Gadus morhua (Atlantic cod): 115535896
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Entry
115535896 CDS
T10832
Name
(RefSeq) exostosin-1c-like
KO
K02366
glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:
2.4.1.224
2.4.1.225
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
gmh01100
Metabolic pathways
Module
gmh_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
Enzymes [BR:
gmh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
115535896
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
115535896
Glycosyltransferases [BR:
gmh01003
]
Glycan extension
O-Glycan
115535896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
RXYLT1_C
Motif
Other DBs
NCBI-GeneID:
115535896
NCBI-ProteinID:
XP_030203314
LinkDB
All DBs
Position
22:complement(4156643..4167219)
Genome browser
AA seq
744 aa
AA seq
DB search
MKAKKRYLFLLSAGACLVLLFYFGGGVPLPKASRGGGHERGGREGKREGHQPWPHFSDPL
QGFVPSWDHTDTEEYNLHVSPRQKRDVTAGVFRGRGCRMDTCFDSSLCRKHGLRVYVYPL
VKGEKISESYQNILSTIEGSRFYTSDPAQACLFVLSLDTLDRDQLSPQYVHNLKAKVTSL
PLWNDGRNHLIFNLYSGTWPDYTEDLGFDIGQAMLAKASLNTEHFRPGFDVSIPLFSKDH
PQKGGERGWLVRNGVPPARKYLLMFKGKRYLTGIGSDTRNALHHIHNGKDIVSLTTCRHG
KDWEKHKDARCDHDNLEYERFDYQELLHNSTFCLVPRGRRLGSFRFLESLQAACIPVLLS
NGWELPFSDVIQWNQAVMEGDERLLLQVPSTVRAVGSDRVLALRQRTQMLWEAYFSSVDK
IVLTTLEIIKDRVFSHVSRNKYMWNSQPGGLLVLPEYSTHLAHFPFFFLSLGVSPGHEFT
AVIQAVSPLVSQSQPIMKLLQVVSRSKYCSQIIILWNSEKPPPPRSKWPPMPVPLTVTDG
HRKTTSRFLPHVSIETEAVLSLDEDTVLMTSEVNFAFLVWRSFPDRIVGYPPRSHFWDPL
KKAWGYTSKWTNEYSIVLTGAAFYHRYYHYLFTHYLPPSLRTLVDTTSNCEDILMNFLVS
SVTHLPPIKVAQRKQYKELPSPQGTKAGPWVNPEHFNQRQECVNAFASWFGYMPLVHSQF
RLDPVLFKDQVSVLRKKYKDLERA
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccaaaaagcgatacctgttcctgctgtcggccggcgcgtgcctggtgctcctc
ttctattttggagggggggtgccgctccccaaggcgagccgggggggcgggcacgagcgc
ggcggtcgcgagggcaagcgcgaggggcaccagccgtggccccacttctctgacccctta
cagggcttcgtgccctcgtgggaccacacggacacggaggaatacaacctccacgtgtcg
ccgcggcagaagcgggacgtcaccgcgggggtcttccgcggccgcggctgccgaatggac
acctgcttcgactcgtccctgtgccggaagcacggcctgcgcgtgtacgtgtacccgctg
gtcaagggcgagaagatctcggagagctaccagaacatcctgtccaccatcgagggctcg
cggttctacacgtcggacccggcccaggcctgcctgttcgtgctgagcctggacacgctg
gaccgcgaccagctgtccccgcagtacgtgcacaacctcaaggccaaggtgacgagcctg
ccgctgtggaacgacggccgcaaccacctcatcttcaacctgtactcgggcacctggcct
gactacacggaggacctgggcttcgacatcggccaggccatgctggccaaggccagcctg
aacacggagcacttccggcccgggttcgacgtgtccatcccgctcttctccaaggaccac
ccgcagaagggcggcgagcgtggctggctggtgcgcaacggcgtccccccggcgaggaag
tacctgctgatgttcaagggcaagcggtacctgacgggcatcggctcggacacgcgcaac
gcgctgcaccacatccacaacggcaaggacatcgtgtcgctgaccacgtgccgccacggc
aaggactgggagaagcacaaggacgcccgctgtgaccacgacaacctggagtacgagagg
tttgactaccaagagctcctccataactcgaccttctgcctggtgcccagaggtcgccgg
cttggctccttccgcttcctggagtccctccaggcggcctgtatcccggtgctgctcagt
aacggctgggagcttcccttctctgacgtcatccagtggaaccaggcggtgatggaggga
gatgaaaggctactgctgcaggtgccctccacggtgcgtgcggtgggcagcgaccgggtg
ctggccctaaggcagaggacccagatgttgtgggaggcgtacttctcctccgtggacaag
atcgtcctcaccaccctggagatcattaaggacagagtgttctcccacgtctcgaggaac
aagtacatgtggaactcccagccgggcggtctcctggtgctgcctgagtactccacccac
ctggcccacttccccttcttcttcctcagcctgggagtcagcccgggtcatgagttcact
gccgtcatccaggctgtctccccattggtcagccagtctcagccaatcatgaagctgctg
caggtggtctccaggtcaaagtactgctcccagatcatcatcctgtggaacagcgagaag
ccgccgccccctcgcagcaagtggccccccatgcccgtccccctcaccgtgacggacggc
cacaggaagacgacaagccggttcttacctcacgtttccatagagacagaggcggtgctg
agtttggacgaggatacggtcctgatgaccagtgaggtcaactttgctttcctggtgtgg
cggagcttccccgaccggatcgtggggtaccccccccggagccacttctgggacccccta
aagaaggcctgggggtacacctccaagtggaccaatgagtactccatcgtgctcaccggg
gccgccttctaccacaggtactaccactacctgttcacgcactacctgcccccctccctc
cgcacgctggttgacaccacctccaactgcgaggacatcctcatgaacttcctggtctcc
tcggtaacgcacctgccgccaatcaaggtggcccagaggaagcagtacaaagagctgccc
agcccccagggtactaaggccggcccctgggtcaaccccgagcactttaaccagcggcag
gagtgcgtcaacgcctttgccagctggtttggttacatgccgctggtccactcccagttc
cgcctggacccggttctcttcaaggaccaggtgtccgtcctccgcaagaagtacaaggac
ctggagagggcctga
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