Gadus morhua (Atlantic cod): 115542398
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Entry
115542398 CDS
T10832
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
115542398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmh03000
]
115542398
Transcription factors [BR:
gmh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
115542398
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
Zap1_zf1
zf-C2H2_4
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
115542398
NCBI-ProteinID:
XP_030210523
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All DBs
Position
4:34607853..34672611
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AA seq
1403 aa
AA seq
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METSASTGSERKDKMDTSGFGDLKKPSPSLTRAPHHLFPTFHAPIPIDVRHHEGRYHYEP
HALHAMHGPVGLAGSPVISDISLIRLSPAAAAMATGEASPFGPPPHPYAVSHHHMEHYLR
SVHASPSLSMISAARGLSPADLAHEQLKERGLLGLPPPGTSPVEYYHLMASHRTPYGDLL
MGGAAGAAHLGEYFSPVEAARFSSPRLTPRLNRKRALSISPLSDASIDLQTMIRTSPNSL
VAYINNSRSSSAAGSSYGHLSVGGISPSFAFPHPINPMAYQQLLSQQRGLSAFGHTPPLL
QPAPSYSSRHVGLGLNGMHNAIHHHHHHHRDSPPKSDSAVSSTVEPMVSKRSKVKTEMDG
LRSTSPCSPHGGLRGDSSKEEECERDEAKQEPEIVYETDCHWESCSLEYHTQEQLVHHIN
NDHIHGEKKEFVCRWDQCSREQKPFKAQYMLVVHMRRHTGEKPHKCSFEGCAKAYSRLEN
LKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIAGCTKRYTDPS
SLRKHVKTVHGPEAHITKRHRAEPPPRPPGGGPRENGDHHGSPGAGEDYVGVRSIKTESS
VVYQSSPGGQSSCSSEPSPLGGAAHHDGGVEPAGDRGGSPGPDVPDPLYDLFPIGSPGAG
GATVGLRLRRQPGLGHCLGYLKKEKLRTVRESCRWGGNPAPPSPRNSTTLPPIPAGGLPF
DYPKMAVGVSGSLPVPGLSDAGRHGKIPPGLGHPSERRDSTSSTLSSAYTLSRRSSGISQ
CFSSRRSSLTSQLDASRHNNNLSSTGSYDPISADMSRRSSEASLTCGDGPGAEGGRGGHP
TSLSLTPAQHYCLKARFAAATGGPPPTPLPDMERMSLKTCTALYGDARESSYLCKAAAAG
LSPRRHSNYAACTVMPHEVPSNGPRRASDPVRRAGLAPLRPPQMQRYNSVDALGSRGVPS
FPALSAADPRHRAAPVCLQTRGSLSRHPISENVTVETGARDAAEEEMMFQDDVLQRFSMQ
GGGQSAGRHPAAQSVRGNANLLQSSFHQRRTSAVNSTPQGSSSTERAVEWDQESLTTSAS
RGNLALVQQNENFGPLRSDLNSNQRMVQNSDYAALPHCANRNGGCGEHGTLPLKANLNET
VSCQYQLNRHTGVYDGTNVSASPSTNRQTGQNVNMQYSALEDGLMQVKLEDDQAWHRSCS
LASQHSMQSEGQGLRQPRPPTEPRSRDRCQSGPDATVTQTNLNLAYTNSDAVAQVLSIDS
INSSGNDNALYYTGQIQVFPANGNPDISAMVDLSQFVSSRAEDPPLPEFRQASRDMDPGD
TGSEEPIDFDSMLDDGDHSSLVSGALSPGLLRSFSQSSSRLTTPRNSVTLPSVPAGTGNM
AIGNMSSLLTALAEESKFLNLMS
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctccgcctccaccggcagcgagaggaaggacaagatggacacgagtggcttc
ggtgacctgaagaagccgtccccctcgctgacgagagcgccccaccacctcttcccaacg
ttccacgctccgatcccgatcgacgtgcgtcaccacgagggccgctaccactacgagccg
cacgcgctccacgccatgcacggccccgtgggcctggccggcagccccgtcatctcggac
atctccctgatccgcctgtcgccggccgccgccgccatggcgacgggcgaggcgtccccg
ttcggaccgccgccgcacccctacgccgtgagccaccaccacatggagcactacctgcgc
tcggtgcacgccagccccagcctgtccatgatctccgccgcccgcggcctcagccccgcc
gacctggcccacgagcagctgaaggagcggggtctgctcggcctgccccccccggggacc
agcccggtggagtactaccacctgatggccagccaccgcaccccctacggagacctgctg
atggggggcgcggccggggcggcacacctgggggagtacttcagccccgtggaggcagcc
cgattctccagccccagactgacccctcggctgaacagaaagcgagcgttgtccatctcc
ccgctgtccgacgccagcatcgacctccagaccatgatccgcacctcgcccaactccctg
gtggcctacatcaacaactcccgctccagctcagccgcaggaagctcctacggtcacctg
tctgtcggcggcatcagtccatccttcgccttccctcaccccatcaaccccatggcgtac
cagcagctgctctcccagcagcgggggctgagtgcctttggacacaccccccctcttctg
cagcccgcgccctcctactccagtcgccacgtcggcctgggcctcaacggcatgcataac
gccatccaccaccaccaccaccaccaccgcgactctccgccaaagagcgactcagcggtc
agcagcacggtggagcccatggtgagcaaaaggtcaaaggtcaagacggaaatggacggc
ctgcggtcgacgtcgccatgctccccgcatggggggctgcggggggactcctccaaggag
gaggagtgcgagcgggacgaggccaagcaggagccggagatcgtctacgagaccgactgc
cactgggagtcctgcagcctggagtaccacacccaggaacagctggtgcaccacatcaac
aacgaccacatccacggggagaagaaggagtttgtgtgccggtgggaccagtgctcccgg
gagcagaagcccttcaaggcccagtacatgctggtggtccacatgcgccggcacaccggg
gagaagccgcacaagtgcagcttcgagggctgtgcgaaggcctactcccgtctggagaac
ctgaagacccacctgcggtcccacacgggggagaagccctacgtgtgcgagcacgagggc
tgcaacaaggccttctccaacgcctcggaccgggccaagcaccagaaccgcacgcactcc
aacgagaaaccctacgtgtgtaagatcgcgggctgcaccaagcgctacacggaccccagc
tccctgaggaagcacgtgaagacggtgcacggccccgaggcccacatcaccaagaggcac
cgggccgagccccccccccggcccccgggcggcgggccccgggagaacggggaccaccac
ggctcgccaggggccggcgaggactacgttggcgtgcgctccatcaagacggagagcagc
gtggtgtatcagtccagccctggtggtcagtcgtcatgcagtagcgagccatcgccgctt
ggcggcgccgcccaccatgacggtggagtagagccggcgggggacaggggagggagcccg
ggcccggacgtcccggaccccctgtacgacctgttccccattggctccccgggggccgga
ggggcgacggttggccttcgcctacgtcggcagccgggcctcggtcactgcctggggtac
ctgaagaaggagaagctgaggacggtgagggagtcgtgcagatggggcggcaacccggca
ccaccctcccccaggaacagcaccacgctcccccccataccggcaggcgggctccccttc
gactatcccaaaatggccgtgggtgtttccggttccctccctgtccccgggctgtccgac
gcgggccgccacggcaagatcccccccgggctgggccatccgtcggagcgccgggacagc
acgtccagcacgctgagctccgcctacaccctgagccgccggtcctcgggcatctcccag
tgcttctccagccggcgctccagcctgacctcccagctggacgccagccgccacaacaac
aacctcagctccaccggctcctacgaccccatctccgctgacatgtcccggcgctccagt
gaggccagcctcacgtgcggggacgggccgggggccgagggaggtagaggaggccacccc
acctcgctcagcctcaccccggcccagcactactgcctgaaggccaggttcgccgccgcc
accggggggccgccgcccacgcccctccccgacatggagcggatgagcctgaagacctgc
acggcgctgtatggggacgcccgggagtcctcctatctctgcaaggccgccgcggccggt
ctttcccccaggcgccacagcaactacgccgcctgtaccgtgatgccccacgaggtgccg
tctaacggcccccgacgggccagcgacccggtgaggcgggccggcctggcgcccctccgg
ccgccccagatgcagcgctacaacagtgtggacgcgctgggcagtcgcggcgttcccagc
ttcccggcactttccgccgcggacccgagacatcgggccgcgccggtatgtctccagacg
cgcggcagcctcagccggcaccccatctcagagaacgtcaccgtggaaaccggggcgagg
gacgccgcagaagaagagatgatgttccaggatgacgtcctgcaacgttttagtatgcag
ggcggggggcaatcggcggggcgtcacccagcggcgcagagcgtacgagggaacgccaac
ctcttgcagtcgtccttccatcagagacggacgtcggccgttaattccaccccgcagggc
tctagtagcactgaaagggctgttgagtgggaccaagagtccttgacaacgagcgcatcc
agagggaacttggctctagtccagcaaaacgagaactttggacccctacgcagcgatctg
aactccaaccaacggatggttcagaacagtgattacgccgctcttccgcattgcgctaac
cgcaacggtggttgtggtgagcacgggacactccctctgaaagccaacctaaatgaaacc
gtaagctgtcagtatcagttgaaccgtcacaccggtgtttatgacggcaccaacgtgagc
gcgagtcccagcaccaaccgacagacaggacagaatgtgaacatgcaatacagcgctttg
gaagatggcctcatgcaggtcaaactggaggacgaccaggcatggcaccggagctgcagc
ctcgcctcccagcactcgatgcaaagcgaaggccaagggctgagacaaccgagaccaccg
acagaacccaggtcccgagacaggtgccagtcagggcccgacgcgacggtaactcagacc
aacctgaacctagcctacactaactcggacgcagtagcacaagtgttgtccatcgacagt
atcaacagcagcggcaacgacaatgccttgtactacactgggcagattcaggtctttcca
gccaacggaaaccctgacatatccgccatggtagatctgtcccagtttgtctccagtcgg
gccgaggaccctccattgccggagttccgacaggcttctagagacatggaccctggagat
accggatcagaggagccgatagactttgacagcatgctggacgatggggatcactccagc
ctagtatcaggagccctcagcccgggcctcctccgtagcttctcacagagctcctctcgc
ctcaccacccccaggaactcggtcacgctcccctccgtgccggctgggacggggaacatg
gccatcgggaacatgagctctctgttgactgctctggcagaggagagcaaattcctcaac
ttgatgtcttag
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