A8C5BHB1
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Position
18:complement(7924985..7935091)
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AA seq
401 aa
AA seq
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MHVASVGVSKLCFLLSLALCGLLLILIPAFQAPQRRQGDPPQPRPRARPSWAGSAGVAAP
DHLQRSGIGIGSTGLRKRSKEPGATTSGDYEPWRRGADALRSPAGGLLPQGEEGGLKGLG
RGSRDPLNPKDVFIAVKTTKKYHRSRLELLLQTWGSQAKEQTYIFTDGEDSELRKRAGGV
NIINTNCSAAHTRQALCCKMSVEYDKFIESQKKWFCHVDDDNYVILPSLLRLLSSYHPSQ
DVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSPWASLGNFIST
AEKIRLPDDCTIGYIIEALLEVRLAHTYLFHSHLENLQKLPTDTVLDQVTLSYGGFENRR
NVVAVGGPFSLAEDPSRFKTIHCLLYPDTDWCLAGNPGGHF
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtggcgtcggtgggcgtcagcaagctctgcttcctgttgtctctggcgctctgc
ggcctgctgctgatcctcatccccgccttccaggccccccagcgccgccagggggatccg
ccgcagccccggccccgcgcgaggccctcctgggcgggcagcgccggtgtggcggccccc
gaccacctccagaggtcgggtatagggataggtagtacggggctacgcaagagatccaag
gagcctggagctaccaccagcggggactatgaaccgtggaggaggggcgccgatgccctc
cgaagcccagcgggaggcctcctcccgcagggggaggagggtggactcaaggggttgggt
agggggtcccgggaccctctcaatccaaaggatgtgttcattgctgtgaagaccaccaag
aagtaccaccgctccaggctggagctgctcctccagacatgggggtcccaagctaaagag
cagacatatatattcactgacggtgaggacagcgagttacgaaaaagagcaggaggggtc
aacatcatcaacaccaactgctccgccgcacacacacgccaggccctctgctgcaagatg
tctgtggagtacgacaagttcatcgagtctcagaaaaagtggttctgtcacgtggacgac
gacaactatgtgatcctccccagtctgctgcgcctgctgtcctcctaccaccccagccag
gacgtgtacctgggccggcccagcctggaccaccccatcgaggccgccgagagggtcaag
agcgacggatcggtgtctgtgaagttctggtttgcaaccggtggagctgggttctgcatc
agccgaggtctggcgctgaagatgagcccctgggcgagtctgggcaacttcatcagcacg
gcggagaagatccgtctccctgacgactgcaccatcggttacatcatcgaggcgttgctg
gaggtgcggctggcgcacacgtacctgttccactcccacctggagaacctgcagaagctg
cccacggacacggtgctggaccaggtgacactgagctatggagggtttgagaacaggagg
aacgtggtcgcggtgggggggcctttttctctggctgaagacccgtcacggtttaagacg
atccactgcctgctgtacccggacacagactggtgcctcgcggggaacccaggaggacac
ttctga
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