Gadus morhua (Atlantic cod): 115534170 Help Entry 115534170         CDS       T10832                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism gmh  Gadus morhua (Atlantic cod) Pathway gmh04115   p53 signaling pathway gmh04145   Phagosome gmh04148   Efferocytosis gmh04350   TGF-beta signaling pathway gmh04510   Focal adhesion gmh04512   ECM-receptor interaction gmh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gmh00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     115534170   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115534170  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     115534170    04148 Efferocytosis     115534170   09143 Cell growth and death    04115 p53 signaling pathway     115534170   09144 Cellular community - eukaryotes    04510 Focal adhesion     115534170   09142 Cell motility    04820 Cytoskeleton in muscle cells     115534170  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gmh04131]     115534170   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gmh00536]     115534170 Membrane trafficking [BR:gmh04131]  Endocytosis   Phagocytosis    Opsonins     115534170 Glycosaminoglycan binding proteins [BR:gmh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115534170 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS Laminin_G_3 EGF cEGF TSP1_CCN Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  115534170 NCBI-ProteinID:  XP_030200776 Ensembl:  ENSGMOG00000014699 LinkDB All DBs Position 21:complement(15794095..15807704) Genome browser AA seq 1175 aa AA seqDB search MKLTGGLCLLLMLWSCEGARVAESRDDNSVFDLFELVKVPKKNHGVSLVKGDDPYSPAYK IHNPNLIPALPDNYLRSIIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGPVFEIV SNGKANTLDIVFSTENKQQVVSIEDVDLATNRWKNITLFVQEDRVQLYVGCEEVNTAELD ASIQTILTHDTPAVAQLRLGKGAVKDTFMGVLQNVRFVFGTTIDAILRNKGCQNSLPTDT MILENYNGSSAIRTEYTGHKTKDLQMLCGFSCEDLASMFKELRSLGVVVKELPNELRQLT VENKDIRNRIDIHSGVCIHNGIVHKNSEEWTVDDCTECKCQDSAIVCKKISCPLVPCSTA TVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGVQQRGRSCDRINNHCEGTSVQT RDCYLEECDKRFKQDGSWSHWSPWSSCSGTCGGGVITRIRLCNSPNPQLGGKDCEGEGRQ TESCQQTPCPINGNWGTWSPWDTCSLTCGVGSQARKRLCNDPMPKHGGKECIGDAKDTQQ CNKKACPIDGCLSNPCFAGVKCTSLLEGGALNGSWKCGKCPTGYSGNGIKCKDIDECKEV PDTCFEFNGVHRCENTDPGYNCLPCPPRYSGTQPFGKGVAEATAKKQVCTPRNPCLDGSH DCNKNARCNYLGQFADPMFRCDCKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKK DNCPNLPNSGQEDYDKDGTGDACDSDDDNDSIPDDRDNCPFVYNPRQYDYDRDDVGDRCD NCPYNSNPDQTDTDGNGEGDACAVDIDGDGILNEKDNCPSVYNVDQRDTDLDGVGDMCDN CPLEHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACD HDDDNDGIPDDKDNCRLAANPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISAT DFRKFQMVPLDPKGTSQIDPHWVVRHQGKELVQTVNCDPGIAVGYDEFNAVDFSGTFFIN TERDDDYAGFVFGYQSSSRFYVVMWKQITQTYWSSKPTKAQGYSGLSIKVVNSTTGPGEH LRNALWHTGNTAGQVKTLWHDSKNIGWKDFTAYRWHLIHRPRTGNIRVVMYEGKKIMADS GSIYDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3528 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacaggagggctctgtctgctcctgatgctctggagctgcgagggcgccagg gtggcagagagccgagacgacaacagtgtgttcgacctgtttgagctggtcaaagtccca aagaagaaccacggggtctccctagtgaagggagacgacccctacagtcctgcctacaag atccacaaccccaacctcatccccgcgctccctgacaactacctgaggagcatcatcgac tccatccacgccgagagaggcttcctcctcctgctcaacttcaagcagttcaagcggacc cgcgggagcctgctaaccgtggagaagcgcgacggctctgggcccgtgttcgagatcgtg tccaacgggaaggccaacacgctggacatcgtgttctccaccgagaacaagcaacaggtg gtgtccatcgaggacgtggacctggccaccaaccgctggaagaacatcacgctgttcgtg caggaggaccgggtccagctgtacgtggggtgcgaggaggtgaacacggcggagttggac gcgtccatccagaccatcctgacgcacgatacacctgccgtggcgcagctgcggctcggc aaaggagcggtgaaggacacgttcatgggagtgctgcaaaacgtgcgctttgtgttcgga accaccatagacgcaatcctgcgcaacaagggatgccaaaactccctgccaaccgacacc atgatcctggagaattacaacggctcctccgccatccggactgaatacacaggccataag acgaaagacctgcagatgctgtgtggtttctcctgcgaggacctggccagtatgttcaag gagctgaggagtctgggggttgtggtcaaagagcttcccaatgaactacgacagctgacg gttgagaacaaggacattaggaaccgcatcgacatccacagcggcgtgtgcatccacaac ggcatcgtgcacaagaacagcgaggagtggaccgtggatgactgcaccgagtgcaagtgc caggactctgcaatagtctgcaaaaagatctcctgcccgctcgtcccctgttccaccgcc acggtgcctgatggagagtgctgtccacgctgtggaacaccgagcgactacgctgaggac ggctggtccccctggtccgagtggacccactgctcggtgtcgtgcgggcgaggcgtccaa cagcgcggccgctcctgcgaccgcatcaacaaccactgcgagggcacctccgtgcagacc cgcgactgctaccttgaggagtgcgacaagcgcttcaagcaggacggcagttggagccac tggtctccgtggtcgtcctgctccgggacctgcgggggcggcgtgatcacccgcatccgc ctctgcaactcccccaacccccagctgggcggcaaggactgtgagggcgagggccgtcaa acagagagctgccagcaaacgccctgtcccatcaatggaaactgggggacgtggtctcca tgggatacctgctctctcacctgcggagttggttcccaggcccgtaaacgtctctgcaat gaccccatgccaaagcacggtggcaaggaatgcattggcgatgccaaggacacacagcag tgcaacaaaaaagcctgtccaatcgatgggtgcctttccaatccctgcttcgctggagtc aagtgcaccagcctcctggaaggaggagcactgaatggctcctggaagtgtggaaaatgt cccacaggctacagcggtaacggcattaagtgcaaggacattgacgagtgcaaggaggtg cctgacacgtgctttgagttcaacggagtgcaccgctgcgagaacacagaccccggctac aactgtctgccctgcccaccgcgctactctgggacacagcctttcggcaaaggcgtggca gaggcaacagccaaaaaacaggtgtgcacaccccgtaacccctgtctcgacggaagtcac gactgcaacaagaacgcccgctgtaactacctgggacagttcgccgaccccatgttccgc tgcgactgcaagcccggatatgcaggcaatggccatatttgcggcgaggacacagatctg gatggatggcccaatgctgacctggtgtgtgtggaaaacgccacctatcactgcaaaaag gacaattgccccaacctacccaactctgggcaagaagactacgacaaggatgggactgga gatgcttgtgacagcgatgatgacaatgatagcattccggatgatagggacaattgtccg ttcgtgtacaacccccggcagtacgactatgaccgcgatgacgtgggagaccgctgtgac aactgcccctacaacagcaacccggaccagacggacaccgacggcaacggggagggagac gcctgcgccgtggacatcgatggggacggcattctgaacgagaaggacaactgtccctcc gtgtacaacgtggaccagagagacactgacctagatggagtgggagatatgtgtgataac tgccctctggaacataatcctgatcaggtggattccgacgacgaccgcgtgggcgacaag tgtgacagtaaccaggacatcgatgaggacggacaccagaacaacctggacaactgcccc tacatccccaatgccaaccaggcggaccacgacaaggacggcaagggagatgcctgtgac catgatgacgacaatgacggtatcccagacgataaggacaactgcagactggccgctaac cccgatcagctggattctgatggtgatggccgtggggatgcttgcaaagacgactttgac caagacaacgtgcccgacatctatgacgtatgtccagaaaactttgacatcagtgcgaca gacttcagaaagttccagatggttcccttggaccccaaaggcacctctcagattgacccc cactgggtggttcgccatcagggcaaagagctggtccagactgtcaattgtgaccctggc attgctgtgggttatgatgagttcaacgcggtggatttcagcggtacgttcttcatcaac acggagagggacgacgactatgctggctttgtgtttggctaccagtcaagctccaggttc tacgtggtgatgtggaagcagatcacgcagacctactggtccagtaaacccaccaaggcc cagggctactccggattgtccatcaaggtggtcaactcaaccacaggaccaggagagcac ctgaggaacgccctctggcacacaggcaacaccgctggacaggtgaaaactctctggcac gactcgaagaacattggctggaaagacttcactgcctacaggtggcatctgatccatagg cccagaacaggaaacattagagtggttatgtatgaaggtaaaaagatcatggcagactct ggcagcatctatgacaagacctatgccggtggaaggcttggtctctttgtcttctcacag gagatggtttacttctcggacctcaagtatgaatgcagagatgcgtaa

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