Gadus morhua (Atlantic cod): 115552033
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Entry
115552033 CDS
T10832
Symbol
xiap
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
gmh Gadus morhua (Atlantic cod)
Pathway
gmh04120
Ubiquitin mediated proteolysis
gmh04210
Apoptosis
gmh04217
Necroptosis
gmh04510
Focal adhesion
gmh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115552033 (xiap)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115552033 (xiap)
04217 Necroptosis
115552033 (xiap)
09144 Cellular community - eukaryotes
04510 Focal adhesion
115552033 (xiap)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115552033 (xiap)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmh01002
]
115552033 (xiap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmh04121
]
115552033 (xiap)
03029 Mitochondrial biogenesis [BR:
gmh03029
]
115552033 (xiap)
Enzymes [BR:
gmh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115552033 (xiap)
Peptidases and inhibitors [BR:
gmh01002
]
Peptidase inhibitors
Family I32: IAP family
115552033 (xiap)
Ubiquitin system [BR:
gmh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115552033 (xiap)
Mitochondrial biogenesis [BR:
gmh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115552033 (xiap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
115552033
NCBI-ProteinID:
XP_030223599
Ensembl:
ENSGMOG00000003181
LinkDB
All DBs
Position
10:complement(21527977..21534195)
Genome browser
AA seq
470 aa
AA seq
DB search
MAQLSQNRDLETDGYMDWSHIKKREDSFLASEWAKQVSALKLARAGFYYTGSADRVQCFS
CRKTVENWCTGDQPVERHKEVSPSCQFLRCAHRAVANGLASNGTPYSEEEEDLQYRLRTG
EVVDETTYPMVPHMCSEDARLQTFQPWPSSAPVRPRALAQAGLFYLGEGDRVQCFCCAGM
MGGWEAGDTAWGEHSKHFANCFFILGHDVGNVPSQGGAAAEEEEEEEERVALRGSGVIPL
LSPSKPMGSFEERLESYAGIQHPIDSRMLASAGFYSTGGGDRVVCFQCGGGVKNWLPDEE
PWMEHAKHYPGCLFLLSEKGQDFVNQVQLQEPRRNGAASSQNGFSRQQNDVLKSEMAAAA
LAIGLDPVTVERTIRDKLCRTGSDYPSVEALIQDCLNNPATHSTSEEEDPSDILHRLQRE
KQCKICMDRDICMVFIPCGHLVSCSECSQSLGKCPICCASITQKVKTYIA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctttcacaaaacagagacctggagacggacggctacatggactggtcccac
atcaagaaacgcgaagactcgtttctggcctcagagtgggccaagcaggtgtctgcgctc
aagctggcccgggccgggttctactacacaggctctgccgaccgtgtccaatgcttcagc
tgtaggaagacggtggagaactggtgcacaggggaccagccggtagaaagacacaaagag
gtttctccctcgtgccagttcctcagatgcgcccaccgagctgttgcaaatggcctggcc
agcaacggcaccccctacagcgaggaggaggaagacctgcagtaccggctgaggacggga
gaggtggtcgacgagaccacctatcccatggtcccccacatgtgcagcgaggacgctcgc
ctgcagacgttccaaccgtggccctccagcgcccccgtgaggcccagggcgcttgcccag
gcaggcctcttctacctgggggagggagaccgggtgcagtgcttctgctgcgcgggcatg
atggggggctgggaggccggggacactgcgtggggggagcactccaaacactttgccaac
tgtttctttatcctcggtcacgacgtgggcaacgtgccgtcccagggaggagccgccgcc
gaggaagaggaggaggaggaggaaagggtggcgctaagggggagtggtgttataccactg
cttagccccagtaagccaatgggaagctttgaggagagactggagagctatgcagggatc
cagcatccgatcgactctaggatgctagccagtgctggcttctacagcacaggaggtgga
gaccgggttgtctgtttccaatgtgggggaggggtcaaaaactggctacctgatgaagaa
ccctggatggaacacgcaaaacactaccctggatgccttttcttgctgtcagaaaaggga
caggattttgtcaatcaagtgcagctacaggagccgcgacggaatggagctgcttcatcg
cagaatggcttttcaagacaacagaatgatgttctcaaatcggagatggccgcagcagct
ttggccataggtttggatcctgtaaccgtggagaggacgattcgtgataaactctgcagg
acgggatcggattaccccagcgtggaagcacttatccaagattgtctcaacaaccccgcg
actcattccacgtccgaagaagaggaccccagtgacatactccatcggcttcagagggag
aagcagtgtaagatttgtatggaccgagacatctgcatggttttcatcccttgtggtcat
ctggtgtcctgcagtgagtgctcccagtcactcggcaagtgtccaatctgctgtgcctcc
atcactcagaaggtcaagacctacattgcctaa
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