Gadus morhua (Atlantic cod): 115550748
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Entry
115550748 CDS
T10832
Name
(RefSeq) LOW QUALITY PROTEIN: filamin-C-like
KO
K27393
filamin-C
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115550748
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmh04812
]
115550748
Cytoskeleton proteins [BR:
gmh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115550748
Intermediate filaments
Intermediate filament-binding proteins
115550748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
CH
Ig_GEX2_N
Big_3_5
CFSR
Motif
Other DBs
NCBI-GeneID:
115550748
NCBI-ProteinID:
XP_030221894
Ensembl:
ENSGMOG00000018206
LinkDB
All DBs
Position
9:complement(3662375..3718979)
Genome browser
AA seq
1627 aa
AA seq
DB search
MMSNNYDDQLPPQYSQEFGDEEDDEMPATEKDLAEDAPWKKIQQNTFTRWCNEHLKCVSK
NINDLQRDFGDGLKLISLLEVLSQKKCTESITSGPNFRQMKLENVSVALEFLDREHIKLV
SIDSKAIVDGNLKLILGMIWTLILHYSISMPMWEDEEDEDAKKLTPKQRLLGWIQNKVPQ
LPIKNFHRDWNDGKALGALVDNCAPGLCPGWXDWDPNQPXENAREAMQQADDWLGVPQVI
APEEIVDPNVDELSVMTYLSQFPKAKLKPGAPLKNKQLFPDKAKASDPVGIEPHGNTVLQ
PAVFTVDTQEAGSGEVLVYVEDPEGYKEEAKVKPVKNKSGTYTVTYTPKVEGVHRVKVLF
AGQDIDKSPYTVNVTKTMGDASKVHARGPGLDATGNVANKPTYFDIYTAGAGNGDVSVVV
IDPQGKKDTVELVLENKGDSVFRCTYRPVLQGPHVIHVLFAGQEIPKSPFTVNIAEAPPV
APPPGVPVKIIPSVSVRPSSGAKGGKGPLAPKAGRPTMNPSICRATGRGLQPKGVRMKEV
ADFRVFTKGAGPGELQVSVKGPGDTEEKVNVREVGDGVYECDYVPLKPGKYTVTITWGGQ
PIPRSPFVVEVAXEAGFQKVRAWGPGLKTGHGRQIGDFVVEAIGTEVGNSGFSIEGPSQA
KIECDDRGDGSCDVRYWPTEAGDYAVHVICDDEDIKDSPFMAHILPAANDVFPEKVKAFX
PGLRPTGVVVNKPTEFTIDARMAGKGHLKIYAQDAQGCTIDIQINEKGDGTFLCVYTPSK
PIKHTIIVSWGDVNVPNSPFRVLVGEGCHPDKVKVYGPGVEKSGLKANEPTYFTVDCGDA
GQGDISIGIKCAPGVVGPAEADIDFDIIKNDNDTFTVKYTPPGAGRYTIMVLFADQEIPV
SPFKVKVDPSHDAGKVRAEGPGLNKTGVEVGAPTHFTIYTKGAGKARPEVHFAVSGAGEA
VRDFEIIDNHDYSFTVKYTALQQGNMAISVTHGGDPIPKGPFHISVAPALDLSKIKVEGL
DTKVEVGKDQEFTVNSQGAGGQGNVGVKMTSPSGRPIPCKTESDKAGGTHGVKYIPPEEG
QYKVEVSYDGHPVAGSPFGVEGVMPGDPSKVRAYGPGLKGGIVGKPAFFTIDTLGAGAGG
LGLAVEGPCEAKLECRDNGDGTCSVTYLPPVVGEYDINILFAEQHVPGSPFKAAVRPAFD
PAKVTAYGPGLERARAGEQASFTVDCSRAGEAELTIEIVSESGAKAEVRVQKTAEGTFSV
SYTPPFHGAHTITVKYGGGVIPQCPKVIQVEPAVDTSGVKVYGPGVEPRGVLREVTTHFI
VDTRALSKXGRRPHQVHVINPSGGSTETFVTDKGTXTYRVEYTAFEDGMHLIEVLYDDVA
VPKSPFRVSVVEGCDPTRVRAYGPGLEGGVTNKANCFTVETRGAGTGGLGLTVEGASESK
MSCKDNKDGSCSVEYVPFTAGDYDVNITYGGHPIPGSPFRVPVRDPVDPTKVKCSGPGLG
SGVRAHVPQSFTVDCTKAGQAPLDVKLYGPTGTAEPVGVKNNGDGTHTVHYTPGQDGPHR
NATEEPTRACESPGGLKTITTPTSLHSADSVEALWSDRAEVQGPAATHLLMSNANAPPVI
GTARIED
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcaataactacgacgaccaactgcctccacagtatagccaggagtttggggac
gaagaggacgacgagatgccggccacggagaaggacctcgcggaagacgcgccgtggaag
aagatccagcagaacactttcaccaggtggtgcaacgagcacctaaagtgcgtcagcaag
aacatcaacgacctccagcgggattttggcgatggcttgaaactaatttccctcctggag
gtcctgagtcagaagaaatgtacagaaagcatcacatcaggacctaactttcgacaaatg
aaactggaaaatgtttcagtggcacttgagttcctggacagggaacatatcaaactggta
tcaatcgacagcaaagccatcgtggacgggaacctgaagctgatcctcggcatgatctgg
acgctcatcctgcactactccatctccatgcccatgtgggaggacgaggaggacgaggac
gccaagaagctgacccccaagcagcgtctgctgggctggatccagaacaaggtgccccag
ttacccatcaaaaacttccaccgcgactggaacgacggcaaggccctgggcgccctggtg
gacaactgcgctcccggtctgtgtcctggctggngcgactgggaccctaaccagccantg
gagaacgcccgggaggccatgcagcaggctgatgactggctcggtgtgccgcaggtgatc
gctccagaggagatcgtggacccgaatgtggatgagctctcagtcatgacctacctctcc
cagttccccaaggctaagctgaagcctggagctcccctgaagaacaagcaactgttccca
gacaaggccaaggcttcggacccggtgggtattgagccccatggcaacactgtgctgcag
ccagctgtgttcaccgtggacacacaggaagcaggaagtggggaggtcctggtgtacgtt
gaggatcccgagggctacaaggaagaggcgaaggtgaagcccgtcaagaacaagagcgga
acctacaccgtcacctacacacccaaggtggagggggtccacagggtgaaagttttgttt
gcggggcaggacattgacaagagcccgtacacagtgaacgtgacgaagaccatgggcgat
gccagcaaggtccacgcaagagggcccggcctggacgccacgggcaacgtggccaacaaa
ccaacctactttgacatctacacagctggcgccggcaacggggacgtgagcgtggtcgtc
atcgacccccagggcaagaaagacacggtggagctcgtcctggagaacaagggcgacagc
gtcttccgttgcacctaccggcccgtgctgcagggcccgcacgtcatccacgtgctcttc
gccggccaggagatccccaagagcccgttcactgtgaacatcgcagaagctccgcccgtg
gctcctccccccggagtgcccgtgaaaataatcccctcagtcagtgtgcgcccctcctcc
ggcgcaaagggcggcaaggggcctctcgcccccaaggcgggtcgaccaacgatgaacccc
agcatctgcagagccacaggccggggccttcagcctaaaggggtccggatgaaggaggtg
gcggacttccgtgtgttcaccaagggagcaggccctggggagctacaggtctcagtcaaa
ggaccgggagacaccgaggagaaagtgaacgtgcgggaagtgggagacggagtgtatgaa
tgcgattatgtccccctgaagccgggtaaatacaccgtcaccatcacctggggggggcag
cccatcccacgcagtccgttcgtggtggaggtggctntggaagccggcttccagaaggtc
cgggcttgggggccgggcctgaagaccggccatggtcggcaaatcggcgactttgtggtc
gaggccatcggcacggaggtggggaattcaggtttctccatcgaggggccgtcccaggcc
aagatcgaatgcgacgaccgcggcgacggctcctgcgacgtgcgctactggcccacggag
gccggcgactatgccgtgcacgtcatctgcgacgacgaggacatcaaggacagccccttc
atggcccacatcctccccgccgccaacgacgtcttccctgagaaagtgaaggccttcnga
cctggtcttcggccgaccggcgtcgtcgtgaataaaccgacagagttcaccatcgatgcg
cgcatggcagggaagggccacctcaaaatctacgcacaggatgcgcagggctgcactatc
gacatccagatcaatgagaagggcgatgggaccttcctctgcgtgtacacgccgagcaag
cccatcaaacacaccatcatcgtcagctggggcgatgtcaacgtgcccaacagccccttc
agggttctagtgggggagggctgtcacccagacaaggtcaaggtgtacgggccgggcgtg
gagaagagcggcctgaaggccaacgagccgacctacttcaccgtcgactgcggcgacgcc
ggccaaggggatatcagcattgggatcaagtgcgccccgggagtggtcggtcctgccgag
gccgacatcgactttgacataatcaagaacgacaatgacaccttcactgtcaagtacact
ccgcccggggctggccgctacaccataatggtgctgtttgctgaccaggaaatccctgtg
agtccgttcaaagtcaaggtcgatccttcccatgacgcgggcaaggtgcgggcggaagga
cccggccttaacaagacaggagtggaggtgggcgcgccgacacacttcaccatctacacc
aagggagcgggaaaggccaggccagaggtgcactttgctgtctctggcgccggagaggcc
gtgcgggactttgagatcatcgacaaccacgactactccttcacggtcaagtacaccgct
ctgcagcagggcaacatggcgatttctgtgacccacggaggggaccctatccccaagggc
cccttccacatctccgtggcccctgccctggacctcagcaagatcaaagttgaaggactt
gatacgaaagtggaggtcgggaaggaccaggagttcaccgtcaactcccagggggccggc
ggccaggggaacgtcggcgtgaagatgacctcgccctcgggccgacccatcccatgcaag
acggagtcggacaaggccggcggcacgcacggcgtcaagtacatcccccccgaggagggc
cagtacaaggtggaggtcagctacgacggacacccggtggcgggaagccccttcggcgtg
gagggcgtgatgcctggggacccttccaaggtacgcgcctacggcccgggtctgaagggc
ggcattgtgggtaaaccggccttcttcaccatcgacaccctgggggccggcgccgggggc
ctgggcctggccgtcgaggggccctgcgaggccaagctcgagtgccgtgacaacggggac
ggcacgtgctccgtgacctacctgccccccgtggtgggcgagtacgacatcaacatcctg
ttcgccgagcagcacgtccccggctcccccttcaaggcggcggtgcggcctgccttcgac
cccgccaaggtgacggcctacgggcccggcctggagcgggcgcgggccggggagcaggcc
tccttcaccgtggactgctcccgcgccggggaggcggagctcaccatcgagatcgtgtcg
gagagcggcgccaaggcggaggtccgcgtccagaagacggcggagggcacgttctccgtc
agctacacgccgcccttccacggcgcccacaccatcaccgtcaagtacggcggcggcgtc
atcccccagtgccccaaggtgatccaggtggagcccgccgtggacaccagcggggtgaag
gtgtacggcccaggggtggagcccagaggcgtgctgcgtgaggtcaccacccacttcatc
gtggacacgcgcgccctcagcaagnncgggcggcggccgcatcaggtgcacgtcatcaac
ccgtccggcggcagcacggagaccttcgtcaccgataaggggacgnngacctaccgcgtg
gagtacacggccttcgaggacggtatgcatctgatcgaggtgctgtacgatgacgtggcc
gtgcccaagagccccttcagggtgtcggtggtggagggctgcgacccgacccgggtgagg
gcctacggcccgggactggagggaggcgtcaccaacaaggccaactgcttcacggtggag
accaggggtgccggtactggcggcctgggcctcaccgtggagggggcctcggagtccaag
atgtcctgcaaggacaacaaggacggcagctgcagcgttgagtacgtccccttcaccgcc
ggggactacgacgtcaacatcacctacgggggccaccccatccccggcagccccttccgg
gtgcccgtgcgagaccctgtggaccccaccaaggtcaagtgctcgggccccggcctgggc
agtggcgtgagggcccacgtcccccagagcttcacggtggactgcaccaaggccggccag
gcgcccctcgacgtcaagctctacgggccgacaggcaccgctgagcccgtgggcgtcaag
aacaacggcgatgggactcacaccgtccattacacccccggccaggacggcccccacagg
aacgctacagaagaacccaccagagcgtgtgaaagcccagggggcctgaagacaattact
acccccacctctctgcacagcgccgacagcgtggaggcgttgtggagcgatcgggcggag
gtgcagggccctgcggccacgcacctattgatgagcaacgcaaacgcccccccggtgatc
ggcacggcccgcatagaggactaa
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