Gadus morhua (Atlantic cod): 115534879
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Entry
115534879 CDS
T10832
Name
(RefSeq) uncharacterized protein LOC115534879
KO
K10324
ankyrin repeat and SOCS box protein 2
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115534879
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
115534879
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
SOCS_box
Nitro_FeMo-Co
Motif
Other DBs
NCBI-GeneID:
115534879
NCBI-ProteinID:
XP_030202021
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All DBs
Position
21:complement(16855582..16869343)
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AA seq
1287 aa
AA seq
DB search
MEFEDYTAYNNLSDEELLQLAIERSLTEQFLEGRYIHPPPDAPRTPCPSPSLRPSFKHDL
FTEMQLMIRDQDEGALLAFVKENSGSSTATNTDGWTALHEAAYFGVLGCVMILIERFPDM
VNRCSPINQTALLLAAYRGHVSCVEYLLEHGADPNICNKEREGPLFRACENKSLRMVELL
LRCGASVNKTDNQGATPFHEAVRTDQLEVCEILFQAGAKISTFNIYGNRPFFTAAQGGCS
NVLGFLLAKGADINKQARDGATPLYEACKNDHLCTVEILLSHKADVNLPTKSGLLPIHQA
TQRANKQMVSMLLPLTSKKMVSSSGISPLHLAAEDGLDDILELLIRDGYDVNSQLSREHR
LMYEDHRSTALYFSVCDDNLEAATILLEAGADPNLDFFNPLLIAVQKGNAELVELLLMYG
ADVHASLSTHKLGFPSAVLLAMNSINVLKLLLDHGCDVHPCFDCDYGSKAHPYFAPLWEA
HELQYRRESPTEHSVDFCEAISKYSIKEPGPLISLLLDYVGHIKLCSRLLEILDGCNDRK
HIKSKAVPPHPLMQLCRLRIRKILGAKRLKTVNVLPLPNILLRFLWYDVECISYRGSNMA
LVSASVSQASNSGLALEDYSIYNQLSDDELLALAIERSLTNSPSLSGNQNQPGNQSSASR
GETSGGLSSLRTGQPNGPNRANPPQNQPPEGAAAQYSSHNPPADKLFNPKNFSGTVSHFI
TGQGKRMVAYRKHDGALVHVCPEPEEEDGPLFAAIKKGDVRQVRALVGQEHSQMSSKPGW
MAIHEAARHGQEACLNVLLTGKGQGMINMRTAQDQTALLLAVSYTHAACARLLLERGADT
ELMNKDRETPLYKACEEDNAEIVAMLLNHGASVNVHCNQGWTPLQEAVCRNNVEICEMLV
QAGARLTPANVYGISPLFTAAQSGQVATLRFLIKQGADVDSQATDGATALYEATKNGHAK
IVELLLSQKADANKASKRGLLPLHIAAQNGDDILVPMLIPATTKARIRRAGISPLHVAAE
YNMDDVLELLIQADFDVNAQLSHEHSKLYEDHRTTALYFSVANNNVDAVRMLLEAGADPN
LDLFNPLLVAVRGGCMETVTLLVEHGADVNAYLATHPTTFPATVLFAMKYLSMLKYILDS
GCDALACFRCVHGSSPHPPMKLNHFERDEMRYTELNMTELTARHCVQFCEMVSIPSMCRW
AGPIIDVLLDYVGRVKLCSRLQEHLDSYPDWHPIKVRATTTPPLMQMCRLRIRQVVGVQR
LRRLKTLPLPGSLLRFLVYKEASIDFE
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgaagactacactgcctacaataacctgtctgatgaggagctcttacagcta
gccatcgaaagaagtctaactgagcaattccttgagggccgttacattcatccccctcct
gatgcgccaaggacaccgtgtccaagtccaagtctacgcccctcttttaaacatgacctc
ttcactgagatgcagttaatgatccgcgaccaggatgaaggagctttgttggcttttgta
aaggaaaactcaggcagctcgacggccaccaatactgacggctggaccgctctccatgaa
gccgcttactttggcgtgctgggatgcgtcatgatcctgatagaaaggtttcctgacatg
gtgaacagatgtagccccataaaccagaccgcccttctcctggctgcataccgaggacat
gtctcctgtgttgagtatctcctggagcatggcgccgaccccaacatctgcaacaaggaa
cgagagggtccgctgttcagagcatgtgaaaataaaagcctgcgcatggtggagctcctt
ctgaggtgtggagcgtcagtgaacaagaccgacaaccagggagcaacgcccttccatgaa
gccgtcagaaccgaccagctggaggtctgtgagatcttgttccaggccggagctaagatc
tctaccttcaatatctacgggaatcggccgttcttcaccgccgcacagggtggatgttcc
aatgtcttgggcttcctactggctaaaggtgcggatattaataaacaggctagagatgga
gcgactcctctgtacgaagcatgcaagaacgaccacctctgcacggtggagattcttctg
tcacataaggcagacgtaaacctgcccacaaagtctggcctcctacccatccaccaagcc
acgcagagggcaaacaaacagatggtctccatgctgcttcctctgaccagcaagaagatg
gtgagcagcagcggtatcagcccgctgcacctcgccgccgaggatggcctggatgacatc
ctggagctgctgatccgagacggctacgacgtcaacagccagctgtccagggagcaccgg
ctgatgtacgaggaccaccgcagcacggcgctgtacttttccgtctgcgacgacaacctg
gaggccgccaccattctcctggaggccggtgccgaccccaacctggacttcttcaaccct
ctcctgattgccgtccagaagggaaacgctgaattagtggagctgctgttgatgtacgga
gcagacgtccacgccagcctctccacacataaactgggcttcccgtcggccgtgctgctg
gccatgaatagcatcaacgtgctgaagctcctgttggaccacggctgcgacgtccacccc
tgctttgactgtgactatggcagcaaggcccatccatacttcgccccgctgtgggaggca
cacgaactgcaatacaggagagagtctccaactgaacactctgtcgatttttgtgaagcc
atctctaagtattccattaaggagcccggtccgctcatctccctgctcctggattatgtt
ggccacatcaaactgtgctcccggttgctggagatcctagacggctgcaacgacaggaag
cacatcaaaagcaaggcagtaccaccgcatcccctgatgcagctgtgcagactgagaatc
cggaagattctgggagccaaacgacttaaaacagtcaatgttctaccgctgccaaatata
ctactgcgttttctctggtacgacgtggagtgcatttcatatcgaggatccaacatggcg
ttggtcagtgcctcagtctcccaggccagcaactccggcctggccttggaggactactcc
atctacaatcagctgtccgatgacgaactccttgcgctcgccatcgaacgcagtctaacc
aacagccccagtctatccggcaaccagaatcaacctggcaaccagagttcggcttcaagg
ggagaaacaagtggaggtctttcaagtcttcgaactggtcagcctaacggaccgaaccgt
gcaaaccctccccaaaaccagccacctgagggcgctgccgcgcagtacagttcccacaat
cccccagcggacaaattattcaatccgaagaacttttctggcacggtgagccacttcatc
acaggccaaggcaagcgcatggttgcgtaccgcaagcacgacggggcactggtccacgtc
tgccccgagccagaggaggaggatgggcctctgttcgcagccatcaagaaaggagatgta
cgccaggtgagggcgctagtgggccaggaacacagccagatgtccagtaaacccggctgg
atggccattcacgaggctgcccgccacggacaggaggcctgcctcaacgtactgctgaca
ggaaaaggacaagggatgatcaacatgcgaactgcgcaggaccagactgcgcttcttctg
gcagtcagctacacccatgcggcctgtgccaggctgctgctggagagaggagctgacacg
gaactcatgaataaagacagggagactcccctttacaaagcttgcgaggaagacaacgcg
gagatcgtggcgatgctcctgaaccacggggcgtcggtgaacgtccactgcaaccagggc
tggacgccgctgcaggaggccgtgtgtcgcaacaacgtggagatctgtgagatgctggtg
caggccggtgccaggctcaccccagccaacgtctacggcatctccccgctcttcaccgcg
gcccagagcgggcaggttgcaacgctccggtttcttattaaacaaggtgcggatgttgac
agccaggcaacagatggcgccaccgcgctgtacgaagcgaccaaaaatggacacgcgaag
atcgttgagctgctcctctcgcagaaggccgacgccaacaaggccagcaagagaggatta
ctgcctctgcacatcgctgcccagaatggggatgacatcctggtgcccatgctgatcccg
gccactaccaaggcgcgtatccggcgcgccggcatcagtcctctgcacgtggcggccgaa
tacaacatggacgacgtgctggagctcctgatccaggccgacttcgacgtcaacgcacag
ctgtcccacgagcactccaagctgtacgaggaccaccgcaccaccgcgctctacttctcc
gtggccaacaacaacgtggacgcggtgcggatgctgctggaggcgggcgccgaccccaac
ctggacctgttcaaccccctgctggtcgcggtgcgcggcggctgcatggagacggtcacc
ctgctggtggagcacggcgccgacgtcaacgcctacctggccacccaccccaccaccttc
ccggccaccgtgctcttcgccatgaagtacctctccatgctgaagtacatcctggacagc
ggctgtgacgcgctggcgtgtttccgctgcgtgcacggcagcagcccccacccccccatg
aagctcaaccactttgagcgggatgagatgagatacacggagctcaacatgactgaactt
acggctcgccactgtgttcagttctgcgagatggtgtccatcccaagcatgtgtcgctgg
gccggccccatcatagacgtcttgttggactacgtgggccgtgtgaagctgtgcagccgc
ctgcaggagcacctcgacagctatccagactggcatccaatcaaagtcagagccaccaca
actcctccactgatgcagatgtgcagactgaggatccggcaggttgttggagttcagcgc
ctgaggaggctgaagaccctgcctctccctgggtccctcctccgattcctggtgtacaag
gaggcaagcattgactttgaataa
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