Gadus morhua (Atlantic cod): 115547281
Help
Entry
115547281 CDS
T10832
Name
(RefSeq) beta-1,4 N-acetylgalactosaminyltransferase 1-like
KO
K00725
(N-Acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase [EC:
2.4.1.92
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh00600
Sphingolipid metabolism
gmh00604
Glycosphingolipid biosynthesis - ganglio series
gmh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115547281
09107 Glycan biosynthesis and metabolism
00604 Glycosphingolipid biosynthesis - ganglio series
115547281
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gmh01003
]
115547281
Enzymes [BR:
gmh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.92 (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase
115547281
Glycosyltransferases [BR:
gmh01003
]
Glycan extension
Glycolipid
115547281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
FKRP_N
Glyco_transf_64
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
115547281
NCBI-ProteinID:
XP_030217248
Ensembl:
ENSGMOG00000004324
LinkDB
All DBs
Position
1:7856111..7864902
Genome browser
AA seq
531 aa
AA seq
DB search
MRAISKKGLVLVMISGFLLLSLIYLWFPVKKQSVDIGLTQRGHIEKLLMEKNKDTLSSYH
DVPYVLKESVSRQLAYGTCECRGDENKINLPLPRILFPRVWANNLNHAYLESDPDPGGVI
GRRDKEYSAFQRRSYSPADLLIVAEANSPLQYPTQGVEVRPMKTIIIPGLGLKQDPRPTH
TVSLSVTMGTLDVAATVVGVSISGAGQNTMGLSSSVLSQLNRQLQFVTYTNTLFHPKTAD
TVLYGSGGHKAAFTIKVGHRAIPKLFNSGTNEGYNISALVTIATKTFLRYDKLRDMINSV
RKYYPTVLIVIADDNEHPQPVTGPHIDRYIMPFGKGWFAGRNLAVSQVTTKYVLWVDDDF
LFTESTKLEKMVDILEKTTLDLVGGAVTEVTGYSATYQHTFSVDEGGSEGDCLHIRQGHY
HSIQGFPSCVVADAVINFFMARTDKILRVGFNPQLSRRGHLEFFVDALGSLHVGSCSDVK
IGHASKIVLPWSKSESAKSYDRFRYSFTNSEGRMQTEVYYFKNRLKCMSSN
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccatctctaagaaaggtttggtcctggtcatgatcagtggttttctgctactg
agcctaatttacctgtggttcccggtcaagaaacaaagcgtggatatcggtctgacccag
agaggccacatagagaagctactgatggagaagaataaggacaccttaagctcttatcac
gacgtcccctacgttttaaaagagtctgtgtcacgtcagttggcgtacggtacgtgtgaa
tgccgaggtgatgagaataaaatcaacctgccattaccacgtatcctgttccctagagtg
tgggcaaacaatctcaaccatgcataccttgagtccgaccctgacccagggggggtgata
ggacgcagggacaaggagtacagtgccttccagagaaggtcctactctccagcagacctt
ctcatcgtagcggaggccaacagtccacttcaataccccacccagggagtggaggtgagg
cccatgaagaccatcattattcctgggttgggtctcaaacaagatccaagacctacacat
acggtgagcctgagtgtgacgatggggacactggacgtggctgccaccgttgtcggcgtg
tccatctcaggagcaggccagaacaccatggggctgtccagctctgttctgtcccaactc
aacaggcagctgcagtttgtcacctacaccaacaccctcttccaccccaagacggccgac
acagttctgtatggtagtggagggcacaaggcagctttcaccattaaagtgggtcatagg
gccatccctaaacttttcaactcgggtacaaatgaaggatacaacataagcgccctcgtt
accatagcaaccaagaccttcctacgttatgataaacttcgagatatgatcaacagcgta
cggaagtactacccgaccgtcttgatagtgatcgctgacgacaacgagcatcctcaaccg
gtgaccgggcctcacatcgaccgatacatcatgcccttcggaaagggttggtttgcgggg
agaaacctggccgtctcgcaggtgaccaccaagtatgtgctgtgggtcgacgatgacttc
ttgttcaccgaaagcactaagcttgagaagatggtggacatcctggagaagaccacatta
gacctggtagggggtgcggtaacagaggtgactggttactctgcgacctaccagcacacc
ttttctgtggatgaggggggctctgagggggactgcctccacatcagacagggccattac
cactccatacaggggttccccagctgcgtggtggccgacgccgtcatcaacttttttatg
gcgaggacggacaagatacttagggttgggttcaacccccagctctcacggcgtggccac
ttagagttctttgtggacgcgctgggatccctccatgtgggctcctgcagcgacgtgaag
ataggccacgcgtcgaagatcgtccttccctggagcaagtcagagtctgcgaagagctac
gacaggttccgttactccttcacgaacagcgaaggaaggatgcagactgaggtgtattac
tttaagaacaggttgaagtgcatgagcagtaactga
DBGET
integrated database retrieval system
