Gadus morhua (Atlantic cod): 115543658 Help Entry 115543658         CDS       T10832                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism gmh  Gadus morhua (Atlantic cod) Pathway gmh04115   p53 signaling pathway gmh04145   Phagocytosis gmh04148   Efferocytosis gmh04350   TGF-beta signaling pathway gmh04510   Focal adhesion gmh04512   ECM-receptor interaction gmh04518   Integrin signaling gmh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gmh00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     115543658   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115543658    04518 Integrin signaling     115543658  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     115543658    04148 Efferocytosis     115543658   09143 Cell growth and death    04115 p53 signaling pathway     115543658   09144 Cellular community - eukaryotes    04510 Focal adhesion     115543658   09142 Cell motility    04820 Cytoskeleton in muscle cells     115543658  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gmh04131]     115543658   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gmh00536]     115543658 Membrane trafficking [BR:gmh04131]  Endocytosis   Phagocytosis    Opsonins     115543658 Glycosaminoglycan binding proteins [BR:gmh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115543658 SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd EGF_3 EGF_CA TSP1_CFP_C TSP1_ADAMTS Amnionless TSP1_CCN EGF cEGF Laminin_G_3 Motif Other DBs NCBI-GeneID:  115543658 NCBI-ProteinID:  XP_030211959 Ensembl:  ENSGMOG00000015994 LinkDB All DBs Position 5:complement(10357363..10367360) Genome browser AA seq 1182 aa AA seqDB search MIIFKGTTRDFTMMRCSLALLLMLWSCESRSVAESGEDNSVYDLFELAKVSRRHNGVTQV RGADPNSPAYKVLNASLIPPVPDMSFRDLIDSIQTERGFILLLNLKQFKRTRGSLLTVEK TDGSGPIFEIISNGEAKMLDVVLSTKIQQQVVSIEDADLATGHWENITLFVQDDRVQLFV GCEEINVSEMDVPIYKVLSQELIDTARMRIAKGTVKDFKGVLQNVRFVFGTTLEAILRNK GCQSGVTLSGMMTLDNQMNGSSPAIRTHYTGHKSKDAPSVCGFSCEDISGMFKELKGLGV VVKQLSKALHQVVDDNMMIMDQIKTKDGVCVHNGIVHRNQDEWTMDGCTTCTCQNSATIC HEIKCPIIPCTNATVPKGECCPRCGSDPLAEDGWSPWSEWTHCSVTCGRGIQQRGRSCDR INNNCQGTSVQTRDCYLEECDKRFKQDGGWSHWSPWSSCSVSCGEGLITRIRLCNSPTPQ MGGKECEGEGRATELCKQSPCPIHGGWGPWSLWDTCSLTCGGGIQMRKRLCTDPAPKYGG NHCVGGGAMSQVCNKQECPIDGCLSSPCFAGAKCTSFPDGTFKCGRCPVGYRGNGIHCKD IDECKEVSDACHTHNGVHRCENTVPGYNCLPCPARYSGPQPFGRGVEQATAKKQVCKPRN PCQDGSHDCNKNANCVYLGIFSDTMFRCECKPGYAGNGYICGEDTDLDGWPNTELLCVTN ATYHCKKDNCPSLPNSGQEDHDKDGLGDECDHDDDNDGISDDRDNCPKVYNPAQYDADRD DIGDRCDNCVFEANTDQTDTDNNGEGDACAIDIDGDGILNEKDNCQYVYNVDQRDSDGDG VGDHCDNCPLQHNPDQIDSDSDLVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQVDHDKD GKGDACDHDDDNDGVPDEKDNCRLVPNPDQLDSDGDGRGDVCKDDFDQDKVLDIHDICPE NNDISETDFRRFQMVPLDPTGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFNAVDF SGTFFINTDRDDDYAGFVFGYQSSSRFYTVMWKQITQTYWSTTPTRAQGYSGLSIKVVNS TTGPGEHLRNALWHTGDTAGQVRTLWHDPRNIGWKDYTAYRWHLVHRPKSGLIRVVMYEG KRIMADSGNIYDKTYAGGRLGLYVFSQEMVYFSDLKYECRDS NT seq 3549 nt NT seq  +upstreamnt  +downstreamnt atgatcatattcaaaggtaccactcgggacttcaccatgatgcggtgcagcctcgctctg ctgctgatgctctggagctgtgagagtagaagtgtggcagagagtggcgaggacaacagt gtttatgacttattcgaacttgccaaggtgagcagaaggcacaacggagtgacccaggtt cgaggcgcagacccaaacagtcctgcctataaggtcctcaatgctagcctgatccccccg gtacccgacatgtccttccgggacctcatcgactccattcaaacagagagaggcttcatc ctcctcctcaatcttaagcagttcaagagaaccagggggagtcttttgactgtcgagaag accgacggatccggaccgatattcgagatcatatccaacggcgaggcgaaaatgctggat gtggttttatccaccaagatccagcaacaggtcgtgtcgattgaagatgcggatttagcg actggacattgggagaacatcaccctgttcgtgcaggacgaccgtgtgcagctttttgtc ggctgcgaggagataaatgtgtccgagatggatgtgccgatctacaaagtattgtcacag gaacttatagacactgcccgcatgaggatcgcaaagggaacagtgaaagacttcaaggga gtgcttcagaacgtacggtttgtctttggaaccactcttgaagccatcttgaggaacaag ggatgccaaagtggagtgaccttgtccggtatgatgaccctcgacaaccagatgaacggc tccagcccagccatcaggacccattacaccggccacaaaagcaaagatgcgccgtccgtg tgtggcttctcctgcgaggacatctctgggatgttcaaggagctcaagggccttggtgtg gtcgtcaagcagctgtccaaggccctgcaccaagtggtcgatgacaacatgatgatcatg gatcaaatcaagaccaaggatggagtgtgcgtgcacaacggcattgtgcacaggaaccag gacgagtggaccatggacggatgcacaacgtgcacctgccagaactcggccaccatttgt catgagatcaagtgccccattatcccgtgcaccaacgccaccgtgcccaagggagagtgc tgcccgcgctgcggaagcgaccccttggcagaggacggctggtccccgtggtccgagtgg acccactgctcggtgacctgcggccggggcatccagcagcgcggacgctcctgcgaccgc atcaacaacaactgccagggcacctcggtgcagacccgggactgctacctcgaggagtgc gacaagcgcttcaaacaggacggtggttggagccactggtctccttggtcctcctgctcc gtgtcctgtggcgagggcctgatcacgcgcatccgcctgtgcaactcccccacgccccag atgggtggcaaagagtgtgaaggagaaggacgcgccactgagctttgcaagcagtctcct tgtcctatccatggtggatggggaccctggtctctctgggacacctgctccttgacgtgt ggtggtgggatccagatgcgcaaacgtctctgcacggacccggcaccaaaatatggagga aaccattgtgttggtggtggcgccatgtctcaagtgtgcaacaagcaggagtgtcctatc gatggttgcctctccagtccttgcttcgctggagccaagtgcaccagtttccccgatggc accttcaagtgtggccggtgtccggttggctacagaggaaatggcatccactgcaaggac atcgacgagtgtaaagaggtctccgacgcctgtcacacacacaacggggtgcatcgctgt gaaaacacagtgcctggctacaactgtttgccctgccccgcccggtactccggaccccag ccattcgggaggggggtcgagcaagccaccgccaagaaacaggtctgcaagcctcgtaat ccttgccaggacgggagccacgactgcaataaaaatgccaactgtgtctacctgggcatc ttctctgataccatgttccgctgcgagtgcaagccaggatatgctggcaatggctacatc tgtggagaagacactgacttggatggatggcccaacacagagctgttgtgtgtgacgaac gctacataccactgcaagaaggataattgtcccagcctgcccaactctggtcaggaagat catgacaaagatggcctgggggatgagtgtgaccatgatgatgacaacgatggaatctct gatgatagggataactgccccaaagtgtacaaccctgcccagtacgacgctgacagagac gacattggcgatcgctgtgacaactgtgttttcgaagctaacacggatcaaaccgacacc gacaacaacggcgagggggacgcttgcgccattgacatcgacggcgacggcattctgaac gagaaggacaactgtcagtacgtctacaatgtggaccagagggattccgacggggatgga gttggagaccactgtgacaactgccctcttcagcacaaccctgaccagattgactcagac tcagacctcgtgggggacaagtgcgacagcaaccaggacatcgacgaggatgggcaccaa aacaacctggacaactgtccatacatccccaacgcaaaccaggtcgaccacgacaaggac ggcaagggcgacgcctgtgaccacgacgacgacaacgatggcgtccccgacgagaaagac aactgtcgtttggtgcccaaccctgaccagctggactctgatggggatggccgaggggat gtttgcaaagatgactttgaccaggacaaagtgctggatatccatgacatctgcccagag aacaatgacatcagcgaaacagacttccgcaggttccagatggttcctctggacccgaca ggcacctctcagatcgaccccaactgggtggtccggcatcagggcaaggagctggtgcag accgtcaactgcgatcctggcatcgctgtcggttatgatgagttcaatgcggtggacttc agcggaacattcttcatcaacacggacagagacgatgactacgccggctttgtttttggc taccagtccagctcgcgcttctacaccgtgatgtggaagcagatcacacagacctactgg tccaccacgcccaccagagcccagggctactctggcctgtcaatcaaagtggttaactcc actacagggcctggcgaacatctgaggaatgctctctggcacacgggagacacggccgga caggtgcgtactctgtggcacgaccccaggaacattggctggaaggactacacagcctac agatggcatttggtgcacagacccaagagtggactcatcagggtggtgatgtacgaaggc aagaggatcatggcggattccggaaacatctacgacaaaacgtacgctggtggacgcctc ggcctctacgtcttctcccaggagatggtgtacttctccgacctcaaatatgagtgcaga gattcataa

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