Gadus morhua (Atlantic cod): 115543881 Help Entry 115543881         CDS       T10832                                  Name (RefSeq) otoferlin-like isoform X1   KO K19949   otoferlin Organism gmh  Gadus morhua (Atlantic cod) Brite Membrane trafficking [BR:gmh04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     115543881 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Other DBs NCBI-GeneID:  115543881 NCBI-ProteinID:  XP_030212399 Ensembl:  ENSGMOG00000019382 LinkDB All DBs Position 5:3944646..3982356 Genome browser AA seq 1724 aa AA seqDB search MEPSAGRPMDYQVSVTVVEARQLVGLNMDPVVCVEIGDDKKYTSMKESTNCPYYNEYFVF DFHVPPDVMFDKILKLSVIHSKNLLRSGTLVGSFKMDVGTIYTQPEHQFYHKWAALSDPE DITAGCKGYIKCDIAVVGKGDNIKTPHKANESDEDDIEGNLLLPEGVPAERQWARYYLKI YRAEGLPRMNTSIMANVKKAFIGDNKDLVDPYIQVQFAGQKGKTTIQKSSYEPIWNEQIV FTEMFPPLCKRMKLQLRDADKVNDVAIGTHFLDLRKISNEGEKGFLPTLGPAWVNMYGST RDYTLMDEYQELNEGLGEGVSFRARLLISLGLELLDTSSPEITCSTEVQVEGVPNISESA TGKVEEFFLFGSFLEATMIDRKIGDKPISFEVTIGNYGNETDGVYKPKGKGRKGSGDEEE SELIQNSSDEEIDDDPDLAAVASTPPMKPVITDRNYFHLPYFERKPCIYIKSWWQDHRRR LYNANIIDNLADKLEEGLNDVQEIIKTEKAYPERRLRGVLEELSIGCSQYLALANKDQSQ SGRTRLDRERLKLCLAEVESIGQQAKTMRSQVKKSTVRDKIKLAQNFLLKLRFMAEEPQH SVPDVFIWMLSNGKRMAYARVPSKDILFSSVDEETGKECGKVKTVFLRIPGKKGFGPAGW TVQAKLEVYLWLGLNRQRKDYLSGLPNGFEENKLSRPGLPPSPPISLTYMMKQIFQLRVH MYQARSLFAADSTGLSDPFARVFFSTQSQVTEVLAETLCPTWDQLMVFENVELFGTAVEL RDDPPIIVIEIYDQDTVGKADFMGRTFAKPVVKMADEHYGPPRFPPQLEYYQIYRGNCTA GEMLAAFELLQIGPNGKADLPPIDGPTDFDRGPILPVPLGIRPVLSKYRIEVLFWGLRDL KRVNLAQVDRPRVDIECAGKGVQSALIPNYKKNPNFSTLVKWFEVDLPENELLHPPLNIR VVDCRAFGRYTLVGSHAVTSMRKFIYRPPDKQANNWSSSEEIVVVSLEPEQNFKKMDTVV KLDSGSDAVIKVEDDDGKGKKKKRKKGGEDPEEDELDESMLDWWSKYFVSIETLTETLRS QETALSDSEDKDDMDITEGGEIKPDDFPVKAKRGKKKKKSTETPERKKPKLDELKVYPKE LEAEFGNFEDWLHVFNLYRGKSGDDEDQNMADEDRLIGKFKGSLCMYKVPLSEDFSRESG FDASMGMFQNIPHNDPINVLVRVYVIRATDLHPADINGKADPYIAIKLGKSDIKDKENYI SKQLNPLFGKSFDIEATFPMDSTLTVSIFDWDMVGTDDLIGETRVDLENRYFSKHRATCG VASNYAIHGYNVWRDPMKPSHVLAKLCKEGKLDGPHYGPGGRVKVANRVFMAGTEIEDDN GLKKPTEEHLALTVLRHWEDIPKVGCKLIPEHVETRPLLHPDKPGIEQGRIEMWVDMFPK EMTAPGPALDISPRKPKKFELRVIIWNTDEVVLEDDDIFTGEKSSDIFVRGWLKGQQEDK QDTDVHYHSITGEGNFNWRFVYPFDYLMAEEKIVISKKESMFAWDETEYKIPARLNLQVW DADHFSADDFLGAIELDLNRFPRGAKTPKQCTIEMVTNEAEMPMVSIFKQKRIKGWWPFV ARNEEDEFELTGKVEAELHLMTGEEAEKGPVGEGRNEPEPLEKPNRPDIALLWFLTPFKA IKNLLCNQYRWLTIKIVTALLLLALFGVFLYNMPGYMVKKMLGA NT seq 5175 nt NT seq  +upstreamnt  +downstreamnt atggagcccagtgcggggagacccatggattaccaagtgagcgtgacggtggtggaggcc aggcagctcgtgggcctgaacatggacccggtggtgtgtgtggagatcggcgatgacaag aagtacacgtccatgaaggagtccaccaactgcccgtactacaatgagtactttgtgttt gacttccacgtgcccccagacgtcatgttcgacaaaatcttgaagttgtctgtcattcat tccaaaaacctcctgcgcagtggtacactggtggggtcattcaaaatggacgttggcact atctatactcaaccagaacatcagttttaccataaatgggcagctctatcggaccccgaa gacatcacggccggatgtaagggctacattaagtgtgacatcgccgtcgtggggaaagga gacaacatcaaaactccacacaaggccaacgagtcggatgaggatgacattgaaggtaat ctgctgctcccagagggggttcctgcggagcgccagtgggcgcggtactacctgaagatc taccgggccgaggggctgcctaggatgaacaccagcatcatggccaacgtgaagaaggcc ttcataggggacaacaaggacctggtggacccctacatacaagtgcagttcgctgggcag aagggcaagaccacgattcagaagagcagctatgagcccatctggaacgagcagattgtt ttcactgagatgtttcccccgctgtgcaagcggatgaaactccaactccgggacgcggat aaggtcaacgacgttgccataggaacgcacttcctggatctgcgcaaaatttcaaacgaa ggagagaaaggcttcctccccacgctggggcccgcctgggtcaacatgtacggctccacc cgggactacaccctgatggacgagtaccaggagctgaacgagggcctgggggagggcgtg tccttcagggcccggctgctcatcagcctgggcctggagctgctggacacctcctcgccc gagatcacctgctccaccgaggtgcaggtcgagggcgtgcccaacatctccgagtccgcc acaggcaaggtggaggagttcttcctcttcggttccttcctggaggccaccatgatcgac aggaagatcggcgacaaacccatcagttttgaagtcacaataggtaactacggcaacgaa actgacggggtgtacaagcccaagggcaaggggaggaaggggagcggcgatgaggaggag tctgagctgatccagaactccagcgacgaggagattgatgacgacccagacctggccgcc gtggcgtccacgccccccatgaagcccgtcatcacggacaggaactacttccacctgccg tactttgagaggaagccctgcatctacatcaagagctggtggcaggaccaccggaggcgg ctgtacaacgccaacatcatagacaacctggcagacaaactggaggaggggctgaacgac gtgcaggagatcatcaagacggagaaggcctacccagaacgcagactccgtggggtcctg gaggagctgagcattggatgcagtcagtatttggccctggccaacaaggaccagagccag tcaggcagaaccaggctggaccgggagagactgaagctgtgcttggctgaagtggagagc atcggccagcaggccaagaccatgaggtctcaggtgaagaagagcaccgtgagagataag atcaagctggctcagaacttcctgctcaagctgcgcttcatggccgaggagccccagcac agcgtcccagacgtgttcatctggatgctgagcaatgggaagcgcatggcctacgcccgc gtgccctccaaggacatcctgttctccagcgtggacgaggagaccggcaaggagtgcggc aaggtcaagacggtgttcctcaggatcccgggtaagaagggctttggcccggcgggctgg acagtgcaggccaagctggaggtgtacctgtggctgggcctcaaccgccagcggaaggac tacctgagcggcctgcccaacgggttcgaggagaacaagctgtccaggcccggcctgccg ccctcaccccccatcagcctcacctacatgatgaagcagatcttccagctgagggtgcac atgtaccaggcccggagcctcttcgccgcagacagcaccggcctgtcggaccccttcgcc agggtcttcttctccacacagagccaggtcacggaggtgttggctgagaccctgtgcccc acctgggaccagctgatggtgtttgagaacgtggagctgttcggcacggcggtggagctg agggacgacccgcccatcatcgtcattgagatctacgaccaggacacggtggggaaggcc gacttcatgggccgaaccttcgccaagcccgtggtcaagatggccgacgagcactacggc ccgccgcgcttcccgccccagctggagtactaccagatctaccgcgggaactgcaccgcc ggggagatgctcgctgcctttgagctgctgcagatcggccccaacgggaaggccgacctg cctcccatcgacggccccaccgactttgaccgtgggcccattctgcccgtgcccctgggc atccggcccgtcctcagcaagtaccgcatcgaggtgctgttctggggcctgagggacctg aagagggtcaacctggcccaggtggaccggccccgtgtggacatagagtgtgccggcaag ggggtccagtcggccctcatcccaaactacaagaaaaaccccaacttcagcaccctcgtc aagtggtttgaagtggacctcccggagaacgagctgctccacccccctctcaacatccgg gtggtggactgtcgggcattcggccgctacaccctcgtgggctcccacgccgtcaccagc atgcgcaagttcatctacagaccccccgacaagcaggccaacaactggtcctcctcggag gaaatagttgtggtcagtttggaaccagagcagaacttcaagaagatggacactgtggtg aagctggactcaggttcagatgcagtgatcaaagttgaggatgatgatggaaaaggcaag aagaagaagaggaagaagggcggggaggacccggaggaggacgagctggacgagagcatg ctggactggtggtccaagtactttgtctccattgagaccttgacggagactctcaggtcc caggagacggctctgtctgactcagaggacaaggatgacatggacatcacagagggtgga gagatcaaaccggatgatttccccgtaaaagccaagagagggaagaagaagaagaagtcc actgagacaccagagaggaagaagcccaagctggacgagctcaaggtctacccaaaggag ctagaggcggaatttggcaacttcgaggactggctccatgttttcaacctgtacagaggg aagagtggcgacgatgaagaccagaatatggcagatgaggacagactcatagggaagttc aaagggtcactctgcatgtacaaagtgccactgtctgaagacttcagcagagagtcgggc tttgacgcaagcatgggcatgtttcagaacatcccgcacaacgatccaatcaacgtcctt gtcagggtctatgtcatcagggccaccgatctgcatccagcagacataaatggaaaagcc gacccctacattgccataaaactgggaaagtctgacatcaaagacaaggagaactacata tcaaaacagctgaatccgttgtttggcaagtcgttcgacatcgaagccacgttcccgatg gactccaccctgaccgtgtccatctttgactgggacatggtgggaaccgacgacctcatc ggggaaaccagggtcgacctggagaaccgctacttcagcaaacacagggccacgtgcggc gtggcctccaactacgccatccacggctacaatgtgtggcgggatcccatgaagccatcc catgtcctggctaagctctgcaaagagggcaagttggacgggcctcactacgggcccggg ggtcgggtgaaggtcgccaatcgagtgttcatggctggcaccgagatagaggatgacaac ggtttgaagaagccgaccgaggagcaccttgccctgacggtgttgaggcactgggaggac attccaaaagtgggctgcaaactgatccccgagcacgtagaaacccggcccctcctccac cctgataagcccgggatcgaacaggggaggatcgagatgtgggtggacatgttccctaaa gagatgactgcccctggacccgccctcgacatatcaccacggaagccaaagaagtttgaa ctgagggtgatcatctggaacacagatgaggttgtgttggaggacgatgacatcttcacc ggggagaagtccagtgacatctttgtacgaggctggctgaagggccagcaggaggacaag caggacaccgacgtccactaccactcaatcaccggcgagggcaacttcaactggcgcttc gtctaccccttcgactacctgatggccgaggagaagatcgtcatctccaagaaggagtcc atgttcgcctgggacgagacggagtacaagatcccggcccgcctcaatctccaagtgtgg gatgccgaccacttctctgcagacgacttcttaggcgccatcgagctggacctgaaccgc ttccctcggggcgccaaaacccccaagcagtgcaccattgagatggtgaccaacgaggcc gagatgcccatggtgtccatcttcaagcagaagaggatcaaaggatggtggccctttgtg gccagaaacgaggaggacgagtttgaactgacaggcaaggtggaggcggagctgcacctc atgaccggggaggaggccgagaaaggtcccgttggggagggacgcaatgagccagaacca ctggagaaacccaaccggccagacatcgctctcctctggttcctcacccccttcaaagcc attaaaaacctgctgtgcaaccagtacaggtggctgaccatcaagatcgtcacggcgctg ctcctgttggccctatttggcgtcttcctctacaacatgcccggctacatggttaagaag atgctaggggcgtag

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