Gadus morhua (Atlantic cod): 115551029
Help
Entry
115551029 CDS
T10832
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115551029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmh03400
]
115551029
Enzymes [BR:
gmh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
115551029
DNA repair and recombination proteins [BR:
gmh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115551029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Ribosomal_L19e
Motif
Other DBs
NCBI-GeneID:
115551029
NCBI-ProteinID:
XP_030222380
Ensembl:
ENSGMOG00000019080
LinkDB
All DBs
Position
9:13860085..13867431
Genome browser
AA seq
499 aa
AA seq
DB search
MEEKLYGSLPVPSEYLQQWIQSTQQFQALQAQYSGFSPHHHPHYPEVPAGEQATAHMASH
PEPMMGQQEPANPAKPPAKKRGRPAQPKEPKEPKPPKIPKAPKPPKPPKAPKVPKAPKDP
AAPKAKPGPKSKKAKEGEADGKQEKIDDSFKKVKRKRDRFKGMSEEEVMTKTLPDLLEYN
LDYVIIGINPGLLAAFIGRWFPGPGNHFWKCLFLSGFTDELLNHTADTILPTKYKIGFTN
MVARATPGSKDLSSTELREGGKILTQKLIKYKPLIAVFNGKCIYEMFCREMFGKKPKTLT
FGLQPHKIPDCDVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDELKGIQKSKEIEEV
KYSFDLGLAKEDAKRMAIKEEAYDPGYEDAYGGAYVEGGPEGGPPPPPGEPQTNGHCNFS
AAENTEAAEKATTSQAAGGAEGQLPDGQWMTQSFADQIPDIGAAAAAAAAAAATAAAAAA
AAEAAVAATTTGPTTEPTA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaagctgtatggatcactgcctgtcccctcggaataccttcaacagtggatt
cagtcgacccagcagttccaggcgctccaggcccagtactccgggttcagtccgcaccac
cacccccactatccagaagtgccggcgggagagcaggcgacggcacacatggcttctcac
ccggaacccatgatgggtcagcaggagcccgccaacccagcaaaacctccagccaaaaag
agaggccgaccagcacaacccaaggagcccaaggagcctaaaccccccaaaatcccaaag
gcgcccaagcctccgaagccccccaaggcgcccaaagtaccgaaagcccccaaggacccc
gccgccccaaaggccaagccgggtcccaagtccaagaaggccaaggagggcgaggcggac
ggcaagcaggagaaaatagacgatagcttcaagaaggtcaagaggaaaagggaccgtttc
aagggaatgagcgaggaagaggtcatgacaaaaaccctgccagacctgctcgaatacaac
ctggactacgttattattggcataaacccgggtttattggctgcctttattggacgctgg
ttccccggtcccggaaaccacttctggaagtgcctgttcctgtctggattcacagatgag
ctgctcaaccacacggccgacacaatactgcccactaagtacaagatcggcttcaccaac
atggtggccagggccacacctgggagcaaagatctctccagcacggagttacgcgaagga
ggcaaaattctcacacagaaattaataaagtacaagcctctcattgcagttttcaacgga
aaatgcatatatgaaatgttctgcagagagatgtttggcaagaaaccaaagacactcacg
tttggtttgcagcctcacaagattcctgactgtgatgtggccctgtatctgatgccttcg
tccagtgctcgctgtgcccagttcccccgtgcccaggacaaagtccacttctacattaag
ctgagggagctgagggacgagctgaagggaatccagaagtcgaaagaaatcgaggaggtc
aaatacagctttgacctgggactggctaaggaggatgccaagaggatggccataaaggag
gaggcgtacgaccccggctacgaggacgcctacgggggggcatacgttgaaggaggacct
gaaggaggcccaccaccccccccgggcgagccccagaccaacggccactgcaacttctca
gcggctgaaaacacagaagctgcagagaaggccaccacgtcccaagcggcgggcggggca
gaaggccagctcccagacggacagtggatgacccagtcgtttgccgaccagatccctgac
atcggggcggcggcggcggcggcggcggcggcggcggcaactgctgctgctgcagccgca
gcagcagaagcagcagtggcggcgacgacgactggccctacgacagagccaacagcttag
DBGET
integrated database retrieval system
