Gadus morhua (Atlantic cod): 115547826
Help
Entry
115547826 CDS
T10832
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmh01002
]
115547826
Peptidases and inhibitors [BR:
gmh01002
]
Metallo peptidases
Family M10
115547826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
Peptidase_M66
DUF4953
Metallopep
Motif
Other DBs
NCBI-GeneID:
115547826
NCBI-ProteinID:
XP_030218156
Ensembl:
ENSGMOG00000025911
LinkDB
All DBs
Position
7:complement(19827739..19831603)
Genome browser
AA seq
479 aa
AA seq
DB search
MRSLNLCIFLSLTAAVVYSLPLDRDQPPQQITHKDEEFAESYLKSFFNLTKEHERSFGRQ
GVNPMAEKLRDMQRFFGLNITGSVDADTMQMMKKARCGVPDTQVAPFSTSGGDLKWQTTA
LTYRILNYTPDMSRAEVDDSVEKALNVWARVTPLTFRRMERGTADIMISFARRSHGDSYP
FDGPQGTLAHAFAPSTGIGGDAHFDEDEDFTYRSTSGYVLFLVAAHEFGHSLGLGHSRDP
GALMYPNYIYKNPDTFQLPLDDVNGIQSLYGPNGNVNPNEPTPPTTPDSCDATMVLDAVS
TLRGEMLFFKGSFFWRKHPQNPRARQSLISSFWPNAPEKVDAAFESHQTDQVYLFKGRQV
WAFSGYDMVSGFPRNIDYFGLPRNVNKINAALYDTDTRRTLFFVGDQYYSYDEARRTMDA
GFPKSIETLLPGHTSKVTAGFQYRGYTYIYSGSNMLEYSLRTGKLIRVLRNDYFLPCAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcgctctttgaacctgtgcatcttcctgagcttgacggcggcagtggtttactccctg
cccctagacagagatcaaccgccacaacaaatcacccataaagatgaagaatttgcagag
agctacctcaagagcttcttcaacctcaccaaagagcatgagaggtcttttggtcgccag
ggggtcaaccccatggccgagaagctcagggacatgcagcgcttctttggcctgaatatc
actggctcagtggacgctgacaccatgcagatgatgaagaaggcccgctgcggggtcccc
gacacccaagtcgcccctttctctacttccgggggggaccttaagtggcaaacaacggcc
ctcacctacaggattctgaactacactccggacatgtcccgggcagaggtagacgattcc
gtggaaaaagcgttgaatgtgtgggccagggtcactcccctgacgtttcgaaggatggag
cgcggtaccgctgacatcatgatctccttcgcgagacgatcgcatggtgattcctacccc
ttcgacggcccccagggcaccctcgcccacgccttcgccccgtccacggggatcggcggc
gacgcccactttgatgaagacgaggatttcacctaccgttcaacaagtggttatgttctt
ttcctggttgcggcccatgagtttggacattccctgggcttgggccactccagggacccc
ggtgcgctcatgtacccaaattacatctacaagaaccccgacacgtttcagctgcccctc
gacgatgtcaacggaatccagtccctctatggtcctaatggcaatgtgaacccaaatgaa
cccacaccacccacaacccccgactcctgcgacgcaaccatggtcctcgacgctgtgagc
accctgaggggcgagatgctcttcttcaagggcagtttcttctggcgtaagcacccccag
aaccccagggcccggcagtccctcatctccagcttctggcccaacgcccccgaaaaagtc
gatgctgctttcgagagccaccagactgaccaggtctatcttttcaaaggtcgtcaagtc
tgggccttctccgggtatgatatggtgagcggctttcccaggaatatcgattatttcggt
ctgcctaggaacgtaaacaaaatcaatgctgccttgtacgataccgatacacgcaggacc
ctgttctttgtgggcgaccagtactatagttatgatgaggcaagacgaacgatggacgca
ggattccccaagtcaatagaaaccctcctcccaggacacaccagcaaggtgacggctgga
ttccagtacagaggttacacctacatttacagcgggtccaacatgcttgagtacagcctg
aggaccggaaagctgatccgtgtcctgagaaacgattacttcctgccatgcgctaactag
DBGET
integrated database retrieval system
