Gadus morhua (Atlantic cod): 115537512
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Entry
115537512 CDS
T10832
Name
(RefSeq) beta-1,4-galactosyltransferase 2-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00052
Galactose metabolism
gmh00510
N-Glycan biosynthesis
gmh00513
Various types of N-glycan biosynthesis
gmh00514
Other types of O-glycan biosynthesis
gmh00515
Mannose type O-glycan biosynthesis
gmh00533
Glycosaminoglycan biosynthesis - keratan sulfate
gmh00601
Glycosphingolipid biosynthesis - lacto and neolacto series
gmh01100
Metabolic pathways
Module
gmh_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
115537512
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
115537512
00513 Various types of N-glycan biosynthesis
115537512
00515 Mannose type O-glycan biosynthesis
115537512
00514 Other types of O-glycan biosynthesis
115537512
00533 Glycosaminoglycan biosynthesis - keratan sulfate
115537512
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
115537512
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gmh01003
]
115537512
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115537512
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmh04147
]
115537512
Enzymes [BR:
gmh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
115537512
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
115537512
2.4.1.90 N-acetyllactosamine synthase
115537512
Glycosyltransferases [BR:
gmh01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
115537512
Membrane trafficking [BR:
gmh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
115537512
Exosome [BR:
gmh04147
]
Exosomal proteins
Exosomal proteins of breast milk
115537512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
DUF4131
DUF3290
Glyco_tranf_2_2
SP_C-Propep
Wzy_C
E1-E2_ATPase
Motif
Other DBs
NCBI-GeneID:
115537512
NCBI-ProteinID:
XP_030205350
Ensembl:
ENSGMOG00000025731
UniProt:
A0A8C5AHR6
LinkDB
All DBs
Position
23:complement(15511368..15515339)
Genome browser
AA seq
378 aa
AA seq
DB search
MPSDQEDRKPNNKLADWRDSCLLSSFALLLFLFRCLIYFRAKMNRLLRIILIVVLLAVSF
MLAVWLNNDHSYTHDHRYAELSLMADMIPEEQKESIVSKFNGSSPLPPCPPTPPGLVGPL
RIEFEWSRSMSDVRKASRENLQGGGRYKPLDCISQHKVAIIIPYRNRKDHLKHWLYYLHP
ILKRQQVDYGVYVINQHGEGTFNRAKLLNVGYVESLKEYAYDCFVFSDVDLVPMDDRNLY
RCHGEPRHMASAMDKFGFQMPYTNYFGGVVALSREQYMRINGFPNNYWGWGAEDDDMHKR
ITLKGMAVSRPDSRVGMYKMVRHLRDTHNEVNPQNPGQLHNTARTMDTDGINSLIYSLIK
IEKDELYTMIDVDIHAPN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtgatcaggaggacaggaagcccaataacaagttggctgactggcgtgatagt
tgtctcctttcctctttcgctttacttttatttttatttagatgtctcatttattttcgc
gcaaagatgaacagacttttaaggatcatcctcatcgtcgtgttgttggctgtgtcgttt
atgcttgcagtttggctaaataacgatcactcctatacacatgaccaccgatatgctgaa
ctaagccttatggcagatatgatacctgaagaacagaaagagtcaattgtctcgaagttc
aacggcagctctccgttgcctccttgtccccctacacctcccgggctggtgggtccactc
aggatagagttcgagtggagccggtcaatgagcgacgtccggaaagcgagtcgtgaaaat
cttcaggggggaggtcgatacaagccactggattgcatctctcagcataaggtggccatc
atcatcccctaccgcaaccgcaaggaccacctgaagcactggctctactacctgcacccc
atcctcaagcggcagcaagtggactacggcgtgtacgtcatcaaccagcacggcgagggc
accttcaaccgcgccaagctgctcaacgtgggctacgtggagtccctcaaggagtacgcc
tacgactgcttcgtcttctccgacgtggacctggtgcccatggacgaccgcaacctgtac
cgttgccacggcgagccccggcacatggcgtcggccatggacaagtttggcttccagatg
ccttacacaaactactttggcggcgtggtggccctcagcagggagcagtacatgcgcatc
aacggcttccccaataactactggggctggggcgccgaggatgacgacatgcacaagcgc
atcaccctcaagggcatggcggtgtcccggcccgactccagggtgggcatgtacaagatg
gtaaggcacctcagggacacccacaacgaggtgaacccgcaaaacccgggccagctgcat
aacacggcgaggaccatggacaccgacgggatcaactccctgatttactcccttatcaag
atcgagaaggatgagttgtacacgatgatcgacgtggacatccatgcgccgaattga
DBGET
integrated database retrieval system
