Gadus morhua (Atlantic cod): 115532118
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Entry
115532118 CDS
T10832
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04260
Cardiac muscle contraction
gmh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115532118
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115532118
04261 Adrenergic signaling in cardiomyocytes
115532118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115532118
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115532118
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
115532118
NCBI-ProteinID:
XP_030197517
Ensembl:
ENSGMOG00000018874
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Position
19:17363157..17455959
Genome browser
AA seq
1086 aa
AA seq
DB search
MDTSTFSVSLLLLAAMGSVSVGEFPTEQMIKEWADQMQKDLISLTDTASGMDSLIESYHN
HRDRFKVESNSPTDLVAKAAENIEKLLLTRSQALKRLASEAEKYQMEHEWRDDYTEDEII
YYNSKDGINQTNKRFVPDDFQDDPDFKRKVSYNTTAVHIPTDIYNGSTIVLNELNWTEAL
EDVFRKNKEEDPSLLWQVFGSATGLARFFPASPWMDSSKTQQKIDLYDVRRRPWYIQGAA
SPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVSFHETAKVAACFQNLVQ
ANVRNKKILKVAVQGITAKGITNYRGGFEKAFEQLALMNASRANCNKIIMLFTDGGEEKA
TEIFNKYNSDKKVRIFTFSVGQHNYDKGPIQSMACENRGYYYEIPSIGAIRINTQEYLDV
LGRPMVKAGQKSKQVQWTNVYLDALELGLVITGTLPVFNRTNTRADKERGVKKPQSQLIL
GVMAVDVSLEDIKRLTPRFTFGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDFLDA
ELEDEVKVEIRQKMIDGETGDHMISTLVKSQDERYIDRGLRSYTYAPVKGSDYSLALVLP
GYSMHYIRADIGDTITQAKSNLGKNVTESLLAFEEHGHTFIAPRDYCKDLKPLKNNTAFL
KEFLDYIDRKTPNNPMCNVELVNRLLLDAGITHGLSQIWKERELQHGVLARFVATDGGIT
RVYPKSAGQYWTENAETYESSFYKRNLDNDLYIFTPTPWSPTAAYENGTEEAILVSRAVD
LTIDDITLKPAVVGVKLDIGVWMTSFINTTQRPNCKDEICGCQRNDEYVDCVILDDGGFL
VMSNQDNYMDQIGRFFGVMDPTLMLDLVNSSLYTFNKTFDYQSLCDPEKETRGAGPRSVY
VPTIADMLNIGWWATAATWSIMQQMLVSLTFPNFMEAADVEEDLSDSMSKEGCITQQTQY
FFESSELSFKGTVGCDNCSRIYHAEKLPRTNLVFIIADARHTCVQCEGSPLVQDEQPSTG
PNPCFLARNPRYRKGPTNCFDDNTKEQDFGCGGAAALSPSLWTLVGVQMLLLWTMSGNRS
PAHVPS
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggatacctccactttttccgtcagcctgttactcctggccgcgatggggtccgtctcc
gtgggagagttcccgacagaacaaatgatcaaagaatgggcggaccagatgcagaaggac
ctgatctcattaacggacacagccagcggcatggacagcctaatagagagttaccacaac
cacagagatcgcttcaaggtggagtccaacagccccaccgatctggttgccaaggcagcg
gagaacatcgagaagctgctgttaacgcgctcccaggcgctaaagagactggcttcagaa
gcagagaaatatcagatggagcacgagtggagggatgattatacggaagacgaaattatt
tactacaactccaaagatggcattaaccagacgaataaacgctttgtcccagacgacttc
caggacgaccccgacttcaaacggaaggtgtcctacaacaccaccgccgtgcacatcccc
acggacatatacaatggctccaccatcgtgctgaatgagctgaactggaccgaggcgttg
gaggatgtgttccgcaagaacaaagaggaggacccctctctgctgtggcaggtgttcggc
tctgccaccggattggctcgcttcttcccagcgtccccctggatggactccagtaagacc
cagcagaagatcgacctgtacgacgtgcgcaggcggccctggtacatccagggagcagcc
tctccaaaggacatgctgatcctggtggatgcgagcggcagcgtgtcaggcctcaccctg
aagctgatccggacgtcggtcagcgagatgctggagacgctctctgacgacgactacgtc
aacgtggtgtctttccatgagacggccaaggtggcggcgtgcttccagaacctggtgcag
gccaacgtcaggaacaagaagatcctgaaggtggccgtgcagggcatcaccgccaagggc
atcaccaactaccgcgggggcttcgagaaggccttcgagcagcttgccctgatgaacgcg
tccagggctaactgcaacaagatcattatgctcttcactgacggaggagaggaaaaggca
acggagatctttaacaaatacaattctgacaagaaggtgcgcatcttcacattctcagtc
gggcagcacaactacgacaagggaccaatccagtcgatggcctgcgaaaacagaggctac
tactacgagattccatcgataggtgccatcagaataaacactcaggagtacctggatgtt
ctgggacggcccatggtcaaggccggccaaaagtctaagcaagttcaatggactaacgtc
tacctggatgccctggaactgggcctggtcatcaccggcaccctgcccgtcttcaacagg
accaacacccgggcggacaaagagagaggcgtgaagaagccccagagccagctgatcctg
ggcgtgatggccgtcgacgtctccctggaggacatcaagaggctgacgccgcgattcacc
tttggacccaacggctactactttgccatcgaccccaacggctacgtcctgctccacccc
aacctccagcctaagaaccccaagttccaggaaccggtgacgttggacttcctggacgct
gagctcgaggacgaggtcaaagttgagatcaggcagaagatgattgacggcgagacgggc
gaccacatgatcagcacactggtgaagtcccaggatgagcggtacatcgaccgaggcctg
agatcgtacacgtacgcgccggtcaaaggcagcgactacagccttgccctggtgctcccg
gggtacagtatgcattacatccgcgcggacatcggcgacaccatcacccaggccaaatca
aatttggggaaaaatgtcactgaaagtcttctggcctttgaagagcatggccacacattc
atagcaccgagagactactgcaaggacctgaagcccctgaagaacaacacagcgttcctg
aaggagtttctggactacatcgacaggaagactcccaacaaccccatgtgtaacgtggag
ctggtgaaccggctgctgctggacgccggcatcactcacggcctgtcccagatctggaag
gagcgagagctgcaacatggcgtcttggccagatttgttgccaccgacggcgggatcacc
cgagtctaccccaaaagcgccggtcaatattggacagagaatgcggagacgtatgaatcc
agtttttacaagaggaacctggacaatgatctgtacatcttcactccaaccccctggagc
cctaccgccgcttacgagaacgggactgaggaggccatcctggtcagccgagctgttgac
ctcaccatcgatgacatcacactgaaaccagcagtggtcggggtcaagctggacatcggc
gtctggatgaccagcttcatcaacaccactcagaggcccaactgcaaagatgagatctgt
ggctgtcagcgtaatgacgagtacgtggactgtgtcattctggacgacgggggtttcctg
gtgatgtccaaccaggacaactacatggatcagatcgggcggttcttcggggtcatggac
cccactctgatgctggacctggtcaactcgtcgctctacaccttcaacaagaccttcgac
taccagagtctctgtgaccccgagaaggagacacggggagccggcccccgatcagtctac
gtgcccaccatcgcagacatgttgaacatcggctggtgggccacagctgcgacctggtcc
atcatgcagcagatgttggtcagcctcaccttcccaaacttcatggaagcagccgatgtg
gaggaggacctgtcggactccatgtccaaggagggctgcatcacgcagcagacccagtac
ttcttcgagtccagcgagctgtccttcaaggggacggtgggctgcgacaactgctcccgg
atctaccacgcggagaagctgcccaggaccaacctggtgttcatcatcgctgacgcccga
cacacctgcgtgcagtgtgagggcagcccgctggtccaagacgagcagccctccactggt
ccgaacccgtgtttcctggccaggaacccgcgctacaggaaggggcccaccaactgcttc
gacgacaacaccaaggagcaggactttggctgcgggggggcggcggccctgagcccctcc
ctgtggactctggtgggggtccagatgctcctgctgtggacgatgtccggtaaccggagc
cccgcccacgtcccctcgtga
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