Gadus morhua (Atlantic cod): 115533262
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Entry
115533262 CDS
T10832
Symbol
cxcr4
Name
(RefSeq) C-X-C chemokine receptor type 4
KO
K04189
C-X-C chemokine receptor type 4
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03250
Viral life cycle - HIV-1
gmh03260
Virion - Human immunodeficiency virus
gmh04020
Calcium signaling pathway
gmh04060
Cytokine-cytokine receptor interaction
gmh04144
Endocytosis
gmh04672
Intestinal immune network for IgA production
gmh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115533262 (cxcr4)
03260 Virion - Human immunodeficiency virus
115533262 (cxcr4)
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
115533262 (cxcr4)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115533262 (cxcr4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115533262 (cxcr4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
115533262 (cxcr4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115533262 (cxcr4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
gmh04030
]
115533262 (cxcr4)
04050 Cytokine receptors [BR:
gmh04050
]
115533262 (cxcr4)
04090 CD molecules [BR:
gmh04090
]
115533262 (cxcr4)
G protein-coupled receptors [BR:
gmh04030
]
Rhodopsin family
Chemokine
CXC Chemokine
115533262 (cxcr4)
Cytokine receptors [BR:
gmh04050
]
Chemokine receptors
CXC Chemokine
115533262 (cxcr4)
CD molecules [BR:
gmh04090
]
Proteins
115533262 (cxcr4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
115533262
NCBI-ProteinID:
XP_030199540
Ensembl:
ENSGMOG00000033052
LinkDB
All DBs
Position
20:5659623..5661809
Genome browser
AA seq
375 aa
AA seq
DB search
MDYYDEHFVLNNTSEESGDSDFEMDGFMSPCVRELSNDLHRIFIPIVYGIIFFLGVVGNG
LVVLVMGYQKKIKTMTDKYRLHLSVADLLLVLTLPFWAVDAASTWYFGKFLCVSVHVIYT
LNVYSSVLILAFISLDRYLAVVRATNSQAMRKLLADKVIYVGVWLPALLLTVPDLVFAQV
RESVDSGMRFNNGADPREAMDSRLICERIYPQGSGIIWMAVFRFQHILVGFVLPGLVIFT
CYCIIIMKLSQGSKGQVLKRKALKTTVILILCFFCCWLPYCLGIFVDTLIQLEVLSSGCT
LDHWVQNWMSITEALAYFHCCLNPILYAFLGVKFKKSAKNALKNGSKSSQKNLMTKKRGP
ISSVSESESSSVLSS
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggattattacgatgagcattttgtgttgaataacacctcggaagagtcgggggactcg
gactttgaaatggacggctttatgtcgccgtgtgtcagggagctcagcaacgacctccac
cgaatattcatccccatcgtatatgggattatattcttcctgggggtcgttggcaacgga
ctggtcgtgctcgtcatgggctaccaaaaaaagataaaaacgatgacggacaaataccgt
cttcacctctccgtggccgatctgctgctggtcctcacgctgcccttctgggccgtggac
gcggccagcacctggtacttcggcaagttcctctgcgtctccgtccacgtgatctacacc
ctcaacgtgtacagcagcgtgctgatcctggccttcatcagcctggacaggtacctggcc
gtggtgcgcgccaccaacagccaggccatgagaaaactgctggccgacaaggtgatctac
gtgggggtctggctcccggccctactgctcaccgtgcccgacctggtgttcgcccaggtg
cgggagagcgtagacagcggcatgcggttcaacaacggagcagaccccagggaggcgatg
gactccaggctgatctgcgagcgcatttatccccaggggtccggcatcatctggatggcc
gtgttccgctttcagcacatcctggtgggctttgtgctgccgggtctggtcatcttcacc
tgctactgcattatcatcatgaagttgtcccagggatccaaggggcaggtgctgaagagg
aaagccctgaagaccaccgtcatcctgatcctgtgcttcttctgctgctggctgccctac
tgcttgggtatcttcgtggacaccctgatccagctggaagtgctgtcctccggctgtacg
ctggaccactgggtgcagaattggatgtccatcacagaggcactggcctacttccactgc
tgcctgaaccccatcctgtacgccttcctgggggtgaagttcaagaagtctgcgaagaac
gcactgaaaaacggcagtaagtccagtcagaagaacctcatgactaagaagaggggaccc
atctcttcggtgtccgagtcggagtcttcgagtgttctgtccagttaa
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