Gadus morhua (Atlantic cod): 115543658 Help Entry 115543658         CDS       T10832                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism gmh  Gadus morhua (Atlantic cod) Pathway gmh04115   p53 signaling pathway gmh04145   Phagosome gmh04148   Efferocytosis gmh04350   TGF-beta signaling pathway gmh04510   Focal adhesion gmh04512   ECM-receptor interaction gmh04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:gmh00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     115543658   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115543658  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     115543658    04148 Efferocytosis     115543658   09143 Cell growth and death    04115 p53 signaling pathway     115543658   09144 Cellular community - eukaryotes    04510 Focal adhesion     115543658   09142 Cell motility    04820 Cytoskeleton in muscle cells     115543658  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:gmh04131]     115543658   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:gmh00536]     115543658 Membrane trafficking [BR:gmh04131]  Endocytosis   Phagocytosis    Opsonins     115543658 Glycosaminoglycan binding proteins [BR:gmh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115543658 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd EGF_3 EGF_CA TSP1_CFP_C TSP1_ADAMTS Amnionless TSP1_CCN EGF cEGF Laminin_G_3 Motif Other DBs NCBI-GeneID:  115543658 NCBI-ProteinID:  XP_030211959 Ensembl:  ENSGMOG00000015994 UniProt:  A0A8C5F8U6 LinkDB All DBs Position 5:complement(10357363..10367360) Genome browser AA seq 1182 aa AA seqDB search MIIFKGTTRDFTMMRCSLALLLMLWSCESRSVAESGEDNSVYDLFELAKVSRRHNGVTQV RGADPNSPAYKVLNASLIPPVPDMSFRDLIDSIQTERGFILLLNLKQFKRTRGSLLTVEK TDGSGPIFEIISNGEAKMLDVVLSTKIQQQVVSIEDADLATGHWENITLFVQDDRVQLFV GCEEINVSEMDVPIYKVLSQELIDTARMRIAKGTVKDFKGVLQNVRFVFGTTLEAILRNK GCQSGVTLSGMMTLDNQMNGSSPAIRTHYTGHKSKDAPSVCGFSCEDISGMFKELKGLGV VVKQLSKALHQVVDDNMMIMDQIKTKDGVCVHNGIVHRNQDEWTMDGCTTCTCQNSATIC HEIKCPIIPCTNATVPKGECCPRCGSDPLAEDGWSPWSEWTHCSVTCGRGIQQRGRSCDR INNNCQGTSVQTRDCYLEECDKRFKQDGGWSHWSPWSSCSVSCGEGLITRIRLCNSPTPQ MGGKECEGEGRATELCKQSPCPIHGGWGPWSLWDTCSLTCGGGIQMRKRLCTDPAPKYGG NHCVGGGAMSQVCNKQECPIDGCLSSPCFAGAKCTSFPDGTFKCGRCPVGYRGNGIHCKD IDECKEVSDACHTHNGVHRCENTVPGYNCLPCPARYSGPQPFGRGVEQATAKKQVCKPRN PCQDGSHDCNKNANCVYLGIFSDTMFRCECKPGYAGNGYICGEDTDLDGWPNTELLCVTN ATYHCKKDNCPSLPNSGQEDHDKDGLGDECDHDDDNDGISDDRDNCPKVYNPAQYDADRD DIGDRCDNCVFEANTDQTDTDNNGEGDACAIDIDGDGILNEKDNCQYVYNVDQRDSDGDG VGDHCDNCPLQHNPDQIDSDSDLVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQVDHDKD GKGDACDHDDDNDGVPDEKDNCRLVPNPDQLDSDGDGRGDVCKDDFDQDKVLDIHDICPE NNDISETDFRRFQMVPLDPTGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYDEFNAVDF SGTFFINTDRDDDYAGFVFGYQSSSRFYTVMWKQITQTYWSTTPTRAQGYSGLSIKVVNS TTGPGEHLRNALWHTGDTAGQVRTLWHDPRNIGWKDYTAYRWHLVHRPKSGLIRVVMYEG KRIMADSGNIYDKTYAGGRLGLYVFSQEMVYFSDLKYECRDS NT seq 3549 nt NT seq  +upstreamnt  +downstreamnt atgatcatattcaaaggtaccactcgggacttcaccatgatgcggtgcagcctcgctctg ctgctgatgctctggagctgtgagagtagaagtgtggcagagagtggcgaggacaacagt gtttatgacttattcgaacttgccaaggtgagcagaaggcacaacggagtgacccaggtt cgaggcgcagacccaaacagtcctgcctataaggtcctcaatgctagcctgatccccccg gtacccgacatgtccttccgggacctcatcgactccattcaaacagagagaggcttcatc ctcctcctcaatcttaagcagttcaagagaaccagggggagtcttttgactgtcgagaag accgacggatccggaccgatattcgagatcatatccaacggcgaggcgaaaatgctggat gtggttttatccaccaagatccagcaacaggtcgtgtcgattgaagatgcggatttagcg actggacattgggagaacatcaccctgttcgtgcaggacgaccgtgtgcagctttttgtc ggctgcgaggagataaatgtgtccgagatggatgtgccgatctacaaagtattgtcacag gaacttatagacactgcccgcatgaggatcgcaaagggaacagtgaaagacttcaaggga gtgcttcagaacgtacggtttgtctttggaaccactcttgaagccatcttgaggaacaag ggatgccaaagtggagtgaccttgtccggtatgatgaccctcgacaaccagatgaacggc tccagcccagccatcaggacccattacaccggccacaaaagcaaagatgcgccgtccgtg tgtggcttctcctgcgaggacatctctgggatgttcaaggagctcaagggccttggtgtg gtcgtcaagcagctgtccaaggccctgcaccaagtggtcgatgacaacatgatgatcatg gatcaaatcaagaccaaggatggagtgtgcgtgcacaacggcattgtgcacaggaaccag gacgagtggaccatggacggatgcacaacgtgcacctgccagaactcggccaccatttgt catgagatcaagtgccccattatcccgtgcaccaacgccaccgtgcccaagggagagtgc tgcccgcgctgcggaagcgaccccttggcagaggacggctggtccccgtggtccgagtgg acccactgctcggtgacctgcggccggggcatccagcagcgcggacgctcctgcgaccgc atcaacaacaactgccagggcacctcggtgcagacccgggactgctacctcgaggagtgc gacaagcgcttcaaacaggacggtggttggagccactggtctccttggtcctcctgctcc gtgtcctgtggcgagggcctgatcacgcgcatccgcctgtgcaactcccccacgccccag atgggtggcaaagagtgtgaaggagaaggacgcgccactgagctttgcaagcagtctcct tgtcctatccatggtggatggggaccctggtctctctgggacacctgctccttgacgtgt ggtggtgggatccagatgcgcaaacgtctctgcacggacccggcaccaaaatatggagga aaccattgtgttggtggtggcgccatgtctcaagtgtgcaacaagcaggagtgtcctatc gatggttgcctctccagtccttgcttcgctggagccaagtgcaccagtttccccgatggc accttcaagtgtggccggtgtccggttggctacagaggaaatggcatccactgcaaggac atcgacgagtgtaaagaggtctccgacgcctgtcacacacacaacggggtgcatcgctgt gaaaacacagtgcctggctacaactgtttgccctgccccgcccggtactccggaccccag ccattcgggaggggggtcgagcaagccaccgccaagaaacaggtctgcaagcctcgtaat ccttgccaggacgggagccacgactgcaataaaaatgccaactgtgtctacctgggcatc ttctctgataccatgttccgctgcgagtgcaagccaggatatgctggcaatggctacatc tgtggagaagacactgacttggatggatggcccaacacagagctgttgtgtgtgacgaac gctacataccactgcaagaaggataattgtcccagcctgcccaactctggtcaggaagat catgacaaagatggcctgggggatgagtgtgaccatgatgatgacaacgatggaatctct gatgatagggataactgccccaaagtgtacaaccctgcccagtacgacgctgacagagac gacattggcgatcgctgtgacaactgtgttttcgaagctaacacggatcaaaccgacacc gacaacaacggcgagggggacgcttgcgccattgacatcgacggcgacggcattctgaac gagaaggacaactgtcagtacgtctacaatgtggaccagagggattccgacggggatgga gttggagaccactgtgacaactgccctcttcagcacaaccctgaccagattgactcagac tcagacctcgtgggggacaagtgcgacagcaaccaggacatcgacgaggatgggcaccaa aacaacctggacaactgtccatacatccccaacgcaaaccaggtcgaccacgacaaggac ggcaagggcgacgcctgtgaccacgacgacgacaacgatggcgtccccgacgagaaagac aactgtcgtttggtgcccaaccctgaccagctggactctgatggggatggccgaggggat gtttgcaaagatgactttgaccaggacaaagtgctggatatccatgacatctgcccagag aacaatgacatcagcgaaacagacttccgcaggttccagatggttcctctggacccgaca ggcacctctcagatcgaccccaactgggtggtccggcatcagggcaaggagctggtgcag accgtcaactgcgatcctggcatcgctgtcggttatgatgagttcaatgcggtggacttc agcggaacattcttcatcaacacggacagagacgatgactacgccggctttgtttttggc taccagtccagctcgcgcttctacaccgtgatgtggaagcagatcacacagacctactgg tccaccacgcccaccagagcccagggctactctggcctgtcaatcaaagtggttaactcc actacagggcctggcgaacatctgaggaatgctctctggcacacgggagacacggccgga caggtgcgtactctgtggcacgaccccaggaacattggctggaaggactacacagcctac agatggcatttggtgcacagacccaagagtggactcatcagggtggtgatgtacgaaggc aagaggatcatggcggattccggaaacatctacgacaaaacgtacgctggtggacgcctc ggcctctacgtcttctcccaggagatggtgtacttctccgacctcaaatatgagtgcaga gattcataa

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