Gadus morhua (Atlantic cod): 115551161
Help
Entry
115551161 CDS
T10832
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04010
MAPK signaling pathway
gmh04260
Cardiac muscle contraction
gmh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115551161
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115551161
04261 Adrenergic signaling in cardiomyocytes
115551161
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmh04040
]
115551161
Ion channels [BR:
gmh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115551161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_2
MCP-like_PDC_1
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
115551161
NCBI-ProteinID:
XP_030222580
Ensembl:
ENSGMOG00000019325
LinkDB
All DBs
Position
9:complement(1187625..1248566)
Genome browser
AA seq
1122 aa
AA seq
DB search
MNTCRRISFWMVLILLSCQDISLASQFPTQLMIKDWVDQMQRELVSLADTASAGKSLTQI
FLANQNLYTVEQNDAEELVARAARNIEQLLGKRSTALEKLATAAEILQMEHQWKDEFEDG
EIAYYNAKDNLDVNETQGRKNRIRPEFRQDSSFKRLTDHNHTAVHIPTDIYDGSTIVLNE
LYWTEALADVFKRNREDDPTLLWQVFGSATGLARYFPASPWMDVRKTPSKIDLYDVRRRP
WYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVIEMLDTLSDDDYVNVVYFNTRVNISG
CFDHLVQANVRNKKLLKDAVQNIKAKGITNYTKGFEFAFEQLSVTNVSRANCNNIIMLFT
DGGEERAQAILEKYNTDKKVRVFTFSVGQHNYDKGPIQWMACANKGYFYEIPSIGAIRIN
TQEYLDVLGRPMVRAGQQAKQVQWTNVYLDALELGLVITGTLPVFNRTRIRDDTNGETQN
QLILGVMGIDVSLNDIKKLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKKRIRQRQLRLS
NMYAASFHEEPVTLDLMDAELENDVKVEIRRMMIDGEIGEQTIETLVKTQDERYIDRGVR
TYTWGPVNGTDYSLALVLPKYSEHFIQAKLGNDIEEAKSVGTMQLDTFEEYGHTFIAPRE
YCKELKVSDNNTHFLIDFNEFIESDAPKACNVSLVNRLILDAGLTAELVKVWKEQALEGI
MARFVATDGGITRVYPNSAGEDWNENPETYESSFYKRTLDNEIYIFTAPYFNRSRESGYE
SGILVSKAVDLTLHQVELKPAVVGVKLNVTSWMNTFISATLKVNCKDEICGCLKNDKHVD
CVILDDGGFLLMSNQEEYITQIGQFFGEIDPVLMINLVNTSLYSFNKTYDYQSVCDPEKD
SKTAAGPRSVYVPTVADLLSVGWWASTAAWSILQQLLYSLTLPNLLDAVESAEEEVPDAM
FKESCITEQTQYFFDNDERSYAGLLDCGNCSRMYRAEKLPNTNLVFLITDAKATCLSCDP
RPLRQAEQPSEGPDLCELARNPRYRKGPDVCFDNDENDEPLCPISRGRGLRVSPLLLWLA
LCSGSVHPLPPSAPLGCRYQPAGIAMVVHCFLQKHIQCQPTI
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgtgcagaaggatttcgttctggatggtcttgatcctgctctcgtgccaagac
atttccctggcatcgcaatttcctacacagctcatgattaaagattgggtggatcagatg
cagcgagagctggtcagcctggccgacaccgcgagcgctggcaagagcctcacacagatc
tttttggcaaaccaaaacctgtacactgtggagcagaacgacgcagaggagctggtggcc
agagcggccaggaacatcgaacagctgctggggaagaggtccacagccctggagaaactg
gccactgcagcagagatcctgcagatggagcaccagtggaaagatgagtttgaggatggg
gagattgcctactacaacgcgaaggataacctggacgtgaacgaaacccaaggcaggaag
aaccggatccgtccggagttcaggcaggactcctcctttaaacgcctgaccgatcacaac
cacactgccgtgcacatccccacggacatctacgatggctccaccatcgtgctgaatgag
ctgtactggaccgaggcgctggccgacgtcttcaagaggaaccgggaggatgaccccacc
ctcctctggcaggtgtttggcagcgccacgggattggctcgctacttcccagcttcaccg
tggatggacgtgcgcaagacccccagtaagatcgacctgtacgacgtgcgccggagacca
tggtacatccaaggtgctgcctcgcccaaagacatgctgatcctggtggatgcgagcggc
agcgtttcgggcctgacgctgaagctcatccggacctctgtgatcgagatgctggacacc
ctgtccgacgacgactacgtcaacgtggtctacttcaacaccagggtgaatatttcgggc
tgcttcgaccatctggtccaggccaacgtcaggaacaagaagctgctgaaggacgccgtc
cagaacatcaaagccaagggcatcaccaactacaccaaaggatttgagtttgctttcgag
caactctccgtgacaaacgtcagcagagccaactgcaacaacatcatcatgctgtttacg
gacgggggagaagagagagctcaggccatcctggagaaatacaacactgacaagaaagtg
agggtgttcaccttctctgtgggccagcacaactacgacaaaggacccatccagtggatg
gcctgcgccaataaaggatacttttacgagattccctccatcggcgccatccgaataaac
acgcaggagtatctggatgtgcttgggcgacccatggtgcgggccggtcagcaggccaag
caggtccaatggaccaacgtgtacctggacgccctggaactggggctggtcattacaggc
acactgccggtgttcaacaggaccaggatcagagatgatacaaatggagagacccagaac
caattgattcttggggtgatggggatcgatgtgtcgctgaatgacatcaagaaactaaca
ccacgatttactatcgggccaaacggatactactttgccattgacccaaacggctacgtc
ctgctgcatcccaaccttcagcccaagaagcggatccgtcaaaggcagctcagactcagt
aatatgtacgctgccagcttccatgaggagcctgtgacccttgacctaatggatgctgag
ctggagaatgacgttaaagttgagatcaggagaatgatgatagacggcgagataggagag
cagaccattgagaccttagtgaagacccaggatgagcggtacatagacagaggtgtgcgg
acctacacctggggaccggtaaacggaacagattacagccttgcccttgtcctgcctaaa
tacagtgaacactttattcaagccaagctggggaacgacatagaggaagccaaatctgtg
ggaacaatgcaactggacacgtttgaagagtatggacacaccttcattgctcccagggag
tactgcaaagagctgaaagtttcggacaacaacacacacttcctcatcgacttcaatgag
ttcattgaaagtgacgctcccaaagcctgcaacgtgtccttggtgaacaggctcatcctg
gacgcgggactcacagcagagctggtcaaggtgtggaaggagcaggcgcttgaagggatc
atggcccggtttgtagccacagacggggggatcaccagagtctatcctaacagtgctgga
gaagactggaatgagaatcctgaaacatacgagtccagcttttacaagagaaccctggac
aatgagatatacattttcactgcaccgtatttcaataggagcagagagtctggctacgag
tcaggcattctggtcagcaaggcagtggatctcacccttcatcaggttgagctcaaaccc
gcagtggtgggagtcaaactgaatgttacatcctggatgaacactttcatcagtgctacg
ttaaaagtcaactgtaaggatgaaatctgtggctgtctgaagaatgataagcatgtggac
tgtgtgatcctggacgacggaggcttcctcctcatgtccaaccaggaagagtacatcacg
cagataggtcagttctttggggaaattgaccccgtgctgatgatcaacctcgtgaacaca
tctctctactccttcaacaagacgtatgactaccagtctgtctgtgacccggagaaggac
agcaagacagcagcaggcccacgaagcgtctacgtgccgactgttgctgacctgctcagt
gtcggctggtgggcctccactgctgcttggtccatcctgcagcagctgctctacagcctc
acgctgcctaacttgctggacgccgtggagtcggcagaagaggaggtcccagacgccatg
ttcaaggagagctgtatcaccgagcagacgcagtacttcttcgataacgacgagagatcc
tacgcagggctgctggactgcgggaactgctccaggatgtaccgcgccgagaagcttccc
aacaccaacctggtgttcctgatcaccgacgccaaggccacgtgtttgtcatgtgacccc
cggccactacggcaagccgagcagccctccgagggccctgatctgtgcgagctggcccgg
aaccccaggtacaggaaggggcccgacgtgtgcttcgacaacgatgaaaacgatgagccc
ttgtgcccaatcagccgaggccgtggcctaagggtctcccccctgctgctgtggctggca
ctgtgctcagggtcagtgcaccccctccctccttcagcaccactggggtgcagataccag
ccagcaggcatagccatggtcgttcactgctttttacagaagcacattcaatgccagcca
acgatttaa
DBGET
integrated database retrieval system
