Gadus morhua (Atlantic cod): 115535455
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Entry
115535455 CDS
T10832
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like isoform X1
KO
K06751
MHC class I antigen
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04144
Endocytosis
gmh04145
Phagosome
gmh04218
Cellular senescence
gmh04514
Cell adhesion molecules
gmh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115535455
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115535455
04145 Phagosome
115535455
09143 Cell growth and death
04218 Cellular senescence
115535455
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115535455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115535455
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmh00537
]
115535455
Exosome [BR:
gmh04147
]
Exosomal proteins
Proteins found in most exosomes
115535455
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gmh00537
]
Antigens
115535455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
Ig_2
ig
I-set
C2-set_3
DUF5849
Motif
Other DBs
NCBI-GeneID:
115535455
NCBI-ProteinID:
XP_030202556
LinkDB
All DBs
Position
22:complement(3191468..3210971)
Genome browser
AA seq
367 aa
AA seq
DB search
MKALIGLLLLIFGHGVSPVLHSLHYVYTASSGLSTFPEFVAVGMVDGVQMLHFDKQSKTV
LKQDWMEQLTRDDAEYLESSNGLSLRSQQTFKDDIGILKQRFNQTGGAHIFQKMYGCEWD
DDDDDSIDGYEQYGYDGEDFISLDLKTLTWVAAVPQAFPTKQRWNQEKGYNEQQKNYFNK
ECVDWLKKYLSYGKSTLQRTERPRVSLLQRSPSSPVVCHATGFYPDRVVVFWRRDGQELH
EQVDPGEVLPNHDGTFQVSVDLDLTAVPQEDWGRYECVVQLKGIEDISTPLDPALIRTNW
VYMSGLTIPIIIGFVVLLLVAAAVVGVLLYKKRNASDQRHKPVGSDSSSENTEGQNPAPE
AQPLTTG
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgctaatagggctgctgctgttgatctttggtcacggtgtgtccccagtgctt
cactctctgcattatgtctacacggcgtcgtctggactctcaaccttcccagagtttgtt
gctgttgggatggtggatggagttcagatgcttcactttgacaaacagtcaaaaacagtc
ctcaaacaggactggatggagcagctcaccagagatgacgccgaatacctggagagtagc
aatggactctctctgcgttcccaacagaccttcaaagacgacattgggattctgaagcag
cgctttaaccagacaggaggtgcccacatatttcagaagatgtatggttgtgagtgggat
gatgatgatgatgattctattgatggttatgagcagtatggttatgatggagaggacttc
atatcgttggacctgaagaccctgacctgggtcgctgcagtacctcaggctttccccacc
aaacagagatggaatcaggaaaaaggttataatgaacagcagaagaactacttcaacaag
gagtgtgttgattggctgaagaagtacctgtcctatgggaagagcacactgcagagaaca
gagcgtccgcgggtgtctctgctccagaggagcccctcctccccagtggtgtgccatgct
acaggcttctaccctgacagggtggtggtgttctggaggagagacggccaggagctccat
gagcaggtggaccccggggaggtcctccccaaccacgacgggaccttccaggtcagcgtg
gacctggacctcacggccgtcccacaggaggactgggggaggtacgagtgtgtggtccag
ctaaaaggcatcgaggacatctccacccccctggaccccgccctcatcaggaccaactgg
gtgtacatgagtggcctcaccatccccatcatcattgggttcgttgttctcctcctcgtt
gctgctgctgttgttggagtccttctgtacaagaagaggaacgcttcagaccagcgacac
aaaccagttggttctgacagcagctctgagaacactgaggggcagaatccggctcctgag
gcccaacctctgaccacaggttaa
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integrated database retrieval system
