Gadus morhua (Atlantic cod): 115549502
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Entry
115549502 CDS
T10832
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1-like isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115549502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmh04131
]
115549502
Membrane trafficking [BR:
gmh04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115549502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDEase_I
PDEase_I_N
FYVE
GOLD_2
Motif
Other DBs
NCBI-GeneID:
115549502
NCBI-ProteinID:
XP_030220607
Ensembl:
ENSGMOG00000023934
LinkDB
All DBs
Position
8:8714010..8855952
Genome browser
AA seq
1575 aa
AA seq
DB search
MEAAQAMEANSRKQRFKKGRSATFSIDGFNITIVANEDGESSSKQVASFTRSKSQSALWN
AITAGMGIKGKPPKPPLDDPRSPEEILADEFPAADVPEATEKTAIRLRCLVKQLERGEAS
LVDLKKNLEYAATVLESVYVEETRRLVDTEDELSDIQSESVPSEVRDWLASTFTRQMGLM
LRRTEEKPRFRSIVHAVQAGIFVERMYRRTSNMVGLSYPTSVISVLKNVDKWSFDVFALN
EASSDHALKFIFYELLTRYDLISRFKIPISAVVSFVEALEVGYSKHKNPYHNLMHAADVT
QTVHYLLLKTGMVHWLTELEIFALIFAAAVHDYEHTGTTNNFHIQTRSDTAILYNDRSVL
ESHHVSAAYRLLQDDDEMNILYNLSKDDWRELRALVENLRGQLAERRRGSERAPSSEPNA
TPEESTQENASYLQLTSNAGNSALQERLSTAENKNVELLGKLDGALSEKGQQTASYCDSA
LKIQELIDQLKAAEEERLAARREADDWAKRAQQVIHKLKLREEETRRSSEEKLAKVKAAA
RGEQEQVLKRLEDLQGVVGRIEGALTLKEKEAGNLRSQLQDLQASLEHRERQAEELKKRL
REERRDVTWRSSNSQNEFLDSQLLDLREKLKDREQELAHSSERVKYLEAVVEKLDVEKKH
LNAGNDVFPIDQSKILEDYKSQCASLMEINAKLLQTVKRSEASNRELSESRAAMRDQLAS
LTASQNPLKVQEEAAMLSIEERETKLLEANQRLEEVVHKALLQSEASDATLKRLERDNKE
IMETQLSLKKQLASTQGYLDAIATKETQLGGQPLPCDFPQSRAEVTRSDGRKTDGEKSTA
EKPEKAQKLHNAHHHASHPDAGKRHLLAEAQLELNLREVTTLQDEVVELRAQLLAGAAER
MKVQALQEVTEASREDLRMLVEQLKAQVEELNRRHVDEILHSREREDTLGRQRDGEARVR
DDLAAEAAASREELRGLKLRYEAACLESAEAAEALHRANTETAELGVHVCTLSAEKEEAR
LRWEALSAKLRELEEEASRETQRLSARMEQLSRENRRLSERLGEEQGTGGRSGPPEEEEE
APQETETQQESCQTMSQADLPQGVNEELQELRSKLGVEREKAVLLESEVKQLEAENRRYS
EQIEGKSAQMSQSQLLVQQRDEELNQMKGKLLRTAEGLAMAEKSCEEMSDRLRRANQEQQ
SRDVKMAAELDDLYRTKINLEERLIELIRDKDELWQKSDALEFEQKLREEETERDVNHCL
DCHSQFSWWLRKYTCRLCGRPFCYYCCSNTVSTLQAGGGGGGGGAAGNRERCCRHCYDQH
SAVVERHPQEQDANAPDAPFGALPQPGDRAAAGGDDGVFDIITEEEVSGVYDSDSLSFST
ACSPGHGQEGAAQLRSGAGAEDPPPAAAVVVEPLTEEPEEAMAPAVQDAEICLLKAGELT
LSAPYTLEDIEGFGDASRELFVRSSCYSVVPITVGPVGPQDGPTVTWVFTSEPKSISFSV
VYREDPLTPPEDAKVLIPLTRCNSHKETIQGELKVRLPGEYTLVFDNSFSRFISKKVLYR
LSVAKPVVYDGSDCP
NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgcgcaagcgatggaagccaactctcggaagcagcggttcaagaagggtcgt
agcgccacgttcagcatcgacggcttcaacatcactatcgtagcaaacgaggatggggag
agctccagtaaacaagtcgccagtttcacgcgctccaagtcccagagcgccctgtggaac
gccatcacggcggggatggggatcaaaggcaagccgccgaagcccccgctggatgacccc
cgcagcccggaggagatactggccgacgagttccccgcagcagacgtcccggaggccaca
gagaagaccgccatcaggttaagatgtctggtgaaacagctggagaggggggaggcgtct
ctggtggacctgaagaagaacctagagtacgcggccaccgtgctggaatcggtgtacgtc
gaggagaccaggcgcctggtggacactgaggatgagctcagtgacatccagtcagagtcg
gtgccgtcggaggtgcgtgactggctggcctccaccttcacgcgccagatggggctgatg
ctgcggcgcaccgaggagaagccacgcttccgcagcatcgtgcacgctgtgcaggccggc
atcttcgtggagaggatgtacagacgcacttccaacatggttggactcagctaccctaca
tctgtaatatctgtgcttaagaacgtggacaaatggtcgtttgacgtgttcgccctgaac
gaggcgagcagcgaccacgccctcaagttcatcttctacgagctgctcacccgatacgac
ctcatcagccgtttcaagatccccatctcagcggtggtgtccttcgtggaggccttggaa
gtgggctacagcaaacacaagaacccctaccacaacctgatgcacgctgcggacgtcaca
cagaccgtgcactacctgctgctcaagacgggcatggtgcactggctgactgagctggag
atcttcgcactgatctttgcggccgccgtgcacgactacgagcacacagggaccacaaat
aacttccacatccagaccaggtcggacacggccatcctgtacaacgaccgctcggtgctg
gagagccaccacgtcagcgcggcataccgcctgctgcaggacgacgacgagatgaacatc
ctgtacaacctgtccaaggacgactggagagagctgcgggcgctggtggagaacctccgc
ggccagctggcggagcgccggaggggttcagagcgagccccgtcctctgagcccaacgcg
accccggaggagtccactcaggagaacgcaagctacctccagctcaccagcaacgccggc
aacagcgcgcttcaagagcgactgagcacggcggagaacaagaacgtggagctcttgggc
aagctggacggggcgctcagcgagaagggacagcagaccgccagctactgcgactcggcc
ttaaagatccaggagctcatagaccagctgaaggcggccgaagaggagaggctggcggct
cggagggaggccgacgactgggccaagcgggcccagcaggtgatccacaagctgaagctc
agggaggaagagacgcggaggtcgagcgaggagaagctggccaaggtgaaggccgcggcc
cgcggggagcaggagcaggtgctcaagcggctggaggacctccagggggtcgtgggtcgg
atcgagggggcgctgacgctgaaggagaaggaggcggggaacctgcggtcccagctgcaa
gacctgcaggcctcgctggagcaccgggagaggcaggcggaggagctgaagaagaggctg
cgggaggaacgacgagacgtgacgtggaggagcagtaacagccagaatgagttcctggac
agccagctgctggacttgagagagaagctgaaggaccgagaacaggagttggcccatagc
tcggagcgagtgaagtacctggaagccgtggtggagaagctagacgtggagaaaaaacac
ttgaacgctgggaacgatgtttttcccatcgatcagtccaagattctggaggactacaaa
tcccagtgcgccagtctcatggagataaacgcgaagctgctgcaaactgtgaaacggagt
gaggcgagcaaccgagaactgtctgagagcagggcggccatgcgggatcaactggcgtct
ttaacggcctcccagaaccctctaaaggtgcaggaggaggccgccatgctgagcatcgag
gagagagaaaccaaactcttagaggccaatcagcgtttggaggaagtggtccacaaggct
ctcctccagagcgaagcgtctgacgccaccttgaagaggctggagcgcgacaacaaggag
attatggagactcaattgtccttgaagaagcagttggcctccactcaagggtacctcgac
gcgatcgccacaaaggagacccagctcggaggtcagccgctcccgtgcgatttcccgcag
tccagggccgaggtgacgcggagcgacggcaggaagacggacggcgagaagagcaccgcg
gagaaaccggagaaggcgcagaagctccacaacgcgcaccaccacgcctcccacccggac
gccggcaagagacacctgctggcggaggcccagctggagctgaacctcagggaggtgacc
acgctccaggacgaggtggtggagctgcgggcccagctgctggccggcgccgccgagcgg
atgaaggtgcaggcgctccaggaggtgacggaggcctcccgggaggacctccgcatgctg
gtggagcagctcaaggcccaggtggaggagctgaaccgccggcacgtggacgagatcctc
cactcccgggagcgcgaggacaccctgggccgccagcgcgacggcgaggcccgggtgagg
gacgacctggcggcggaggcggcggcctcccgcgaggagctccgcggcctcaagctgcgc
tacgaggcggcgtgcctggagagcgccgaggcggccgaggccctacaccgggccaacacg
gagacggcggagctgggcgtgcacgtgtgcacgctcagcgccgagaaggaggaggcccgc
ctgcgctgggaggcgctgtcggccaagctgcgggagctggaggaggaggcgtcgcgggag
acgcagaggctcagcgcccggatggagcagctgagccgggagaaccggcggctctccgag
cggctcggcgaggagcagggaacgggggggcggagcgggcccccggaggaggaggaggag
gccccgcaggagacggagacccagcaggagagctgccagaccatgagccaagccgacctg
ccgcagggtgtgaatgaggagcttcaggagttgaggtccaagctgggggtcgagcgcgag
aaggcggtgcttctggagagcgaggtcaaacagctggaggcggagaatcggcgatacagc
gagcagattgaagggaaaagcgcgcagatgtctcaatctcagctcctcgttcagcagagg
gatgaggagctgaaccaaatgaaggggaaattattgaggacggcagagggcttggcaatg
gcggagaagtcctgcgaggagatgagcgacagactcagaagagccaatcaggaacaacag
agcagagacgtgaagatggccgccgagctggacgacctataccgcaccaagatcaacctg
gaggagcgactgatagagctgatcagggacaaagatgaactgtggcagaagtcggacgcc
ctggagtttgagcagaagctgcgagaggaggagacggagcgcgacgtcaatcactgcctg
gactgccacagccagttcagctggtggctccgcaagtacacctgcaggctgtgtgggcgt
cccttctgctactactgctgcagcaacaccgtgagcaccctgcaggccggcggcggcggc
ggcggcggcggcgcagcaggcaacagggagcgctgctgccggcactgctacgaccagcac
agcgcggtggtggagcgccacccgcaggagcaggacgccaacgcacccgacgcccccttc
ggcgccctgccacagccgggcgaccgggcggcagcaggaggggacgacggcgtctttgac
atcatcacagaggaggaagtgagcggcgtgtacgacagcgactcactctccttctccacc
gcctgctctcccggacacggccaggagggggcagcacagcttaggagcggtgccggtgct
gaagaccccccccccgccgccgccgtggtggtggagcccctgacggaggagcccgaggag
gccatggcccctgcagtgcaagacgccgaaatctgtctgctcaaggccggggaactcacg
ctctcggccccctacaccctggaggacatcgagggcttcggggacgcgtcccgggagctg
ttcgtccgctccagctgctacagcgtggtccccatcacggtgggccccgtggggccccag
gacgggcccaccgtcacctgggtgttcacctccgagcccaagagcatctccttcagcgtg
gtgtaccgcgaggaccccctcacacccccggaggacgccaaggtcctgatccccctgacc
cgctgcaactcccacaaggagaccatccagggggagctgaaggtccgcctccccggggag
tacaccctggtgttcgacaactccttctccaggttcatatccaagaaagtgctgtatcgc
ctgagtgtggccaagcctgtggtctacgatggaagcgactgcccgtga
DBGET
integrated database retrieval system
