Gadus morhua (Atlantic cod): 115550490
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Entry
115550490 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: centrosomal protein of 290 kDa-like
KO
K16533
centrosomal protein CEP290
Organism
gmh Gadus morhua (Atlantic cod)
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmh03036
]
115550490
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmh03037
]
115550490
Chromosome and associated proteins [BR:
gmh03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
115550490
Cilium and associated proteins [BR:
gmh03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
115550490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEP209_CC5
GBR2_CC
DUF4279
Motif
Other DBs
NCBI-GeneID:
115550490
NCBI-ProteinID:
XP_030221439
Ensembl:
ENSGMOG00000010306
LinkDB
All DBs
Position
9:4248732..4294781
Genome browser
AA seq
2449 aa
AA seq
DB search
MPAVLDWKRVMRADPETLPEGEETESDTLFDMLLMVDGHELKDNSPERMVQLFRVSQALL
KKKDRELVLAYDLIDKTGSEQAKTENDLLGKIGKLEQDLEMAQHSTNGRDTRFMRDELNQ
LENQLEQREKDFSQLQREMSKEKKTSEELAARAEEAEESSRKLRRELKKLKKKYEQVQQD
VDFYRRELEQKVAAGPVDKSQEAQRKLNTINREYCQCMDDLQRSEEDRAHLRTDNEQLRQ
DLMDSVREMEAMTDEYNKMKIVVQQTDGIMDQLRRERDHGNLQVRALTEQLQRQADEEDP
VMAAVNAKVEEWKRVLSAKDDEILEYQHMIRDLRDKLRSAQGDSDKTNIITLQQAVQERD
NQVKLLSEQMEQYTGEMERNARLIKDLKKPLKKGPSSAAHRLVEELEAKVAAAERSALEA
RRSGELAERDAADKDRELSETLTRVRLYESGTDGLEAAIAEIKEGKRQMRMKDRETEALA
REINGLTLRNNELQDENEAFRERLGLSPKEEVDLSEFLHAKSLRQRQYKAENQVLTKEIE
RLEEERLELKKQIRRMVTGRELGGSTTAELDQNDAGPSKLLLLDLQEGADKMKRKTEHLQ
KELSDKERDLEQHKTESNQLRVKLEEVSRVKSDLEATLTEVLTAMRASQELGAQVAVAAP
SLERLLRVMEGKGSPASGKPEAVSHLQAHLDQMTGRNQELRQELRLAREEASEALSGLAK
AQVKVTQLQSEAEVPKQSSSESPAFRPLTLPADLAPSSAEIISTLNEYAIRLLQEVKHKE
ESAEQLTAALEKYKSKVGVIFHRQGLLYKEHLSDKETWQKERETFAELKNKMEEQRDVDN
VRVQEFNNLLETLRKDPEELRRQLAETVRQVTVLRVNEKTLSRRYTLLMEQEQQLRKDNS
KLRVDSGHMQVAVTERMGYLQRYKEMAAYRITALQKALDESVPSADLERANKQYTELTVK
YRDMLQRDNHMVQRTSSLEHLEQENASLREQISELVKELESAKEKLNTLEQAWEHCSIVA
GDVRGVDKVSKALANREMASASRRITTLEMKELNERQRAEHAHKMCEHARNSLRHAEERN
AELEAKFAELTKLHLEAQRVERELRDQLAESVSRATSDADRARVAELEKAEAELRVEASR
LREVSDVAKMQVSVMEARQQSRDKETESFRRQVLDLQSQSDEKALLGRLHQQVVSLQLSE
AAALAXCEALTARLRALEAYQLRAEQRLDAGQRALYLARQDGRGRARHLRQTVHALRRQC
AGALPLVRLEQLSLTLAELQGERAGAQRERREAQEQRRXEGRAEELEGKLAGLEELVAAL
GDAKGAQKVMGWHRRAEEVRLQDMRRGRELETQREEILYLKGLGEGRERALRTLEEELVT
ERTLWEERQVSWEQREVDLERRLDAFETQQQQQVVPGASQQAEQQDLLPDPSWPVAQQLE
FALRKLGEHGRTILETQASCRALEERSKGSEEALRSAQQNVLSRDRVINELRLRLPATAG
RERLLADLGRAAAAAGEEEEGGAESQPALQVAHHTIGSLQGRLKQKEEVVKKYQELLARA
RREQEEVNRRHEEEVKALHQKLDLYSDSSLDRFKQNTLDLLKKPSLSVPTSKHLVRLAEV
EQTVVEQDHSLSALNERLRAAVADADRQRVSVATQAKKHQEEVSKLEEQHAGRVKALAGD
GEELRAQAAHTEKQLQYLQSELEAQKEANVRSPSNTMKSLVERLKAQLAQKEKQLKALGK
ALLELRSEMTGLAEQQIISGAAQREESLNVQTLVDKHTKELKLRLQELSKELQSAKESVR
GARGREEALKEEVEELRGDLQRNHKSQGRLQGEKEQRDHELQELRQRVKRLSSGLQNQQE
ADDRASTVENLQRKVRRLESELEKRPSSPERSANTTTNKEDNKSKEEVVRWEEGKKWQTR
MEKVRNGLKEKEGEVEALSRQLGTLKDLYARLEQENKGLLRKAKGRGVTADHVVGVRSAE
TEKELEELRRRNSELEKQILSIRSQQALPRDAAVDDLTQRNRWLEERLHTMESQMSKEPP
SRPSTSGRGTGTPSQKDQDIQKENLKLSSENLELRLQLAQANVELPGLKREVADLKEMCR
VVRKERAEAEKKLSHLRGAGTSGKTVGDLEKTVGLMKKVVERVQKENDALKRTSGTANQD
KLASLQQQHETLKTDYEKLKQEADTELNXRLESKTRGMEKIVMESERLRREIKREKEATE
RLRVTRSGLEVTIEKLESELEETRRKLHTALSRTIPEGADSKTWKASVVTRMYENKMKEL
EREGEKERAERTELKRKLKEAAEREEKALRAIHALEDQVKGGTRIDATTTKDVAALRRAN
EELEQERCKLMKELQELREGSGQTSTLQGSKELRNLLKASETEKKRLQGEVKKLSRALEN
FDPKFFDEIEDLKFNYNLEVKKNILLEEELRKVCTQFGVPANIPSVSIS
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgttcttgactggaagcgagtgatgagggcagaccctgagactcttccggag
ggggaagaaacagagtcagacacgctcttcgatatgctgttgatggtggatggccacgag
ctgaaggacaactccccagagcggatggtccagctctttagagtatctcaggccctgcta
aagaagaaggacagagaacttgtgcttgcttacgatctcatcgacaaaaccggttcagaa
caagctaagactgaaaatgacttgcttggcaagattgggaagttggaacaggaccttgag
atggcccaacactcaaccaacggcagggatacccgcttcatgcgagacgagcttaatcag
ctggagaaccagttggagcagcgggagaaggacttctctcagctgcagagggagatgagc
aaggaaaagaagaccagcgaggagctggcggcgcgggcagaagaggcggaggagagctcg
aggaagctccgcagagagctgaagaagcttaagaagaagtacgagcaggtccagcaagat
gtggacttctaccgcagggagctggagcagaaggtggcggcgggccccgttgacaagagc
caggaggcccagcgcaaactcaacacaattaaccgggagtactgccagtgcatggacgac
ctgcagcgttcggaggaagacagggcccacctgcgcacggacaacgagcagctgcggcag
gacttgatggactcggtgagggagatggaggccatgacagacgagtacaacaagatgaag
atcgtggtgcagcagacggacggcatcatggaccagctgaggagggagcgggaccacggc
aacctgcaggttcgcgcgctgacggagcagctccagcggcaggcggacgaggaagacccc
gtcatggccgccgtcaacgccaaagtggaggagtggaagagagtgctctctgcgaaggat
gacgagatcctggagtaccagcacatgatccgagacctgcgggacaagcttcggtcggcc
cagggcgactcggacaagaccaacatcatcaccctgcaacaggccgtgcaggagagggac
aaccaggtgaagctgctgagtgaacaaatggagcagtacaccggagagatggagaggaac
gcccggctcatcaaggacctcaagaagccgctgaagaaaggcccgtcctcggccgcccac
cgcctggtggaggagctggaggccaaggtggcggcggcggagcgaagcgccctggaggcc
aggcgcagcggcgagctggccgagcgcgacgccgccgacaaggaccgcgagctgagcgag
acgctgacccgcgtccggctctacgagtctgggaccgacggactggaagcagccatcgcg
gagatcaaagagggcaagcgccagatgagaatgaaagaccgtgagacggaggctctcgcg
cgggaaattaacggcctgacgctcaggaacaacgagctccaggacgaaaacgaggcgttc
agagaacggctaggtctgagccccaaggaggaagtggatctctctgagttccttcacgcc
aagagcctccgacagcggcagtacaaagctgagaaccaggtcctcaccaaagagatcgag
cgacttgaagaggagcggctggagctgaagaagcagatccgtcgcatggtgacgggccga
gagctggggggatccaccaccgccgagctggaccagaacgacgcggggccgagtaaactg
ctgctccttgacctccaggagggcgcagacaagatgaaacggaagactgaacacttgcag
aaggagctgagtgacaaggagagagatcttgagcaacacaagaccgagtccaaccagctc
agagtcaaattggaggaggtgtccagggtcaagagcgacctagaggccacgctgacagaa
gtcctcacagccatgagggccagtcaagagctgggggctcaggttgctgtcgccgccccc
tccctggagagactgctcagagtcatggagggcaagggttcacccgcctctgggaagccc
gaggcggtctcccacctccaggcccatctggaccagatgacgggccggaaccaggagctc
aggcaggagctgcgcctggcccgggaggaggccagcgaggcactcagtgggctggccaag
gctcaagtaaaggtgactcaactgcagtccgaggcggaggtcccgaagcaatcctctagc
gagtccccggcgttccgacctttgaccctgcctgcggatttggctccctcgagtgcggag
ataatcagcaccctgaacgaatacgccattcgcctcctccaggaggttaaacacaaagaa
gagtcagccgaacagctcacggccgctctggagaagtacaaaagcaaagtgggggttatc
ttccaccggcagggtctgctgtacaaagagcatctcagtgacaaggagacgtggcagaaa
gagagggaaacgtttgcagagctgaagaacaagatggaggagcagagggatgtggataac
gtgagggtccaggaattcaacaacctgctggagacgctacggaaagatccggaagagttg
cggcggcagttggcggagacggtgaggcaggtgacggtgctgcgggtgaacgagaagaca
ctgtcgcggcgctacaccctcctcatggagcaggagcagcaactccgcaaggataacagc
aagctgagggtcgacagcgggcacatgcaggtcgccgtcaccgagaggatgggctacctg
cagagatacaaggaaatggcagcgtacaggatcacagccctgcagaaggctttggatgag
agcgttccttccgccgacctcgagcgggccaacaagcagtatacggagttaaccgtcaaa
taccgagacatgctgcagagagacaaccacatggtgcagaggacatccagtctggaacat
ctggagcaggagaacgcctcgctccgggagcagatctctgagctggtgaaggagctggag
agcgccaaggagaagctcaacaccctggagcaggcctgggagcactgcagcatcgtggca
ggtgacgtcaggggcgtggacaaggtgagcaaagcactggccaaccgcgagatggcgtcc
gcatccagacgcatcaccacgctggaaatgaaggagctgaatgagcggcagagggccgaa
cacgcgcacaagatgtgcgagcatgccaggaattccctccggcacgcagaagagcgcaac
gcagagctggaggccaagtttgcagagctgaccaagctgcacctggaggcccagcgcgtg
gagcgggagctgagggaccagctggcggagagcgtgagccgggccaccagcgacgccgac
cgcgcccgcgtggcagagctggagaaggcggaggcggagctccgcgtggaggcctccagg
ctccgagaggtgtctgacgtggccaagatgcaggtgtctgtgatggaggcccggcagcag
tccagggataaggagacagagtccttcaggaggcaggttctggaccttcagtcccagtcg
gacgagaaggccctcctgggccggctccaccagcaggtggtgtcgctgcagctcagcgag
gcggcggccctggccnngtgcgaggccctgacggcccgcctgcgcgccctggaggcctac
cagctccgggccgagcagcgcctggacgccggccagcgcgccctctacctggcccggcag
gacggccgcggccgcgcccgccacctgcggcagacggtgcacgcgctgcggcggcagtgt
gccggcgccctgcccctggtccggctggagcagctctccctgacgctggcggagctgcag
ggggagcgcgccggggcgcagcgggagaggagggaggcgcaggagcagcggaggncggag
ggccgggcggaggagctggaggggaagctggccggtctggaggagttggtcgccgcgctg
ggggacgccaagggagcgcagaaggtgatggggtggcaccggcgggcggaggaggtgcgc
ctgcaggacatgcgccgcggcagggagctggagacgcagagggaggagatcctctacctg
aagggcctgggagagggccgtgagcgcgccctgcgcaccctggaggaggagctggtgacg
gagcgcacgctctgggaagagcggcaggtttcttgggagcagcgggaggtggacctggag
cgccggctggacgccttcgagacgcagcagcagcagcaggtggtcccgggagcctcccaa
caggctgagcagcaggacttgctaccagaccccagctggccggtggctcagcagctggag
ttcgccctgaggaaactgggggaacacggccgcaccatcctggagacgcaggcctcgtgc
agagctctggaggagaggtccaaggggagcgaggaggcactgcgcagcgcccagcagaac
gtgctctccagggaccgggtcatcaacgagctcaggctccgcctccccgccaccgccggc
cgggagaggctgctggccgacctgggccgggcggcggcggcggcgggggaggaggaggag
ggcggggcggagagccagccggccctccaggtggcgcaccacaccatcgggagcctgcag
gggcggctgaagcagaaggaggaggtggtgaagaagtaccaggagctgctggcccgagcc
agacgggagcaggaggaggtgaacaggaggcatgaggaggaggtgaaggctctgcatcag
aagctggacctctactcggacagctcactggaccgcttcaaacagaacacactggacctg
ctgaagaagccgtccctcagcgtgcccacctccaagcacctggtgcggctggcggaggtg
gagcagacggtggtggagcaggaccactccctctccgccctcaacgagaggctgagggcg
gccgtcgccgacgccgaccgacagagggtttccgtggcgacgcaggccaagaaacaccag
gaggaagtgtcaaagctggaggagcagcacgcgggcagggtgaaggcgctggccggggac
ggtgaggagctgagggcccaggccgcccacacagagaagcagctgcagtacctccagagc
gagctggaggcccagaaggaggccaacgtccgctcgcccagcaacaccatgaagagcctg
gtggagcgtctcaaggcccagctcgcccagaaagagaagcagctcaaggccctgggcaag
gcgctgctagagctgcggtcggagatgacgggcctggcggagcagcagatcatctcgggc
gcggcgcagagagaggagagcctcaacgtccagacgctggtggacaagcacaccaaggag
ctgaagctgcgactgcaggagctgagcaaggagctgcagtctgcgaaggagtcggtcagg
ggggcccgcggccgcgaagaggccctgaaggaggaggtggaggagctgaggggcgacctg
cagcggaaccacaagagccagggtcggctgcagggggagaaggagcagagagaccacgag
ctccaggaactccggcagcgcgtcaagaggctgagcagcgggctacagaaccaacaggag
gctgacgaccgggcctccacggtggagaacctccagaggaaggtcaggaggttggagtcg
gagctggagaagaggccgtcgtccccagagaggagcgccaacaccaccaccaacaaggag
gacaacaagtccaaggaagaggttgtgcgctgggaagaggggaagaaatggcagacgagg
atggagaaagtacggaacggactcaaggagaaagagggggaggtggaggctctttccaga
cagctcggcactctcaaagacctctacgccagactggagcaggagaacaagggcctgctg
aggaaggccaaggggcgcggtgtgaccgccgaccacgtggtgggcgtgcggagtgccgag
acggagaaggagctggaggagctgaggaggaggaacagcgagctggagaagcagatcctc
agcatcaggagccagcaggccctgcccagggacgcagctgtggatgacctcacccagagg
aaccgctggctggaggagagacttcacaccatggagtcccagatgtccaaggagcctcct
tccaggccttctacgtccgggcggggcacaggcacgccatcgcagaaagaccaggatatc
cagaaagaaaacctgaagctctcctcggaaaacctggagctccgccttcagttggcacaa
gctaatgttgagctgcctggtctaaagcgagaagtcgcagacctcaaagagatgtgccga
gtcgtgaggaaggaaagagccgaggcagagaagaagctgtcccacttgcgtggggcgggc
accagcggtaagacggtgggcgacctggagaagacggtggggctgatgaagaaggtggtg
gagagggtgcagaaggagaacgacgccctcaagagaacctccggaacggccaatcaggac
aagctcgcgtctctgcagcagcagcacgagaccctcaagacggactatgaaaagctgaag
caggaggcggacaccgaactgaacngcagactggaatccaaaaccagagggatggaaaag
atagtgatggagagcgaacggctacggagagagattaaaagggaaaaggaagcgacagag
aggctgcgagtgaccaggagcggcctagaagtgaccatcgagaagctggagtcagagctg
gaggagaccaggcgcaaactacacaccgctctgtcaagaaccatccccgagggagccgac
agcaagacctggaaggcctcagtggtgacgaggatgtatgaaaacaagatgaaagagctg
gagagggaaggagagaaggagcgggccgagcgcaccgagctcaagaggaaactgaaggag
gcggccgagcgagaggagaaagccctgcgcgccatccacgcacttgaggatcaggtgaaa
ggcggcaccaggattgacgcaactacaaccaaagatgtggcagcgctaaggcgggctaac
gaggagctggaacaggagcggtgtaagctgatgaaggagctgcaggagctccgggagggg
tccggacaaacgtccactcttcaaggctccaaggagctgaggaaccttctgaaagcatca
gagaccgagaagaaacgtttacaaggggaggtgaagaagctgagtcgagccctggagaac
tttgacccaaagtttttcgatgagattgaagacctgaagttcaactacaatttggaggtg
aagaagaacattctgctggaagaagagctgaggaaggtttgcacgcagtttggcgtgcca
gctaatattcccagtgtgtcaatcagctaa
DBGET
integrated database retrieval system
