Gadus morhua (Atlantic cod): 115537064
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Entry
115537064 CDS
T10832
Symbol
tnfrsf11a
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115537064 (tnfrsf11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
gmh04050
]
115537064 (tnfrsf11a)
04090 CD molecules [BR:
gmh04090
]
115537064 (tnfrsf11a)
Cytokine receptors [BR:
gmh04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
115537064 (tnfrsf11a)
CD molecules [BR:
gmh04090
]
Proteins
115537064 (tnfrsf11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Ephrin_rec_like
Motif
Other DBs
NCBI-GeneID:
115537064
NCBI-ProteinID:
XP_030204545
Ensembl:
ENSGMOG00000032257
UniProt:
A0A8C5A917
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All DBs
Position
23:16132880..16148458
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AA seq
707 aa
AA seq
DB search
MRLNFTTSWIFQGWITLFVLALYAQKTFAKSIQCGLNQYQIKGSKCCDLCGPGFRLNIEC
SGSKETKCLRCSSGEYQPGWTQEKKCLPLSTCDKGKGFMPRPENPLAEEPCRCRPGLQCS
LINCEYCEAVPTCGPGYGLEPDLESTTGRRACAPCKRGFFSNDENQEPCTQWMSCKSLGR
SELQPASPKNDAVCGPLVTGGATSWVIVSVLSVITVLSLLILLLFCYKDKLKLLSVNLRS
CIQNLKRTRIQQETLAPLYHSGARTLGAGATEVGPGEANYIMCETTKLICQAPHSLPPEP
LYPGLTHSPSDDAKVSMLCTACTEVSDQGREQEVMSLRRKLAAEEGSERSGEPEEVSDDE
GGGEEKGTQEEEKEKEVEKEEEVVVAGEGPSLTAGSCVCVAPAREPLEVGENEDCSQAVS
HEALSACSCGGRGQGRGRDHEVPRRREEGSEVTSRAKGGGGGGESSESSGSSLIRPSTPT
VRVPSSPVPPHTQTQTRTRPEHKPHPSERPHVQSLETIRLTSTDSDSTKTSAPSKAFVPS
SPPKPVPLLMSPLPAGDLYLGKTHEAPNTPEWSQGVSWGPSGGNKLLSGGLELECPPESL
QSQLAEPAPTSGQVTGNHNTTFISNGQVMNFSGDVIVVYVSQSSVGEEEGAEPGAAFGSP
VQEQANDLLRSCQRQHHGTPGDSITQNACHASTLPVQEVMADWSRGK
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgaactttaccaccagttggatatttcagggttggatcaccttgttcgtgttg
gccctttacgcacagaaaaccttcgctaaatccatccagtgtgggcttaaccagtaccaa
atcaaaggatcgaagtgttgtgacctgtgtggaccaggtttccgattgaatattgagtgc
agcggctcaaaggaaaccaaatgtttgaggtgtagttcaggtgaataccagccaggatgg
acccaggagaagaaatgtctcccgctgagtacctgtgataagggaaagggcttcatgccg
cggcctgagaacccgctggctgaggagccgtgtagatgccggcccggcctgcagtgctcg
ctcatcaactgtgagtactgcgaggccgtgcccacctgcggccccggctacggactggag
cctgacctcgagtccaccacagggcggagggcctgtgctccctgtaagagaggcttcttt
tcaaacgacgagaaccaggaaccatgcacacagtggatgagctgtaagagcctggggaga
agtgagctgcagccggccagccccaagaacgatgccgtctgcggaccccttgtcacgggt
ggggccacctcctgggtgattgtgtcggtgctgtccgtcatcaccgttctctctctgctc
atactgctgctcttctgctataaggacaagctgaagctgctgtctgttaacctgcgatcg
tgcattcagaacctgaagagaacgaggatccaacaggaaaccctggccccgctctaccac
agcggagcccggacattgggggccggggccacagaggtgggccccggggaggccaactac
atcatgtgtgagaccaccaagctcatctgccaagctccccactcgcttcccccggagccc
ctgtaccctggtctgacccacagcccctccgacgacgccaaagtctccatgctctgcacg
gcttgcactgaggtgtccgaccagggacgggaacaggaagtgatgtcgctgaggaggaag
ctggccgccgaggaagggagcgagcggtcgggagagcccgaggaggtgtccgacgacgaa
ggaggaggggaggagaaggggacgcaggaggaggagaaggagaaggaggtggagaaggag
gaggaggtggtggtggcgggggaagggccctcgctgacggcgggctcctgcgtgtgcgtg
gcgccggcccgcgagcccctggaggtgggggagaacgaggactgcagccaggcggtcagc
cacgaggccctcagtgcctgctcctgtggtgggagggggcagggcagagggagggaccac
gaagtgccgaggaggagagaggaggggtcggaggtcacgagcagagccaagggcggcggc
ggcggcggtgagagcagcgaaagttcgggctcctctctcatccgccccagtacccccacc
gtaagggtcccatccagcccagtccccccacatacccagacccagaccaggacccggccg
gagcacaaaccccacccttctgagaggccacacgtgcaaagtctagagactattagactg
acgagcacggactctgactcaacgaaaacaagcgcaccctccaaagcgttcgtcccttca
tcgccccctaaacccgtccccctcctgatgtccccactgcccgccggagacctctaccta
gggaagacccacgaggcccccaacacaccagagtggagccagggagtttcctgggggccc
agtggagggaataagctcctctctgggggtctggaactggagtgcccccctgagagtctc
cagagtcagctggctgaaccagcccctacctcaggtcaggtgaccggaaaccacaacacc
accttcatctccaacggccaggtgatgaacttcagcggcgacgtcatcgtcgtctacgtc
agtcagtcttcggtgggggaggaggaaggggcggagcctggcgcggccttcggcagcccc
gtccaggagcaggctaacgacttgctccggagctgccagcgccaacaccatgggacgccg
ggggactccattacccagaatgcctgccatgctagcaccctgccagtccaggaagtgatg
gctgattggtcgagagggaagtga
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