Gadus morhua (Atlantic cod): 115532091
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Entry
115532091 CDS
T10832
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115532091
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
115532091
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
115532091
NCBI-ProteinID:
XP_030197463
Ensembl:
ENSGMOG00000009936
LinkDB
All DBs
Position
2:925238..946122
Genome browser
AA seq
1612 aa
AA seq
DB search
MLTILANCVFMTLSDPPAWGKTVEYVFTGIYTFEATVKVVARGFSIGPFTFLKDPWNWLD
FMVISMAYLTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKKLANVMILT
VFCLSVFALIGLQLFMGNLRQKCVVWPPLFLNDSLVDNFNGTDNSTFDFHQYINNPENYY
YRNNDMDPLLCGNSSDAGQCPEGFNCMKAGENPNHGYTSYDTFGWAFLALFRLMTQDFWE
NLFQLTLRAAGKTYMMFFVVVIFLGSFYLINLILAVVAMAYAEQNEASLAEAKQKEEEYA
GVMEALKQRQEEQTIANKAHPEDSAALDQNHTEANDFEEDQRPCPPCWYVFADVCLKWDC
CGCWRWLKGWLYFIVMDPFVDLGITVCIVLNTVFMAMEHYPMTPAFEHMLSVGNLVFTGI
FTAEMVLKLLAMDPYYYFQVGWNIFDSIIVTMSLVELGLADVQGLSVLRSFRLMRVFKLA
KSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRECVCKIAEDCELP
RWHMTDFFHAFLIIFRVLCGEWIETMWDCMEVAGIPMCLTIFMMVMVIGNLVVLNLFLAL
LLSSFSGDNLAAIEEDGENNLQIAVNRITNGIAWTKTKALTVIRSLLAKNTEPAQTAENE
EEETKEYLSLMGVDPEPPRSPPEPSNPEAPWTRPDGLSSNYSNSNYGNIITLRVPMATAE
SDCEPEEEEEEEEEEEEEEDLSEGEDHSSVCSTVERLPEADENEEEEEHDANTPEDCYSA
NCYGRYPCLDVDTSQGWGKTWFTIRRTCFIIVEHNYFETFIIFMILLSSGALAFEDIYLE
QRRVIKTLLEYADQVFTYVFIVEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLTANL
LGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSI
MGVNLFAGKFYYCFNSTSESMMLPEEVNNRSECLALAEIDPTIHWRNLKVTYDNVGMGYL
SLLQVATFKGWMDIMYGAVDSREVEQQPAYEANLYMYIYFVIFIIFGSFFTLNLFIGVII
DNFNQQKSKLGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNMCQGLVFDLVTKQFF
DIFIMVLICLNMVTMMVETDEQSPEKEEILFLVNLVFIVVFTTECCLKLFALRQHFFAVG
WNVFDFVVVILSILGILLVDLIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFAL
MMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKEAMVDDMFNFETFGNSIICMFMITTS
AGWDGLLFPILNSAPPDCDPDVENPGTDVRGNCGNPLVGIVFFCSYIIMSFLVVVNMYIA
IILENFNVATEESADPLCEDDFEMFYETWEKFDPDASQFIQYSALSDFCDTLKDPLRIPK
PNAMKLINMDLPLVPGDKIHCLDILLALTALVLGDSEGMDALKASMEEKFMANNPSKVSY
EPISSTLKRKQEEVAALVIQRAFRKHLWRRTVHHASYTYRGQREGHAGPQPAPESKGLIF
QRIGELYGDGQKDGPPDTPPTDATEECLVPAAVELHHEVVLQCRPPDSESVV
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccatcctcgccaactgtgtcttcatgaccctgagcgaccctccagcctggggc
aagaccgtggaatatgttttcaccggcatctacacctttgaggccacggtgaaggtggtg
gcccgaggcttctccatcgggccgttcaccttcctcaaagacccctggaactggctggac
ttcatggtcatcagcatggcttacctaaccgagtttgtggacctgggaaatgtgtcagca
ttgaggacattcagagtcctgagagctcttaagaccatcaccgtcatccctggcctgaag
accatcgttggtgccctcatccagtcggtgaagaagctcgctaacgtcatgatcctgacc
gttttctgcctgagtgtctttgctctgatcggtctccagctcttcatgggaaaccttcgt
cagaaatgtgttgtgtggcctccgctgtttctcaacgacagcctcgttgacaacttcaac
ggcaccgataactcgaccttcgacttccaccagtacatcaacaacccggagaactactac
tacagaaacaacgatatggaccctcttctgtgtgggaacagctccgacgcgggccagtgt
ccggagggcttcaactgcatgaaggcgggagagaacccaaaccacggctacaccagctac
gacacgttcggctgggccttcctcgccctcttcaggcttatgacccaagacttctgggag
aacctcttccagctgacccttagggctgcggggaagacctacatgatgttcttcgtggtg
gtgatcttcctgggctccttctacctcatcaacctcatcctggcggtggtggccatggcg
tacgccgagcagaacgaggccagcctcgcagaggccaagcagaaggaggaggagtacgcc
ggcgtcatggaggccctgaagcagaggcaggaggagcagaccattgcaaataaagcgcat
ccagaagattcggctgcactcgatcaaaaccacactgaggcaaacgactttgaggaggac
cagcggccgtgccccccgtgctggtacgtgttcgctgacgtgtgtctgaagtgggactgc
tgcggctgctggcgctggctgaagggatggctgtacttcatcgtcatggaccccttcgtg
gacctgggcatcaccgtgtgcatcgtgctcaacacggtgttcatggccatggagcactac
cccatgacccctgccttcgagcacatgctgagcgtgggcaacctggtgttcactggaatc
ttcacagctgagatggtcctcaaactgctggccatggatccctactactacttccaggtt
ggctggaacatatttgacagtatcatagtgaccatgagtcttgtggagctgggattggct
gatgtccagggtctgtctgtgctacggtccttccgattgatgcgtgtgttcaagctggcc
aagtcctggcccaccctcaacatgctgatcaagatcatcggcaactcggtgggtgcgctg
gggaacctgaccctggtgctggccatcatcgtcttcatcttcgccgtggtggggatgcaa
ctgtttgggaagtcgtaccgggagtgcgtgtgcaagatcgccgaggactgcgagctcccg
cgctggcacatgacagacttcttccacgcgttcctcatcatcttcagggtgctgtgtggg
gagtggatcgagaccatgtgggactgcatggaggtggcgggcatccccatgtgtctgacc
attttcatgatggtcatggtgatcgggaacctggtggtattaaatctctttctggccttg
ctactgagctcattcagtggagacaatctagctgcaatcgaggaagacggcgagaacaac
cttcagatcgctgtcaacagaatcaccaacggcatcgcctggaccaaaacgaaggccctt
acagtcataaggagtctgttggccaagaacaccgaaccagcacagacggctgagaacgaa
gaggaggagacgaaggagtatctgtcgttgatgggcgtggacccagagccaccccggtct
ccgccagagccctcgaaccctgaggcgccctggaccagaccggacggcctgagcagtaac
tatagcaacagtaactatggcaacatcatcacactgagggttcccatggccaccgcagag
tctgactgtgagcctgaagaggaggaggaggaggaggaggaggaggaagaggaggaggat
ctttctgagggtgaagatcactcatcagtttgcagtacagtggagagacttccagaggct
gatgagaacgaggaggaggaagaacatgatgctaacacgcctgaagactgctatagtgcc
aattgttacggccgttacccctgcctggacgtggacacctcccagggctgggggaagacc
tggttcaccatcagacggacctgcttcatcatcgtggaacacaactactttgagaccttc
atcatcttcatgatcctgctcagtagtggtgctttggcctttgaggacatctacctggag
cagcggcgcgtcataaagacgctgctggagtacgcggaccaggtgttcacctacgtcttc
atcgtggagatgctcctgaagtgggtggcgtacggcttccagacgtacttcaccaacgcc
tggtgctggctcgacttcctcatcgtggacgtctctctggtgtctctgaccgctaacctc
ctgggttattctgaactgggagccatcaagtctctgaggacgctgagggccctgagaccg
cttagggccctgtcgcgctttgagggcatgagggtggtggtgaacgccctggtgggggcc
atcccgtccatcttcaacgtgctgctggtgtgtctgatcttctggctgatcttcagcatc
atgggcgtcaacctgttcgccgggaagttctactactgcttcaactcgacgtcggagagc
atgatgctgccagaggaggtcaacaaccgcagcgagtgcctggccctggccgagatcgac
cccaccatccactggaggaacctgaaggtcacctacgacaacgtgggcatgggctacctg
tcgctgctgcaggtggcgacctttaagggctggatggacatcatgtacggggcggtggac
tccagagaggttgagcagcagccagcatatgaagccaacctctacatgtatatctacttc
gtcatcttcatcatcttcggctccttcttcaccctcaaccttttcattggtgttattatt
gataacttcaaccagcagaagtccaagctgggagggaaagacatctttatgacagaggag
cagaagaaatactacaacgcaatgaagaaactaggctccaagaaacctcagaaacccatt
ccccggccaacgaatatgtgccaagggttggttttcgacttggttacaaagcagtttttt
gacatcttcatcatggtgttgatctgtctcaacatggtgaccatgatggtggaaacagac
gaacagagtcctgagaaggaagagattctgtttttggtcaatctggtcttcatcgtggtc
ttcaccactgaatgttgtctgaagctcttcgctctcaggcagcatttctttgccgttgga
tggaacgtctttgactttgtggttgtaattctctccatcttaggcatcctcctcgtcgac
ctcatagagaagtactttgtctcgccgacgctcttccgtgtgattcgcttagcccgcatc
ggccgcgtcctccgtctcatccgcggcgccaagggcatccgcacgctcctgttcgctctg
atgatgtcactccctgccctgttcaacatcgggcttctcctcttcctcataatgttcata
ttttccatcttcggcatgtcaaactttgcctacgtgaaaaaagaggccatggtcgacgac
atgttcaactttgagacctttgggaacagcatcatctgcatgttcatgatcaccacgtcg
gccgggtgggacggcctgctcttccccatcctgaactccgccccccccgactgtgacccc
gacgtcgagaacccggggacggatgtcaggggcaactgtggcaaccccttggtgggcatc
gtgttcttctgcagctacatcatcatgtccttcctggtggtggtgaacatgtacatcgcc
atcatcctggagaacttcaacgtggcgaccgaggagagcgccgaccccctgtgcgaggac
gactttgagatgttctacgagacctgggagaagtttgaccccgacgcctcccagttcata
cagtacagcgcgttgtcggatttctgtgacacgctgaaggatcccctgaggatccccaaa
cccaacgccatgaagctgatcaacatggacctgcccctggtccccggggacaagatccac
tgtctggacattctgctggctctcactgccctggttctgggcgattcggaaggaatggac
gccctcaaagcgagcatggaggagaagttcatggccaacaacccgtccaaggtgtcctac
gagccaatcagcagcacgctgaagaggaagcaggaagaggtggcggcgctggtcatccag
agagccttccggaagcacctgtggcgccggacggtgcaccacgcctcctacacctaccgg
gggcagcgcgaggggcacgccggcccccagcccgcgcccgagtccaagggcctcatcttc
cagcgaataggagagctgtatggagacgggcagaaggacggtccgccggacacgcccccg
acagacgccaccgaggaatgtcttgtcccggcggccgtagaactccatcacgaggtggtg
ctccagtgcagacctccagactctgagtccgtagtctga
DBGET
integrated database retrieval system
