Gadus morhua (Atlantic cod): 115534170 Help Entry 115534170         CDS       T10832                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism gmh  Gadus morhua (Atlantic cod) Pathway gmh04115   p53 signaling pathway gmh04145   Phagosome gmh04148   Efferocytosis gmh04350   TGF-beta signaling pathway gmh04510   Focal adhesion gmh04512   ECM-receptor interaction gmh04518   Integrin signaling gmh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gmh00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     115534170   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115534170    04518 Integrin signaling     115534170  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     115534170    04148 Efferocytosis     115534170   09143 Cell growth and death    04115 p53 signaling pathway     115534170   09144 Cellular community - eukaryotes    04510 Focal adhesion     115534170   09142 Cell motility    04820 Cytoskeleton in muscle cells     115534170  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gmh04131]     115534170   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gmh00536]     115534170 Membrane trafficking [BR:gmh04131]  Endocytosis   Phagocytosis    Opsonins     115534170 Glycosaminoglycan binding proteins [BR:gmh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115534170 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS Laminin_G_3 EGF cEGF TSP1_CCN Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  115534170 NCBI-ProteinID:  XP_030200776 Ensembl:  ENSGMOG00000014699 LinkDB All DBs Position 21:complement(15794095..15807704) Genome browser AA seq 1175 aa AA seqDB search MKLTGGLCLLLMLWSCEGARVAESRDDNSVFDLFELVKVPKKNHGVSLVKGDDPYSPAYK IHNPNLIPALPDNYLRSIIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGPVFEIV SNGKANTLDIVFSTENKQQVVSIEDVDLATNRWKNITLFVQEDRVQLYVGCEEVNTAELD ASIQTILTHDTPAVAQLRLGKGAVKDTFMGVLQNVRFVFGTTIDAILRNKGCQNSLPTDT MILENYNGSSAIRTEYTGHKTKDLQMLCGFSCEDLASMFKELRSLGVVVKELPNELRQLT VENKDIRNRIDIHSGVCIHNGIVHKNSEEWTVDDCTECKCQDSAIVCKKISCPLVPCSTA TVPDGECCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGVQQRGRSCDRINNHCEGTSVQT RDCYLEECDKRFKQDGSWSHWSPWSSCSGTCGGGVITRIRLCNSPNPQLGGKDCEGEGRQ TESCQQTPCPINGNWGTWSPWDTCSLTCGVGSQARKRLCNDPMPKHGGKECIGDAKDTQQ CNKKACPIDGCLSNPCFAGVKCTSLLEGGALNGSWKCGKCPTGYSGNGIKCKDIDECKEV PDTCFEFNGVHRCENTDPGYNCLPCPPRYSGTQPFGKGVAEATAKKQVCTPRNPCLDGSH DCNKNARCNYLGQFADPMFRCDCKPGYAGNGHICGEDTDLDGWPNADLVCVENATYHCKK DNCPNLPNSGQEDYDKDGTGDACDSDDDNDSIPDDRDNCPFVYNPRQYDYDRDDVGDRCD NCPYNSNPDQTDTDGNGEGDACAVDIDGDGILNEKDNCPSVYNVDQRDTDLDGVGDMCDN CPLEHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACD HDDDNDGIPDDKDNCRLAANPDQLDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISAT DFRKFQMVPLDPKGTSQIDPHWVVRHQGKELVQTVNCDPGIAVGYDEFNAVDFSGTFFIN TERDDDYAGFVFGYQSSSRFYVVMWKQITQTYWSSKPTKAQGYSGLSIKVVNSTTGPGEH LRNALWHTGNTAGQVKTLWHDSKNIGWKDFTAYRWHLIHRPRTGNIRVVMYEGKKIMADS GSIYDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3528 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacaggagggctctgtctgctcctgatgctctggagctgcgagggcgccagg gtggcagagagccgagacgacaacagtgtgttcgacctgtttgagctggtcaaagtccca aagaagaaccacggggtctccctagtgaagggagacgacccctacagtcctgcctacaag atccacaaccccaacctcatccccgcgctccctgacaactacctgaggagcatcatcgac tccatccacgccgagagaggcttcctcctcctgctcaacttcaagcagttcaagcggacc cgcgggagcctgctaaccgtggagaagcgcgacggctctgggcccgtgttcgagatcgtg tccaacgggaaggccaacacgctggacatcgtgttctccaccgagaacaagcaacaggtg gtgtccatcgaggacgtggacctggccaccaaccgctggaagaacatcacgctgttcgtg caggaggaccgggtccagctgtacgtggggtgcgaggaggtgaacacggcggagttggac gcgtccatccagaccatcctgacgcacgatacacctgccgtggcgcagctgcggctcggc aaaggagcggtgaaggacacgttcatgggagtgctgcaaaacgtgcgctttgtgttcgga accaccatagacgcaatcctgcgcaacaagggatgccaaaactccctgccaaccgacacc atgatcctggagaattacaacggctcctccgccatccggactgaatacacaggccataag acgaaagacctgcagatgctgtgtggtttctcctgcgaggacctggccagtatgttcaag gagctgaggagtctgggggttgtggtcaaagagcttcccaatgaactacgacagctgacg gttgagaacaaggacattaggaaccgcatcgacatccacagcggcgtgtgcatccacaac ggcatcgtgcacaagaacagcgaggagtggaccgtggatgactgcaccgagtgcaagtgc caggactctgcaatagtctgcaaaaagatctcctgcccgctcgtcccctgttccaccgcc acggtgcctgatggagagtgctgtccacgctgtggaacaccgagcgactacgctgaggac ggctggtccccctggtccgagtggacccactgctcggtgtcgtgcgggcgaggcgtccaa cagcgcggccgctcctgcgaccgcatcaacaaccactgcgagggcacctccgtgcagacc cgcgactgctaccttgaggagtgcgacaagcgcttcaagcaggacggcagttggagccac tggtctccgtggtcgtcctgctccgggacctgcgggggcggcgtgatcacccgcatccgc ctctgcaactcccccaacccccagctgggcggcaaggactgtgagggcgagggccgtcaa acagagagctgccagcaaacgccctgtcccatcaatggaaactgggggacgtggtctcca tgggatacctgctctctcacctgcggagttggttcccaggcccgtaaacgtctctgcaat gaccccatgccaaagcacggtggcaaggaatgcattggcgatgccaaggacacacagcag tgcaacaaaaaagcctgtccaatcgatgggtgcctttccaatccctgcttcgctggagtc aagtgcaccagcctcctggaaggaggagcactgaatggctcctggaagtgtggaaaatgt cccacaggctacagcggtaacggcattaagtgcaaggacattgacgagtgcaaggaggtg cctgacacgtgctttgagttcaacggagtgcaccgctgcgagaacacagaccccggctac aactgtctgccctgcccaccgcgctactctgggacacagcctttcggcaaaggcgtggca gaggcaacagccaaaaaacaggtgtgcacaccccgtaacccctgtctcgacggaagtcac gactgcaacaagaacgcccgctgtaactacctgggacagttcgccgaccccatgttccgc tgcgactgcaagcccggatatgcaggcaatggccatatttgcggcgaggacacagatctg gatggatggcccaatgctgacctggtgtgtgtggaaaacgccacctatcactgcaaaaag gacaattgccccaacctacccaactctgggcaagaagactacgacaaggatgggactgga gatgcttgtgacagcgatgatgacaatgatagcattccggatgatagggacaattgtccg ttcgtgtacaacccccggcagtacgactatgaccgcgatgacgtgggagaccgctgtgac aactgcccctacaacagcaacccggaccagacggacaccgacggcaacggggagggagac gcctgcgccgtggacatcgatggggacggcattctgaacgagaaggacaactgtccctcc gtgtacaacgtggaccagagagacactgacctagatggagtgggagatatgtgtgataac tgccctctggaacataatcctgatcaggtggattccgacgacgaccgcgtgggcgacaag tgtgacagtaaccaggacatcgatgaggacggacaccagaacaacctggacaactgcccc tacatccccaatgccaaccaggcggaccacgacaaggacggcaagggagatgcctgtgac catgatgacgacaatgacggtatcccagacgataaggacaactgcagactggccgctaac cccgatcagctggattctgatggtgatggccgtggggatgcttgcaaagacgactttgac caagacaacgtgcccgacatctatgacgtatgtccagaaaactttgacatcagtgcgaca gacttcagaaagttccagatggttcccttggaccccaaaggcacctctcagattgacccc cactgggtggttcgccatcagggcaaagagctggtccagactgtcaattgtgaccctggc attgctgtgggttatgatgagttcaacgcggtggatttcagcggtacgttcttcatcaac acggagagggacgacgactatgctggctttgtgtttggctaccagtcaagctccaggttc tacgtggtgatgtggaagcagatcacgcagacctactggtccagtaaacccaccaaggcc cagggctactccggattgtccatcaaggtggtcaactcaaccacaggaccaggagagcac ctgaggaacgccctctggcacacaggcaacaccgctggacaggtgaaaactctctggcac gactcgaagaacattggctggaaagacttcactgcctacaggtggcatctgatccatagg cccagaacaggaaacattagagtggttatgtatgaaggtaaaaagatcatggcagactct ggcagcatctatgacaagacctatgccggtggaaggcttggtctctttgtcttctcacag gagatggtttacttctcggacctcaagtatgaatgcagagatgcgtaa

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