Gadus morhua (Atlantic cod): 115546535
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Entry
115546535 CDS
T10832
Name
(RefSeq) short transient receptor potential channel 3-like
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115546535
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115546535
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Motif
Other DBs
NCBI-GeneID:
115546535
NCBI-ProteinID:
XP_030215956
Ensembl:
ENSGMOG00000002203
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All DBs
Position
7:complement(24431947..24445064)
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AA seq
893 aa
AA seq
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MNERRAARRGANRPGNSNPTRAQSRDNLLMYGDCAEAENCCSGHCLGPSDGVGRGGEGPS
AARLNAFKRRQVLRGPASMFCAPLSAPSDAEQHFLEAAEYGNIPEVRRMLLRSPSLNVNA
VDYMGQNALQLAVANEHLEVTELLLGRTDLARVGDALLLAISKGYVRITEALLAHLSFKD
SRRLTASPAQADMLDDFYAYDEDGTRFSHDVTPVILAAHCQEYEIVHTLLGKGATIDPPH
DYFCCCDSCNYQQQYDSFSHSRSRINAYRGLASPAYLSLSNQDPVLAALELSNELAVLAD
IEKEFKNDYHRLSTQCKDYVVGLLDLCRSTEEVEAILSGETHFEDSFEPPVRTSLTRLKL
AIKYELKKFVAHPNCQQQLLSIWYESLPGLRQQTTAVKLLVVLGVALGLPALAMAYWVAP
CSKLGRVMRSPFMKFVAHASSFTIFLALLVLNAADRFAGPPLLANMTHLHRPPAGGPSAP
QPDPLLLYRMTTTPFTWMETLIISWVIGMIWAEVKEIWSQGPGEYLLEPWNFLDFGIMAI
FLASFSCRFSAFSHALAAQTVVHQHYSGAFNLSLLPPELRYFTLARMDWLPSDPQLVSEG
LYAVAVVLSFSRIAYILPANESFGPLQISLGRTVKDIMKFMVIFILVFLAFMIGMFNLYS
YYLGAKENDAFTTLEESFKTLFWAIFGLSEVRSVVINNGHKFIENIGYVLYGVYNVTMVV
VLLNMLIAMINSSFQEIENDADVEWKFARAKLWFSYFEEGRTIPVPFNLVPSPKTLLGLA
TGLRDMLLHRLAGPGDPEPATAQLNQLGGSKGSGYSSATSPSRYQMIMKRLIKRYIIKAR
ADKESDEITEGELKEIKQDISSLRYELLEDQAQTTETLRRLLRNLEDSKPPSK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagagacgggcggcgcggcgtggagctaacagaccaggtaacagcaacccaacc
agggcgcagagccgcgacaacctcctcatgtatggtgactgtgccgaggctgaaaactgc
tgctccggtcactgcctgggccccagcgacggcgtcggtaggggtggcgaggggccatca
gcggcccggctgaacgccttcaagcggcggcaggtcctgcgaggccccgcctccatgttc
tgcgccccgctctcggccccctcggacgccgagcagcacttcctggaggccgcagagtac
ggcaacattcccgaggtgcggcgcatgctgctgcgctcgcccagcctcaacgtgaacgcc
gtggactacatgggccagaatgcattgcagctggccgtggccaacgagcacctggaggtg
accgagctgttgctaggcagaacggacctggcacgagtgggtgatgcccttctattggcc
atcagtaaggggtatgttcgtataacagaggctctgctggctcacctgtccttcaaagac
agtcgccgcctgaccgccagcccggcccaggcggacatgttggacgacttctacgcgtac
gatgaggacgggacgcgattttcccacgacgtgacaccggtgatcctggccgcccactgc
caggagtacgagatcgtccacacgctgctggggaagggggccaccatcgaccccccccac
gactacttctgttgctgcgactcctgcaactaccagcagcagtacgactccttcagccac
tcacggtccaggatcaacgcctaccgcgggctggccagccccgcctacctctcgctgtcc
aatcaggacccggtactggcggccctggagctgagcaacgagctggccgtgctggccgac
atcgagaaggagtttaagaatgactaccaccgcctgtccacgcagtgcaaagactacgtg
gtgggtctgctggacctctgtcgcagcaccgaggaggtggaggccatcctgagcggcgag
acgcactttgaggacagcttcgagccgcccgtccgcacctccctcacccgcctcaaactg
gcgattaagtacgagctgaagaagttcgtagcccatcccaactgccagcagcagctgctc
agcatctggtacgagagcctgccagggctccggcagcagaccaccgccgtcaagctgctg
gtggtcctgggtgtagcgctggggctgcccgccctcgccatggcctactgggtagccccc
tgcagcaagctgggccgggtgatgcgcagtccgttcatgaagttcgtggctcacgcctcc
tccttcaccatcttcctggctctgctggtgctcaacgccgccgaccgcttcgccggaccc
cccctgctggcaaacatgacccacctccatagaccccccgccggcgggccctctgccccc
cagccggaccccctgctgctctaccggatgaccaccacccccttcacctggatggagacc
ctcatcatatcctgggtcataggtatgatctgggcggaggtgaaggagatctggagtcag
ggtccgggggaatacctgctggagccctggaactttctagacttcgggataatggccatc
ttcctggcgtcgttcagctgccgcttctctgcgttcagccacgccctggcagcccagacc
gtcgtccaccagcactacagtggcgccttcaacctctcgctgctgcccccggagctcaga
tacttcaccctcgcgcggatggactggttgccctcggacccccagctggtgtcggaaggt
ctgtacgccgtggccgtggtgctcagcttctcgcggatcgcctacatcctgccggccaac
gagagcttcgggccgctgcagatctcgctgggcaggacggtgaaggacatcatgaagttc
atggtcatcttcatcctggtcttcctcgccttcatgatcggcatgttcaacctctactcc
tattacctgggggccaaggagaacgacgccttcaccaccttggaggagagcttcaagacg
ctgttctgggccatcttcggcctctccgaggtgcgctcagtggtgatcaacaacggacac
aagttcatcgagaacatcggctacgtgctgtacggcgtctacaacgtcaccatggtggtg
gtgcttctcaacatgctcatcgccatgatcaacagctccttccaggagatcgagaacgac
gcggacgtggagtggaagtttgccagggccaaactgtggttctcttacttcgaggagggc
aggaccatcccggtgcccttcaacctggtccccagccccaagaccctgctgggcctggcc
acgggcctcagagacatgctgctgcaccgcctggccgggcccggagacccagagccggcc
accgcccagctcaaccagttggggggcagtaaaggttccggatacagcagtgctaccagc
ccttcaagataccagatgatcatgaagcgtctgataaagcgttacatcatcaaagcacgg
gctgacaaggagagcgacgagatcaccgagggggagctgaaggagatcaagcaggacatc
tccagcctgcgctacgagctgctggaggaccaggcccagaccacagagaccctgaggagg
ctgctgaggaacctggaggacagcaagcctccttcaaagtag
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