Gadus morhua (Atlantic cod): 115541001
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Entry
115541001 CDS
T10832
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase manic fringe-like isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00514
Other types of O-glycan biosynthesis
gmh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115541001
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115541001
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gmh01003
]
115541001
Enzymes [BR:
gmh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
115541001
Glycosyltransferases [BR:
gmh01003
]
Glycan extension
O-Glycan
115541001
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
115541001
NCBI-ProteinID:
XP_030208570
Ensembl:
ENSGMOG00000018640
LinkDB
All DBs
Position
3:13952118..13980473
Genome browser
AA seq
383 aa
AA seq
DB search
MHARWKLLIFPGFVVTFFVIIYLDGQLRSRHHRGPLPGLFQRSIQEARAPGRDAPSPASE
VAPRRDLLPGRNSAPERRFVDQSQLKLADIFLAVKTSGKFHKTRLALLMETWIARTKTHT
YIFTDTKDEDISSEGFNLVVTDCLSDHSQQALSCKMSAEYDHFMASDKRWLCHVDDDNYV
NGEGLRALLASFPQDGSFYVGRPSLDRPITAHELLEDNTTVVFPELCVVSYLLRFCVPAF
GSSCLSEGGQFLVCHRGRRLLSEPTVGREDAALGPVSKAQSYSGVRFEQTSARIRLPDDC
TVGFIVERRLGVSLVQSPLFHSHLENLLLLTPASIPWQATLSYGMFENKINSIELKGAFS
KEDDPSRFKTVHCRLYPLTSWCP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcgagatggaaacttctcatcttcccaggttttgtggtcacgtttttcgtaatc
atctacttggacggtcaactgcgatcgcgtcatcacagaggtccgctgccgggtctgttc
cagcggtccatccaggaggcgcgggccccggggagggacgcgccgagcccggccagcgag
gtggcaccacgccgtgaccttctccccgggagaaacagtgctcccgagcgcaggttcgtc
gaccagtcgcagctgaagttggctgatatattcttggcggtgaagacgagtggtaaattc
cataagactcgtctggcccttctcatggagacgtggatagcgcggaccaagacgcacaca
tatattttcacagacaccaaagatgaagacatctcatctgaaggctttaacctggtggta
acagactgtctgtcggaccacagccagcaggctctgtcctgcaagatgtctgctgagtat
gaccacttcatggcgtctgacaagaggtggctgtgtcacgtggacgacgacaactacgtc
aacggggaggggctccgggcgctgctggcctccttcccccaggacggcagcttctacgtg
ggcagacccagcctggaccggcccatcactgctcatgagctgctggaggacaacaccacg
gtagtgttccccgagctatgcgttgtgagctaccttctccggttctgtgttccagcattc
ggttcctcttgtctttcagagggaggtcagtttctggtttgccacagggggcgccggctt
ctgtctgagccgacggttggcagagaggatgctgccctgggcccggtgagcaaggcacag
tcatacagcggtgtgcggttcgagcagacctcggcccggatccgcctgccggacgactgc
accgtgggcttcatcgtggagcgcaggctgggggtctcgctggtccaaagccccctcttc
cactcccacctggagaaccttctgctgctcaccccggcaagcataccttggcaggcgaca
ttgagctacggcatgtttgagaacaagattaacagcatcgaactgaaaggagccttctcc
aaagaggacgacccctccagattcaagactgtacactgtaggctgtaccccttaaccagt
tggtgtccctga
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