KEGG   Gadus morhua (Atlantic cod): 115533262
Entry
115533262         CDS       T10832                                 
Symbol
cxcr4
Name
(RefSeq) C-X-C chemokine receptor type 4
  KO
K04189  C-X-C chemokine receptor type 4
Organism
gmh  Gadus morhua (Atlantic cod)
Pathway
gmh03250  Viral life cycle - HIV-1
gmh03260  Virion - Human immunodeficiency virus
gmh04020  Calcium signaling pathway
gmh04060  Cytokine-cytokine receptor interaction
gmh04144  Endocytosis
gmh04672  Intestinal immune network for IgA production
gmh04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:gmh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115533262 (cxcr4)
   03260 Virion - Human immunodeficiency virus
    115533262 (cxcr4)
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    115533262 (cxcr4)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    115533262 (cxcr4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115533262 (cxcr4)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    115533262 (cxcr4)
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    115533262 (cxcr4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:gmh04030]
    115533262 (cxcr4)
   04050 Cytokine receptors [BR:gmh04050]
    115533262 (cxcr4)
   04090 CD molecules [BR:gmh04090]
    115533262 (cxcr4)
G protein-coupled receptors [BR:gmh04030]
 Rhodopsin family
  Chemokine
   CXC Chemokine
    115533262 (cxcr4)
Cytokine receptors [BR:gmh04050]
 Chemokine receptors
  CXC Chemokine
   115533262 (cxcr4)
CD molecules [BR:gmh04090]
 Proteins
  115533262 (cxcr4)
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx
Other DBs
NCBI-GeneID: 115533262
NCBI-ProteinID: XP_030199540
Ensembl: ENSGMOG00000033052
LinkDB
Position
20:5659623..5661809
AA seq 375 aa
MDYYDEHFVLNNTSEESGDSDFEMDGFMSPCVRELSNDLHRIFIPIVYGIIFFLGVVGNG
LVVLVMGYQKKIKTMTDKYRLHLSVADLLLVLTLPFWAVDAASTWYFGKFLCVSVHVIYT
LNVYSSVLILAFISLDRYLAVVRATNSQAMRKLLADKVIYVGVWLPALLLTVPDLVFAQV
RESVDSGMRFNNGADPREAMDSRLICERIYPQGSGIIWMAVFRFQHILVGFVLPGLVIFT
CYCIIIMKLSQGSKGQVLKRKALKTTVILILCFFCCWLPYCLGIFVDTLIQLEVLSSGCT
LDHWVQNWMSITEALAYFHCCLNPILYAFLGVKFKKSAKNALKNGSKSSQKNLMTKKRGP
ISSVSESESSSVLSS
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggattattacgatgagcattttgtgttgaataacacctcggaagagtcgggggactcg
gactttgaaatggacggctttatgtcgccgtgtgtcagggagctcagcaacgacctccac
cgaatattcatccccatcgtatatgggattatattcttcctgggggtcgttggcaacgga
ctggtcgtgctcgtcatgggctaccaaaaaaagataaaaacgatgacggacaaataccgt
cttcacctctccgtggccgatctgctgctggtcctcacgctgcccttctgggccgtggac
gcggccagcacctggtacttcggcaagttcctctgcgtctccgtccacgtgatctacacc
ctcaacgtgtacagcagcgtgctgatcctggccttcatcagcctggacaggtacctggcc
gtggtgcgcgccaccaacagccaggccatgagaaaactgctggccgacaaggtgatctac
gtgggggtctggctcccggccctactgctcaccgtgcccgacctggtgttcgcccaggtg
cgggagagcgtagacagcggcatgcggttcaacaacggagcagaccccagggaggcgatg
gactccaggctgatctgcgagcgcatttatccccaggggtccggcatcatctggatggcc
gtgttccgctttcagcacatcctggtgggctttgtgctgccgggtctggtcatcttcacc
tgctactgcattatcatcatgaagttgtcccagggatccaaggggcaggtgctgaagagg
aaagccctgaagaccaccgtcatcctgatcctgtgcttcttctgctgctggctgccctac
tgcttgggtatcttcgtggacaccctgatccagctggaagtgctgtcctccggctgtacg
ctggaccactgggtgcagaattggatgtccatcacagaggcactggcctacttccactgc
tgcctgaaccccatcctgtacgccttcctgggggtgaagttcaagaagtctgcgaagaac
gcactgaaaaacggcagtaagtccagtcagaagaacctcatgactaagaagaggggaccc
atctcttcggtgtccgagtcggagtcttcgagtgttctgtccagttaa

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