Gadus morhua (Atlantic cod): 115536102
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Entry
115536102 CDS
T10832
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115536102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115536102
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
115536102
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-CGNR
NOA36
BUD22
Motif
Other DBs
NCBI-GeneID:
115536102
NCBI-ProteinID:
XP_030203620
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Position
22:526872..544668
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AA seq
884 aa
AA seq
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METDGEPSQQPAPPAGGALSGSAARPSPMNSMSLYERQAVQALQALQRQPNAAQYFQQLM
LQQQINNAQLHSLQQAGLAAGRQSSPSSSSSPLTTTSSSVPVSGGGAITSSRPIGQGPSA
TSTISQSVVLSGTAGRQGQMYLRVNRSLRAPISSQLIFMPGNTATVATVTQQPQAQQQPI
KEVMATSSFGIQSDNNQVQNLALRGPSDPKGPGVKTETFEKIDSVPHGGAQPLPQPPIKP
LPPPLPHIKIPSYPQPAHLKAHPPPSPSIPLSQLLLHGPRSVSTVTATATATHLLVPPPP
PHGYQATLKPGAGVLKPGTGAQTLVVQPLQKASLGPEKPLPIQSKGPQGVRPPLQLPSRT
PPPIRPAPAPPSSLATPPAAPPHIPVQIVGARQSSLGSSLAQARGGGPGARGGAGGPLLT
VVAAIASREGGVTACRGAGLKALQSPQEVAPLARVTHVHPQANQSGGRGQNGVLTPGSSS
SSQPVGASSSSSSALPPPSSSSQLRPSATLPQAPGDQRGALPGVTANGSAAGGHGTQGRQ
TTGSLKRKSESSSANGEEGPAPARLQPIRDLPSALSTAAVEAGPGLNPPAPSLPLSITRV
GVGQLEKAPPPQAVVKPQVLTHLIEGFVIQEGAEPFPVCGPVKEPAGEGLTSDFPDVNSQ
SDTVTTATVLKCEYCGSLAPARQFRGTRRFCSMSCAKRYNVSFRLKHSQGHGQGQGRHHH
PQGHHSDGEGVVARRRVPHRTSSEIASARIAGRALPAQCRSESSQSDDGSSIDEEEDDED
EDEEDEQDEPMSLSPANSPSCTQAPPPPPLPLDSPASPAHWSVEEVSQFISSLQGCEELS
SHFLSQEIDGQALLLLREEHLMSTMNIKLGPALKICAHINTLRD
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggagacggacggggagcccagccagcagcccgccccccccgctggaggcgcgctgtcc
gggtccgccgcgagaccctctcccatgaactccatgtcgctgtacgagagacaggccgta
caggcactgcaggccctgcagagacagcccaacgccgcccagtacttccagcagctgatg
ctgcagcagcagatcaacaacgcccagctccacagcctgcagcaggccggtctagctgct
ggtcgtcagtccagtccttccagtagctcctcccccctcaccaccacctcatccagtgtt
cccgtttcagggggcggggccatcaccagctcacgccctattggtcaaggcccgtcagcc
acgtcaaccatcagccaatcggtggtgctcagtgggacggccgggaggcagggccagatg
tacctgagggtaaaccggtcgctccgggcgcccatctcctcccagctcatcttcatgcct
ggtaacacggcaaccgtggcaaccgttacccagcaaccccaggctcagcaacaacccatt
aaggaagtgatggccacttcctcctttggcatccaatcagacaacaaccaggtccagaac
ctggctctgagaggaccctcagaccctaagggtcccggggtgaagaccgagaccttcgag
aaaatcgactcagtccctcacggtggggcccagcccctcccccagcctcccatcaagccc
ctccctccccccctcccccacatcaagatcccctcctacccccagcccgcccacctcaag
gcccacccccccccctccccctcaatccccctctcccagctcctcctccacggcccgcgc
tccgtctccacggtgaccgccactgccacggcaacccacctcctggtgcctccgcccccc
ccacacggttaccaggcgaccctgaagccgggggcgggggtcctgaagccggggacgggg
gcccagaccctggtggtgcagcccctgcagaaggcctccctgggccccgagaagcccctc
cccatccagtccaagggcccgcagggggtccggccccccctccagctgccctcacgcacg
ccgccgcccatccgccccgccccggccccgccctcctccctggccacgcccccggcggcc
ccgccccacatcccggtgcagatcgtgggcgcccggcagagctcgctgggcagctcgctg
gcccaggcccgggggggggggccgggggcccgggggggggcgggggggcccctgctcacc
gtggttgcggccatagcctcgcgtgagggcggggtcacggcatgccgaggggcggggctt
aaggcgctccagtcaccgcaggaagtggcgccgttggcccgcgtcactcacgtccacccc
caggccaatcagagcggggggcggggccagaacggagtcctgacccccggctcctcctcc
tcctcccagccggtgggcgcttcctcttcctcctcctctgctcttcctcctccgtcgtcc
tcctcgcagctgcgtccgtctgcgacccttccccaggcgcccggcgaccagaggggagcg
ttgccaggggtgacggccaatggcagtgcggcgggaggtcacggcacacaggggaggcag
acgactggatcgttgaagaggaagtctgaatccagctcggccaatggggaggaaggccct
gccccggcgcggctccaaccaatcagagatcttccgtcagcgctctcgaccgctgccgtt
gaagcaggccctggtttgaatccccccgccccctccctgccgctgtccatcacccgggtg
ggcgtcggccagctggagaaggccccgcccccccaggctgtggtgaagccccaggtgctt
actcacctcatcgagggcttcgtcatacaggaaggggctgagccattcccggtatgtgga
ccagtgaaggaaccagcgggggagggattgaccagtgactttccagacgtcaacagccaa
tcagacacagtaaccacagcaacagtgttgaagtgtgagtactgcggcagtctggccccc
gcccggcagttcagaggaacccgccgcttctgctccatgtcctgcgccaagaggtacaac
gtcagcttccgcctgaaacacagccagggtcacggccagggtcaaggtcgccatcatcac
ccccaaggtcaccactcggacggggaaggagtggttgctaggagacgggtcccccacagg
accagctcggagatcgccagcgcacggatcgctggccgcgccctacctgcccagtgccgc
tctgagtctagccaatcagacgacggttccagcatcgacgaggaagaagatgacgaggac
gaagatgaggaagatgagcaagatgagcccatgtcactatctcccgccaactctccttcc
tgcacacaggccccgccccctcctccactcccattggacagccctgctagccccgcccac
tggagtgtggaggaagtgtctcagttcatttcctctctgcaaggctgtgaggagttgagc
tcacacttcctgtcccaggagattgacggacaggcgctcctgctactcagagaggagcac
ctcatgtccaccatgaacatcaagctaggtcccgccctcaagatctgcgcccacattaac
actctcagagactga
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